HHsearch results for GI: 254780401 and protein with PDBid: 3b9q_A
>3b9q_A Chloroplast SRP receptor homolog, alpha subunit CPFTSY; protein translocation, GTP-binding, nucleotide-binding, protein transport; 1.75A {Arabidopsis thaliana}
Probab=95.56 E-value=0.012 Score=37.86 Aligned_cols=99 Identities=19% Similarity=0.289 Sum_probs=58.7
Q ss_pred EEEECCEEECCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCEEEECCCCCHHHHCCHHHH-HHH--CCCCCCCCC
Q ss_conf 89982300078887489999999985247315987604578777755871456788770421233-220--576346520
Q gi|254780401|r 46 VICVGGFVMGGTGKTPTALAIAKAVIDKNLKPGFLSRGYGRKSRISFRVDLEKHSAYDVGDEPLL-LAR--RAVTIVTSD 122 (338)
Q Consensus 46 VI~VGNitvGGtGKTP~v~~l~~~l~~~g~~~~ilsRGYg~~~~~~~~v~~~~~~~~~vGDEp~l-la~--~~pv~V~~~ 122 (338)
+..|| +-|+|||-++.-||.+++.+|+++++++= ++..-.+=|-+. .+. .+|++++.+
T Consensus 103 i~~vG---~~G~GKTTTiaKLA~~~~~~~~kv~lva~----------------Dt~R~aA~eQL~~~a~~~~v~~~~~~~ 163 (302)
T 3b9q_A 103 IMIVG---VNGGGKTTSLGKLAHRLKNEGTKVLMAAG----------------DTFRAAASDQLEIWAERTGCEIVVAEG 163 (302)
T ss_dssp EEEEC---CTTSCHHHHHHHHHHHHHHTTCCEEEECC----------------CCSCHHHHHHHHHHHHHHTCEEECCC-
T ss_pred EEEEC---CCCCCHHHHHHHHHHHHHHCCCCCCEECC----------------CCCCHHHHHHHHHHHHHCCCCEEEECC
T ss_conf 99757---98886774999999999976998732115----------------657877999999998642653033036
Q ss_pred H--------HHHHHHHCCCCCCEEEECCC-CCCCC-------------C------CCEEEEEEECCCCC
Q ss_conf 1--------22566410245747997183-22344-------------1------23069999618433
Q gi|254780401|r 123 R--------KIGVQMLLQEGVDIIIMDDG-FHSAD-------------L------QADFSLIVVNSHRG 163 (338)
Q Consensus 123 R--------~~~~~~~~~~~~diiIlDDG-fQh~~-------------l------~rdl~Ivl~d~~~~ 163 (338)
. ..+.+.+...++|+||.|-+ -.|.. + .++-.++++|+..+
T Consensus 164 ~~~~~~~~~~~~~~~a~~~~~D~ilIDTaGR~~~~~~lm~el~~i~~~~~k~~~~~p~e~~LVlda~~g 232 (302)
T 3b9q_A 164 DKAKAATVLSKAVKRGKEEGYDVVLCDTSGRLHTNYSLMEELIACKKAVGKIVSGAPNEILLVLDGNTG 232 (302)
T ss_dssp -CCCHHHHHHHHHHHHHHTTCSEEEECCCCCSSCCHHHHHHHHHHHHHHHTTSTTCCSEEEEEEEGGGG
T ss_pred CCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCC
T ss_conf 520688999999999997799999984888785658899999999999861268898568998405668