HHsearch alignment of GI: 254780401 and MMDB domain: 1qzx_A_98-290
>1qzx_A (A:98-290) SRP54, signal recognition 54 kDa protein; signal recognition particle, protein targeting, signaling protein; 4.00A {Sulfolobus solfataricus}
Probab=94.90 E-value=0.027 Score=36.48 Aligned_cols=82 Identities=23% Similarity=0.220 Sum_probs=48.7
Q ss_pred CCEEEECCEEECCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCEEEECCCCCHHHHC-CHHHHHHHC------CC
Q ss_conf 98899823000788874899999999852473159876045787777558714567887704-212332205------76
Q gi|254780401|r 44 IPVICVGGFVMGGTGKTPTALAIAKAVIDKNLKPGFLSRGYGRKSRISFRVDLEKHSAYDVG-DEPLLLARR------AV 116 (338)
Q Consensus 44 ~pVI~VGNitvGGtGKTP~v~~l~~~l~~~g~~~~ilsRGYg~~~~~~~~v~~~~~~~~~vG-DEp~lla~~------~p 116 (338)
.+||.+.- .+|+|||-++..|+.+|+++|+++++++---++ .| |+-+..... .+
T Consensus 7 ~~vi~itG--~~GsGKTT~~~~L~~~l~~~g~~v~~i~~D~~~-----------------~~~~~~l~~~~~~~~~~~~~ 67 (193)
T 1qzx_A 7 PFIIMLVG--VQGSGKTTTAGKLAYFYKKRGYKVGLVAADVYR-----------------PAAYDQLLQLGNQIGVQVYG 67 (193)
T ss_dssp SEEEEEEC--SSSSSTTTHHHHHHHHHHHTTCCEEEEECCTTS-----------------THHHHHHHHHHHHTTCEEEC
T ss_pred CEEEEEEC--CCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCC-----------------CCHHHHHHHHHCCCCEEEEC
T ss_conf 85999975--778884204999999998659830477426557-----------------54788899997037714731
Q ss_pred CCCCCCHHHHHH----HHCCCCCCEEEECCCC
Q ss_conf 346520122566----4102457479971832
Q gi|254780401|r 117 TIVTSDRKIGVQ----MLLQEGVDIIIMDDGF 144 (338)
Q Consensus 117 v~V~~~R~~~~~----~~~~~~~diiIlDDGf 144 (338)
...+.++....+ .+.....|+++.|-..
T Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~d~v~~~t~g 99 (193)
T 1qzx_A 68 EPNNQNPIEIAKKGVDIFVKNKMDIIIVDTAG 99 (193)
T ss_dssp CTTCCCHHHHHHHHHHHHHHTTCSEEEEECCC
T ss_pred CCCCCCHHHHHHHHHHHHHHCCCCEEEEECCC
T ss_conf 55556778899999998751489889987777