HHsearch alignment for GI: 254780401 and conserved domain: PRK13849
>PRK13849 putative crown gall tumor protein VirC1; Provisional.
Probab=96.48 E-value=0.0093 Score=40.24 Aligned_cols=36 Identities=19% Similarity=0.443 Sum_probs=31.4
Q ss_pred CEEEECCEEECCCCCCHHHHHHHHHHHHCCCCEEEEE
Q ss_conf 8899823000788874899999999852473159876
Q gi|254780401|r 45 PVICVGGFVMGGTGKTPTALAIAKAVIDKNLKPGFLS 81 (338)
Q Consensus 45 pVI~VGNitvGGtGKTP~v~~l~~~l~~~g~~~~ils 81 (338)
T Consensus 2 ~vi~~~~~-KGG~GKtT~a~~la~~~~~~g~~v~~iD 37 (231)
T PRK13849 2 KLLTFCSF-KGGAGKTTALMGLCAALASDGKRVALFE 37 (231)
T ss_pred CEEEEEEC-CCCCCHHHHHHHHHHHHHHCCCEEEEEE
T ss_conf 37999618-9987699999999999997899599996