HHsearch alignment for GI: 254780401 and conserved domain: pfam03308
>pfam03308 ArgK ArgK protein. The ArgK protein acts as an ATPase enzyme and as a kinase, and phosphorylates periplasmic binding proteins involved in the LAO (lysine, arginine, ornithine)/AO transport systems.
Probab=91.18 E-value=0.85 Score=26.29 Aligned_cols=130 Identities=20% Similarity=0.241 Sum_probs=77.4
Q ss_pred EEECCEEECCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCEEEECCCC--CHHHHCCHHHHHHH--CC-------
Q ss_conf 99823000788874899999999852473159876045787777558714567--88770421233220--57-------
Q gi|254780401|r 47 ICVGGFVMGGTGKTPTALAIAKAVIDKNLKPGFLSRGYGRKSRISFRVDLEKH--SAYDVGDEPLLLAR--RA------- 115 (338)
Q Consensus 47 I~VGNitvGGtGKTP~v~~l~~~l~~~g~~~~ilsRGYg~~~~~~~~v~~~~~--~~~~vGDEp~lla~--~~------- 115 (338)
T Consensus 30 ~~iGiTG~PGaGKStli~~l~~~~~~~g~~vaVlA------------vDPSS~~sgGaiLGDr~RM~~~~~~~~vfiRs~ 97 (267)
T pfam03308 30 HRVGITGVPGAGKSTLIEALGMELRRRGHRVAVLA------------VDPSSPFTGGSILGDRTRMQRLAVDPGAFIRSS 97 (267)
T ss_pred EEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEE------------ECCCCCCCCCCCCCCHHHHHHHCCCCCEEEEEC
T ss_conf 59987689988799999999999996898689999------------789998888630010777765058998588645
Q ss_pred -----CCCCCCCHHHHHHHHCCCCCCEEEECC---CCCCCCCCC--EEEEEEECCCCCCCCCC-CCCCHHHHHCCHHHHH
Q ss_conf -----634652012256641024574799718---322344123--06999961843356655-3761365210025566
Q gi|254780401|r 116 -----VTIVTSDRKIGVQMLLQEGVDIIIMDD---GFHSADLQA--DFSLIVVNSHRGLGNGL-VFPAGPLRVPLSRQLS 184 (338)
Q Consensus 116 -----pv~V~~~R~~~~~~~~~~~~diiIlDD---GfQh~~l~r--dl~Ivl~d~~~~~gn~~-llPaGpLREp~~~~l~ 184 (338)
T Consensus 98 ~srg~lGGls~~t~~~i~lleaaGfD~IivETVGVGQsE~~v~~~aD~~llv~~--Pg~GDeiQ~iKaG--------ImE 167 (267)
T pfam03308 98 PSRGALGGLSRATREAILLLDAAGFDVIIIETVGVGQSEVDIANMADTFVLVTI--PGGGDDLQGIKAG--------LME 167 (267)
T ss_pred CCCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHCCEEEEEEC--CCCCHHHHHHHHH--------HHH
T ss_conf 778888871476999999999779999999247777530355541576899955--8876088898753--------765
Q ss_pred HHHHHHHCCCCHHH
Q ss_conf 51454420441245
Q gi|254780401|r 185 YVDAILYVGNKKNV 198 (338)
Q Consensus 185 rad~vi~~~~~~~~ 198 (338)
T Consensus 168 iaDi~vVNKaD~~~ 181 (267)
T pfam03308 168 IADIYVVNKADLPG 181 (267)
T ss_pred HCCEEEEECCCHHH
T ss_conf 35489996676476