HHSEARCH alignment of GI: 254780401 and SCOP domain: d2p67a1

Alignment
>d2p67a1 c.37.1.10 (A:1-327) LAO/AO transport system kinase ArgK {Escherichia coli [TaxId: 562]}
Probab=90.64  E-value=0.19  Score=27.72  Aligned_cols=134  Identities=14%  Similarity=0.152  Sum_probs=73.5

Q ss_pred             CCCEEEECCEEECCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCEEEECCCCCHHHHCCHHHHHHHC--CCCC--
Q ss_conf             898899823000788874899999999852473159876045787777558714567887704212332205--7634--
Q gi|254780401|r   43 PIPVICVGGFVMGGTGKTPTALAIAKAVIDKNLKPGFLSRGYGRKSRISFRVDLEKHSAYDVGDEPLLLARR--AVTI--  118 (338)
Q Consensus        43 ~~pVI~VGNitvGGtGKTP~v~~l~~~l~~~g~~~~ilsRGYg~~~~~~~~v~~~~~~~~~vGDEp~lla~~--~pv~--  118 (338)
                      ..++|+|  .=..|+|||-++..|++.+.+.|.+++|+.=.=.+..          +...-.||.-.|-...  ..++  
T Consensus        53 ~~~~Igi--tG~pGaGKSTLi~~l~~~~~~~g~~vavlavDpss~~----------~ggailgdr~rm~~~~~~~~~~ir  120 (327)
T d2p67a1          53 NTLRLGV--TGTPGAGKSTFLEAFGMLLIREGLKVAVIAVDPSSPV----------TGGSILGDKTRMNDLARAEAAFIR  120 (327)
T ss_dssp             CSEEEEE--EECTTSCHHHHHHHHHHHHHHTTCCEEEEEECCC-------------------------CTTTTCTTEEEE
T ss_pred             CCEEEEE--ECCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCEEE----------ECCCCCCCHHHHHHHCCCCCCCCC
T ss_conf             8328974--3899998999999999999756983322037776100----------065155413678874056541015


Q ss_pred             ----------CCCCHHHHHHHHCCCCCCEEEECC---CCCCCCC--CCEEEEEEECCCCCCCCC-CCCCCHHHHHCCHHH
Q ss_conf             ----------652012256641024574799718---3223441--230699996184335665-537613652100255
Q gi|254780401|r  119 ----------VTSDRKIGVQMLLQEGVDIIIMDD---GFHSADL--QADFSLIVVNSHRGLGNG-LVFPAGPLRVPLSRQ  182 (338)
Q Consensus       119 ----------V~~~R~~~~~~~~~~~~diiIlDD---GfQh~~l--~rdl~Ivl~d~~~~~gn~-~llPaGpLREp~~~~  182 (338)
                                ++..=..++..+...+.|+|+..-   |-.-..+  .-|.-+++++..  .|.. +.+=+|-        
T Consensus       121 ~~~~~g~lgg~~~~~~~~~~~~~~~g~d~iliEtvG~gq~e~~i~~~aD~~l~v~~P~--~Gd~iq~~k~gi--------  190 (327)
T d2p67a1         121 PVPSSGHLGGASQRARELMLLCEAAGYDVVIVETVGVGQSETEVARMVDCFISLQIAG--GGDDLQGIKKGL--------  190 (327)
T ss_dssp             EECC-----CHHHHHHHHHHHHHHTTCSEEEEEEECCTTHHHHHHTTCSEEEEEECC--------CCCCHHH--------
T ss_pred             CCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHCCCEEEEEECCC--CCHHHHHHCHHH--------
T ss_conf             6555344442033205789998864998278750321121023440354389973688--725555422014--------


Q ss_pred             HHHHHHHHHCCCCHHH
Q ss_conf             6651454420441245
Q gi|254780401|r  183 LSYVDAILYVGNKKNV  198 (338)
Q Consensus       183 l~rad~vi~~~~~~~~  198 (338)
                      +..||++++||.+...
T Consensus       191 ~e~aDi~VvNKaD~~~  206 (327)
T d2p67a1         191 MEVADLIVINKDDGDN  206 (327)
T ss_dssp             HHHCSEEEECCCCTTC
T ss_pred             HCCCCEEEEEEECCCC
T ss_conf             2015579998622554


SCOP domain information

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: LAO/AO transport system kinase ArgK
species: Escherichia coli [TaxId: 562]