HHsearch alignment for GI: 254780401 and conserved domain: PRK06731
>PRK06731 flhF flagellar biosynthesis regulator FlhF; Validated.
Probab=95.36 E-value=0.033 Score=36.31 Aligned_cols=79 Identities=23% Similarity=0.263 Sum_probs=48.0
Q ss_pred EEEECCEEECCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCEEEECCCCCHHHHCCHHHH-HHH--CCCCCCCCC
Q ss_conf 89982300078887489999999985247315987604578777755871456788770421233-220--576346520
Q gi|254780401|r 46 VICVGGFVMGGTGKTPTALAIAKAVIDKNLKPGFLSRGYGRKSRISFRVDLEKHSAYDVGDEPLL-LAR--RAVTIVTSD 122 (338)
Q Consensus 46 VI~VGNitvGGtGKTP~v~~l~~~l~~~g~~~~ilsRGYg~~~~~~~~v~~~~~~~~~vGDEp~l-la~--~~pv~V~~~ 122 (338)
T Consensus 78 I~lvG---~~G~GKTTT~AKLA~~~~~~~~kV~lia~D----------------tyR~aA~eQLk~~a~~l~v~~~~~~~ 138 (270)
T PRK06731 78 IALIG---PTGVGKTTTLAKMAWQFHGKKKTVGFITTD----------------HSRIGTVQQLQDYVKTIGFEVIAVRD 138 (270)
T ss_pred EEEEC---CCCCCHHHHHHHHHHHHHHCCCEEEEEEEC----------------CCCHHHHHHHHHHHHHHCCCEECCCC
T ss_conf 99988---898988999999999998679908999838----------------88888999999999981995354588
Q ss_pred HHHHHHHH---C-CCCCCEEEECCC
Q ss_conf 12256641---0-245747997183
Q gi|254780401|r 123 RKIGVQML---L-QEGVDIIIMDDG 143 (338)
Q Consensus 123 R~~~~~~~---~-~~~~diiIlDDG 143 (338)
T Consensus 139 ~~~~~~~~~~~~~~~~~DvilIDTA 163 (270)
T PRK06731 139 EAAMTRALTYFKEEARVDYILIDTA 163 (270)
T ss_pred HHHHHHHHHHHHHHCCCCEEEEECC
T ss_conf 7899999999999769999999799