HHsearch alignment for GI: 254780401 and conserved domain: PRK13976

>PRK13976 thymidylate kinase; Provisional.
Probab=93.20  E-value=0.14  Score=31.97  Aligned_cols=77  Identities=21%  Similarity=0.201  Sum_probs=46.9

Q ss_pred             ECCCCCCHHHHHHHHHHHH-CCCCEEEEEECCCCCCCCCE----EEECCCCCHHHHCCHHHHHHHCCCCCCCCCHHHHHH
Q ss_conf             0788874899999999852-47315987604578777755----871456788770421233220576346520122566
Q gi|254780401|r   54 MGGTGKTPTALAIAKAVID-KNLKPGFLSRGYGRKSRISF----RVDLEKHSAYDVGDEPLLLARRAVTIVTSDRKIGVQ  128 (338)
Q Consensus        54 vGGtGKTP~v~~l~~~l~~-~g~~~~ilsRGYg~~~~~~~----~v~~~~~~~~~vGDEp~lla~~~pv~V~~~R~~~~~  128 (338)
T Consensus         8 iDGsGKsTq~~~L~~~L~~~~~~~~~~~trEPggt~~ge~IR~~ll~~~~~~~~---te~lLf~--------A~R~eh~~   76 (202)
T PRK13976          8 IDGSGKTTQSRLLAEYLSQIYGENNVVLTREPGGTSFNESVRGLLLSTKNLDKL---SELLLFI--------AMRREHFV   76 (202)
T ss_pred             CCCCCHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHCCCCCCHH---HHHHHHH--------HHHHHHHH
T ss_conf             999989999999999998606998689837999982789999997165579969---9999999--------99999999


Q ss_pred             HHCCC---CCCEEEEC
Q ss_conf             41024---57479971
Q gi|254780401|r  129 MLLQE---GVDIIIMD  141 (338)
Q Consensus       129 ~~~~~---~~diiIlD  141 (338)
T Consensus        77 ~~I~PaL~~g~~VI~D   92 (202)
T PRK13976         77 KVILPALTQGKIVICD   92 (202)
T ss_pred             HHHHHHHHCCCEEEEC
T ss_conf             9988888669989974