HHsearch alignment for GI: 254780401 and conserved domain: TIGR01969

>TIGR01969 minD_arch cell division ATPase MinD; InterPro: IPR010224 Proper placement of the bacterial cell division site requires the site-specific inactivation of other potential division sites. In Escherichia coli, selection of the correct mid-cell site is mediated by the MinC, MinD and MinE proteins. Several members of this family are found in archaeal genomes but their function is uncharacterised. More distantly related proteins include flagellar biosynthesis proteins and ParA chromosome partitioning proteins. This entry represents the archaeal MinD family. The exact roles of the various archaeal MinD homologs are unknown. .
Probab=93.68  E-value=0.035  Score=36.19  Aligned_cols=121  Identities=21%  Similarity=0.277  Sum_probs=71.3

Q ss_pred             CCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCC----CCCEEEEC---CCCCHHHHC----CHHHHHHHCCCCCCCCCH
Q ss_conf             7888748999999998524731598760457877----77558714---567887704----212332205763465201
Q gi|254780401|r   55 GGTGKTPTALAIAKAVIDKNLKPGFLSRGYGRKS----RISFRVDL---EKHSAYDVG----DEPLLLARRAVTIVTSDR  123 (338)
Q Consensus        55 GGtGKTP~v~~l~~~l~~~g~~~~ilsRGYg~~~----~~~~~v~~---~~~~~~~vG----DEp~lla~~~pv~V~~~R  123 (338)
T Consensus        10 GGtGKTT~tANLgVALA~~Gk~V~~~D---ADI~MANL~LiLgmE~~~VTLhDVL-AGeA~i~DAIY~gp~GnV~V~P--   83 (258)
T TIGR01969        10 GGTGKTTITANLGVALAKLGKKVLVLD---ADITMANLELILGMEDKPVTLHDVL-AGEADIKDAIYEGPEGNVKVIP--   83 (258)
T ss_pred             CCCCHHHEEEHHHHHHHHCCCEEEEEE---CCHHHHHHHHHHCCCCCCCCCCCCC-CCCCCHHHHCCCCCCCCEEEEC--
T ss_conf             898614000007788986097689994---6766776898844688896752213-4456100110028898447850--


Q ss_pred             HHHHHHHCC-CCCCEEEECCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHCCCCH
Q ss_conf             225664102-4574799718322344123069999618433566553761365210025566514544204412
Q gi|254780401|r  124 KIGVQMLLQ-EGVDIIIMDDGFHSADLQADFSLIVVNSHRGLGNGLVFPAGPLRVPLSRQLSYVDAILYVGNKK  196 (338)
Q Consensus       124 ~~~~~~~~~-~~~diiIlDDGfQh~~l~rdl~Ivl~d~~~~~gn~~llPaGpLREp~~~~l~rad~vi~~~~~~  196 (338)
T Consensus        84 --agvSLEg~rKA~~~~L~dV~--~~i~~~~D~lLIDA----------PAGL~~~a~~-Al~~a~elLLVvNPE  142 (258)
T TIGR01969        84 --AGVSLEGLRKADPDKLEDVL--KEIIDDTDFLLIDA----------PAGLERDAVT-ALAAADELLLVVNPE  142 (258)
T ss_pred             --CCCCHHHCCCCCHHHHHHHH--HHHHCCCCEEEEEC----------CCCCCHHHHH-HHHHCCCCEEEECCC
T ss_conf             --61221000126833328999--98720437788747----------8983378999-998618664866765