HHSEARCH alignment of GI: 254780401 and SCOP domain: d2qy9a2

Alignment
>d2qy9a2 c.37.1.10 (A:285-495) GTPase domain of the signal recognition particle receptor FtsY {Escherichia coli [TaxId: 562]}
Probab=95.52  E-value=0.008  Score=37.48  Aligned_cols=79  Identities=18%  Similarity=0.244  Sum_probs=48.5

Q ss_pred             EEEECCEEECCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCEEEECCCCCHHHHCCHHH-HHHH--CCCCCCCCC
Q ss_conf             8998230007888748999999998524731598760457877775587145678877042123-3220--576346520
Q gi|254780401|r   46 VICVGGFVMGGTGKTPTALAIAKAVIDKNLKPGFLSRGYGRKSRISFRVDLEKHSAYDVGDEPL-LLAR--RAVTIVTSD  122 (338)
Q Consensus        46 VI~VGNitvGGtGKTP~v~~l~~~l~~~g~~~~ilsRGYg~~~~~~~~v~~~~~~~~~vGDEp~-lla~--~~pv~V~~~  122 (338)
                      +.-||-   =|+|||-++.-||.+++++|.+|++++                .++..-.+=|-+ .+++  ..|+.+..+
T Consensus        12 i~lvGp---tGvGKTTTiAKLA~~~~~~g~kV~lit----------------~Dt~R~gA~eQL~~~a~~l~v~~~~~~~   72 (211)
T d2qy9a2          12 ILMVGV---NGVGKTTTIGKLARQFEQQGKSVMLAA----------------GDTFRAAAVEQLQVWGQRNNIPVIAQHT   72 (211)
T ss_dssp             EEEECC---TTSCHHHHHHHHHHHHHTTTCCEEEEC----------------CCTTCHHHHHHHHHHHHHTTCCEECCST
T ss_pred             EEEECC---CCCCHHHHHHHHHHHHHHCCCCEEEEE----------------CCCCCCCCHHHHHHHHHHCCCCCCCCCC
T ss_conf             999899---999989999999999997799479982----------------3213666120455543433886211356


Q ss_pred             HHHHHHHH-------CCCCCCEEEECCC
Q ss_conf             12256641-------0245747997183
Q gi|254780401|r  123 RKIGVQML-------LQEGVDIIIMDDG  143 (338)
Q Consensus       123 R~~~~~~~-------~~~~~diiIlDDG  143 (338)
                      ..+-...+       ...+.|+|+.|=.
T Consensus        73 ~~d~~~~l~~~~~~a~~~~~d~ilIDTa  100 (211)
T d2qy9a2          73 GADSASVIFDAIQAAKARNIDVLIADTA  100 (211)
T ss_dssp             TCCHHHHHHHHHHHHHHTTCSEEEECCC
T ss_pred             CCCHHHHHHHHHHHHHHCCCCEEEECCC
T ss_conf             8779999999999998769988996568


SCOP domain information

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: GTPase domain of the signal recognition particle receptor FtsY
species: Escherichia coli [TaxId: 562]