HHsearch alignment of GI: 254780401 and MMDB domain: 1qzx_A_98-290

>1qzx_A (A:98-290) SRP54, signal recognition 54 kDa protein; signal recognition particle, protein targeting, signaling protein; 4.00A {Sulfolobus solfataricus}
Probab=94.90  E-value=0.027  Score=36.48  Aligned_cols=82  Identities=23%  Similarity=0.220  Sum_probs=48.7

Q ss_pred             CCEEEECCEEECCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCEEEECCCCCHHHHC-CHHHHHHHC------CC
Q ss_conf             98899823000788874899999999852473159876045787777558714567887704-212332205------76
Q gi|254780401|r   44 IPVICVGGFVMGGTGKTPTALAIAKAVIDKNLKPGFLSRGYGRKSRISFRVDLEKHSAYDVG-DEPLLLARR------AV  116 (338)
Q Consensus        44 ~pVI~VGNitvGGtGKTP~v~~l~~~l~~~g~~~~ilsRGYg~~~~~~~~v~~~~~~~~~vG-DEp~lla~~------~p  116 (338)
                      .+||.+.-  .+|+|||-++..|+.+|+++|+++++++---++                 .| |+-+.....      .+
T Consensus         7 ~~vi~itG--~~GsGKTT~~~~L~~~l~~~g~~v~~i~~D~~~-----------------~~~~~~l~~~~~~~~~~~~~   67 (193)
T 1qzx_A            7 PFIIMLVG--VQGSGKTTTAGKLAYFYKKRGYKVGLVAADVYR-----------------PAAYDQLLQLGNQIGVQVYG   67 (193)
T ss_dssp             SEEEEEEC--SSSSSTTTHHHHHHHHHHHTTCCEEEEECCTTS-----------------THHHHHHHHHHHHTTCEEEC
T ss_pred             CEEEEEEC--CCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCC-----------------CCHHHHHHHHHCCCCEEEEC
T ss_conf             85999975--778884204999999998659830477426557-----------------54788899997037714731


Q ss_pred             CCCCCCHHHHHH----HHCCCCCCEEEECCCC
Q ss_conf             346520122566----4102457479971832
Q gi|254780401|r  117 TIVTSDRKIGVQ----MLLQEGVDIIIMDDGF  144 (338)
Q Consensus       117 v~V~~~R~~~~~----~~~~~~~diiIlDDGf  144 (338)
                      ...+.++....+    .+.....|+++.|-..
T Consensus        68 ~~~~~~~~~~~~~~~~~~~~~~~d~v~~~t~g   99 (193)
T 1qzx_A           68 EPNNQNPIEIAKKGVDIFVKNKMDIIIVDTAG   99 (193)
T ss_dssp             CTTCCCHHHHHHHHHHHHHHTTCSEEEEECCC
T ss_pred             CCCCCCHHHHHHHHHHHHHHCCCCEEEEECCC
T ss_conf             55556778899999998751489889987777