HHsearch results for GI: 254780401 and protein with PDBid: 2www_A
>2www_A Methylmalonic aciduria type A protein, mitochondrial; transport protein, disease mutation, mitochondrion, nucleotide-binding; HET: GDP 2PE; 2.64A {Homo sapiens}
Probab=93.65 E-value=0.33 Score=27.72 Aligned_cols=139 Identities=14% Similarity=0.156 Sum_probs=79.9
Q ss_pred CCCCCEEEECCEEECCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCEEEECCCCCHHHHCCHHHHHHHC-CC---
Q ss_conf 38898899823000788874899999999852473159876045787777558714567887704212332205-76---
Q gi|254780401|r 41 HAPIPVICVGGFVMGGTGKTPTALAIAKAVIDKNLKPGFLSRGYGRKSRISFRVDLEKHSAYDVGDEPLLLARR-AV--- 116 (338)
Q Consensus 41 ~~~~pVI~VGNitvGGtGKTP~v~~l~~~l~~~g~~~~ilsRGYg~~~~~~~~v~~~~~~~~~vGDEp~lla~~-~p--- 116 (338)
.....+|+|.- ..|+|||-++..|++.+.++|++++||.--=-+.. +.-.--||---|.... .|
T Consensus 71 ~~~a~~IGitG--~PGaGKStli~~l~~~~~~~g~~vaVla~Dpss~~----------~gg~llgdriRm~~~~~~~~~~ 138 (349)
T 2www_A 71 KPLAFRVGLSG--PPGAGKSTFIEYFGKMLTERGHKLSVLAVDPSSCT----------SGGSLLGDKTRMTELSRDMNAY 138 (349)
T ss_dssp CCSCEEEEEEC--CTTSSHHHHHHHHHHHHHHTTCCEEEEECCC--------------------------CCSTTCTTEE
T ss_pred CCCEEEEEECC--CCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCHH----------HHHHHHHCCCCEEECCCCCCCC
T ss_conf 88705886217--99988999999999999847971789957878662----------6888775388469635787631
Q ss_pred ----------CCCCCCHHHHHHHHCCCCCCEEEECCC--CCC---CCCCCEEEEEEECCCCCCCCCCCCCCHHHHHCCHH
Q ss_conf ----------346520122566410245747997183--223---44123069999618433566553761365210025
Q gi|254780401|r 117 ----------TIVTSDRKIGVQMLLQEGVDIIIMDDG--FHS---ADLQADFSLIVVNSHRGLGNGLVFPAGPLRVPLSR 181 (338)
Q Consensus 117 ----------v~V~~~R~~~~~~~~~~~~diiIlDDG--fQh---~~l~rdl~Ivl~d~~~~~gn~~llPaGpLREp~~~ 181 (338)
--++..=..++..+...+.|+|+..-. .|. ...--|+-+++++.. .|--+|+ + ...
T Consensus 139 ir~~~~~~~~gg~~~~~~~~i~llea~G~D~i~iEtvG~gq~e~~~~~~ad~~v~v~~p~----~Gd~~q~----~-k~g 209 (349)
T 2www_A 139 IRPSPTRGTLGGVTRTTNEAILLCEGAGYDIILIETVGVGQSEFAVADMVDMFVLLLPPA----GGDELQG----I-KRG 209 (349)
T ss_dssp EECC---------CTTHHHHHHHHHHTTCSEEEEECCCC--CHHHHHTTCSEEEEEECCC--------------------
T ss_pred CCCCHHHHHHCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCEECCCCEEEEEECCC----CCCHHHH----H-HCC
T ss_conf 266644442111025479999987406998699985366502543322665466873367----6422545----4-016
Q ss_pred HHHHHHHHHHCCCCHHHHH
Q ss_conf 5665145442044124577
Q gi|254780401|r 182 QLSYVDAILYVGNKKNVIS 200 (338)
Q Consensus 182 ~l~rad~vi~~~~~~~~~~ 200 (338)
-+..||++++||.+.....
T Consensus 210 i~EiADiiVVNKaD~~~~~ 228 (349)
T 2www_A 210 IIEMADLVAVTKSDGDLIV 228 (349)
T ss_dssp -CCSCSEEEECCCSGGGHH
T ss_pred CEECCCEEEEECCCCCCHH
T ss_conf 1022207888156763367