HHsearch alignment for GI: 254780401 and conserved domain: TIGR01969
>TIGR01969 minD_arch cell division ATPase MinD; InterPro: IPR010224 Proper placement of the bacterial cell division site requires the site-specific inactivation of other potential division sites. In Escherichia coli, selection of the correct mid-cell site is mediated by the MinC, MinD and MinE proteins. Several members of this family are found in archaeal genomes but their function is uncharacterised. More distantly related proteins include flagellar biosynthesis proteins and ParA chromosome partitioning proteins. This entry represents the archaeal MinD family. The exact roles of the various archaeal MinD homologs are unknown. .
Probab=93.68 E-value=0.035 Score=36.19 Aligned_cols=121 Identities=21% Similarity=0.277 Sum_probs=71.3
Q ss_pred CCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCC----CCCEEEEC---CCCCHHHHC----CHHHHHHHCCCCCCCCCH
Q ss_conf 7888748999999998524731598760457877----77558714---567887704----212332205763465201
Q gi|254780401|r 55 GGTGKTPTALAIAKAVIDKNLKPGFLSRGYGRKS----RISFRVDL---EKHSAYDVG----DEPLLLARRAVTIVTSDR 123 (338)
Q Consensus 55 GGtGKTP~v~~l~~~l~~~g~~~~ilsRGYg~~~----~~~~~v~~---~~~~~~~vG----DEp~lla~~~pv~V~~~R 123 (338)
T Consensus 10 GGtGKTT~tANLgVALA~~Gk~V~~~D---ADI~MANL~LiLgmE~~~VTLhDVL-AGeA~i~DAIY~gp~GnV~V~P-- 83 (258)
T TIGR01969 10 GGTGKTTITANLGVALAKLGKKVLVLD---ADITMANLELILGMEDKPVTLHDVL-AGEADIKDAIYEGPEGNVKVIP-- 83 (258)
T ss_pred CCCCHHHEEEHHHHHHHHCCCEEEEEE---CCHHHHHHHHHHCCCCCCCCCCCCC-CCCCCHHHHCCCCCCCCEEEEC--
T ss_conf 898614000007788986097689994---6766776898844688896752213-4456100110028898447850--
Q ss_pred HHHHHHHCC-CCCCEEEECCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHCCCCH
Q ss_conf 225664102-4574799718322344123069999618433566553761365210025566514544204412
Q gi|254780401|r 124 KIGVQMLLQ-EGVDIIIMDDGFHSADLQADFSLIVVNSHRGLGNGLVFPAGPLRVPLSRQLSYVDAILYVGNKK 196 (338)
Q Consensus 124 ~~~~~~~~~-~~~diiIlDDGfQh~~l~rdl~Ivl~d~~~~~gn~~llPaGpLREp~~~~l~rad~vi~~~~~~ 196 (338)
T Consensus 84 --agvSLEg~rKA~~~~L~dV~--~~i~~~~D~lLIDA----------PAGL~~~a~~-Al~~a~elLLVvNPE 142 (258)
T TIGR01969 84 --AGVSLEGLRKADPDKLEDVL--KEIIDDTDFLLIDA----------PAGLERDAVT-ALAAADELLLVVNPE 142 (258)
T ss_pred --CCCCHHHCCCCCHHHHHHHH--HHHHCCCCEEEEEC----------CCCCCHHHHH-HHHHCCCCEEEECCC
T ss_conf --61221000126833328999--98720437788747----------8983378999-998618664866765