HHSEARCH alignment of GI: 254780401 and SCOP domain: d1ls1a2

Alignment
>d1ls1a2 c.37.1.10 (A:89-295) GTPase domain of the signal sequence recognition protein Ffh {Thermus aquaticus [TaxId: 271]}
Probab=95.02  E-value=0.012  Score=36.22  Aligned_cols=28  Identities=32%  Similarity=0.425  Sum_probs=26.3

Q ss_pred             ECCCCCCHHHHHHHHHHHHCCCCEEEEE
Q ss_conf             0788874899999999852473159876
Q gi|254780401|r   54 MGGTGKTPTALAIAKAVIDKNLKPGFLS   81 (338)
Q Consensus        54 vGGtGKTP~v~~l~~~l~~~g~~~~ils   81 (338)
                      ..|+|||-++.-||.+++++|++|++++
T Consensus        18 p~GvGKTTTiaKLA~~~~~~g~kV~lit   45 (207)
T d1ls1a2          18 LQGSGKTTTAAKLALYYKGKGRRPLLVA   45 (207)
T ss_dssp             CTTTTHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred             CCCCCHHHHHHHHHHHHHHCCCCEEEEE
T ss_conf             9999889999999999997799279995


SCOP domain information

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: GTPase domain of the signal sequence recognition protein Ffh
species: Thermus aquaticus [TaxId: 271]