HHsearch alignment for GI: 254780401 and conserved domain: PRK06731

>PRK06731 flhF flagellar biosynthesis regulator FlhF; Validated.
Probab=95.36  E-value=0.033  Score=36.31  Aligned_cols=79  Identities=23%  Similarity=0.263  Sum_probs=48.0

Q ss_pred             EEEECCEEECCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCEEEECCCCCHHHHCCHHHH-HHH--CCCCCCCCC
Q ss_conf             89982300078887489999999985247315987604578777755871456788770421233-220--576346520
Q gi|254780401|r   46 VICVGGFVMGGTGKTPTALAIAKAVIDKNLKPGFLSRGYGRKSRISFRVDLEKHSAYDVGDEPLL-LAR--RAVTIVTSD  122 (338)
Q Consensus        46 VI~VGNitvGGtGKTP~v~~l~~~l~~~g~~~~ilsRGYg~~~~~~~~v~~~~~~~~~vGDEp~l-la~--~~pv~V~~~  122 (338)
T Consensus        78 I~lvG---~~G~GKTTT~AKLA~~~~~~~~kV~lia~D----------------tyR~aA~eQLk~~a~~l~v~~~~~~~  138 (270)
T PRK06731         78 IALIG---PTGVGKTTTLAKMAWQFHGKKKTVGFITTD----------------HSRIGTVQQLQDYVKTIGFEVIAVRD  138 (270)
T ss_pred             EEEEC---CCCCCHHHHHHHHHHHHHHCCCEEEEEEEC----------------CCCHHHHHHHHHHHHHHCCCEECCCC
T ss_conf             99988---898988999999999998679908999838----------------88888999999999981995354588


Q ss_pred             HHHHHHHH---C-CCCCCEEEECCC
Q ss_conf             12256641---0-245747997183
Q gi|254780401|r  123 RKIGVQML---L-QEGVDIIIMDDG  143 (338)
Q Consensus       123 R~~~~~~~---~-~~~~diiIlDDG  143 (338)
T Consensus       139 ~~~~~~~~~~~~~~~~~DvilIDTA  163 (270)
T PRK06731        139 EAAMTRALTYFKEEARVDYILIDTA  163 (270)
T ss_pred             HHHHHHHHHHHHHHCCCCEEEEECC
T ss_conf             7899999999999769999999799