HHsearch alignment for GI: 254780401 and conserved domain: cd00550
>cd00550 ArsA_ATPase Oxyanion-translocating ATPase (ArsA). This ATPase is involved in transport of arsenite, antimonite or other oxyanions across biological membranes in all three kingdoms of life. ArsA contains a highly conserved AAA motif present in the AAA+ ATPase superfamily associated with a variety of cellular activities. To form a functional ATP-driven pump, ArsA interacts with the permease ArsB, which is a channel-forming integral membrane protein. One of the most interesting features of ArsA is the allosteric activation by its transport substrates. A divalent cation, typically Mg2+, is required for its enzymatic activity.
Probab=94.51 E-value=0.034 Score=36.21 Aligned_cols=28 Identities=32% Similarity=0.395 Sum_probs=26.9
Q ss_pred CCCCCCHHHHHHHHHHHHCCCCEEEEEE
Q ss_conf 7888748999999998524731598760
Q gi|254780401|r 55 GGTGKTPTALAIAKAVIDKNLKPGFLSR 82 (338)
Q Consensus 55 GGtGKTP~v~~l~~~l~~~g~~~~ilsR 82 (338)
T Consensus 9 GGVGKTT~AaalA~~lA~~G~kVLlvst 36 (254)
T cd00550 9 GGVGKTTISAATAVRLAEQGKKVLLVST 36 (254)
T ss_pred CCCCHHHHHHHHHHHHHHCCCEEEEEEC
T ss_conf 8554899999999999968994999958