Query gi|254780401|ref|YP_003064814.1| tetraacyldisaccharide 4'-kinase [Candidatus Liberibacter asiaticus str. psy62] Match_columns 338 No_of_seqs 164 out of 1985 Neff 6.7 Searched_HMMs 13730 Date Wed Jun 1 05:24:14 2011 Command /home/congqian_1/programs/hhpred/hhsearch -i 254780401.hhm -d /home/congqian_1/database/scop/scop70_1_75.hhm No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM 1 d1nija1 c.37.1.10 (A:2-223) Hy 96.7 0.00019 1.4E-08 48.9 1.1 137 43-196 2-161 (222) 2 d1j8yf2 c.37.1.10 (F:87-297) G 96.3 0.0027 1.9E-07 40.8 4.8 81 44-143 11-103 (211) 3 d1np6a_ c.37.1.10 (A:) Molybdo 95.8 0.008 5.8E-07 37.5 5.3 41 44-86 2-42 (170) 4 d1xjca_ c.37.1.10 (A:) Molybdo 95.7 0.0062 4.5E-07 38.3 4.4 39 46-86 3-41 (165) 5 d2qy9a2 c.37.1.10 (A:285-495) 95.5 0.008 5.8E-07 37.5 4.5 79 46-143 12-100 (211) 6 d1vmaa2 c.37.1.10 (A:82-294) G 95.4 0.0091 6.7E-07 37.1 4.4 79 46-143 14-102 (213) 7 d1okkd2 c.37.1.10 (D:97-303) G 95.3 0.008 5.8E-07 37.5 3.9 80 46-144 9-98 (207) 8 d1ihua1 c.37.1.10 (A:1-296) Ar 95.1 0.0071 5.2E-07 37.8 3.2 29 54-82 16-44 (296) 9 d1ls1a2 c.37.1.10 (A:89-295) G 95.0 0.012 8.7E-07 36.2 4.1 28 54-81 18-45 (207) 10 d1g3qa_ c.37.1.10 (A:) Cell di 94.9 0.013 9.3E-07 36.0 4.0 36 45-81 3-38 (237) 11 d1cp2a_ c.37.1.10 (A:) Nitroge 94.4 0.019 1.4E-06 34.8 3.9 35 46-82 3-37 (269) 12 d2gc6a2 c.72.2.2 (A:1-296) Fol 94.4 0.18 1.3E-05 27.8 9.0 109 30-148 26-150 (296) 13 d1o5za2 c.72.2.2 (A:-2-293) Fo 94.3 0.14 9.8E-06 28.7 8.0 110 33-147 33-152 (296) 14 d1ihua2 c.37.1.10 (A:308-586) 94.3 0.014 1E-06 35.7 3.0 32 54-85 28-59 (279) 15 d2afhe1 c.37.1.10 (E:1-289) Ni 93.8 0.031 2.3E-06 33.3 4.0 34 46-81 4-37 (289) 16 d1gm5a3 c.37.1.19 (A:286-549) 93.1 0.013 9.1E-07 36.1 1.0 102 55-168 113-221 (264) 17 d1byia_ c.37.1.10 (A:) Dethiob 92.7 0.037 2.7E-06 32.7 3.0 27 54-80 9-36 (224) 18 d2eyqa3 c.37.1.19 (A:546-778) 92.6 0.041 3E-06 32.4 3.1 101 54-168 84-193 (233) 19 d1hyqa_ c.37.1.10 (A:) Cell di 92.5 0.042 3E-06 32.4 3.0 36 45-81 2-37 (232) 20 d1a7ja_ c.37.1.6 (A:) Phosphor 91.5 0.11 7.9E-06 29.4 4.2 38 43-82 3-40 (288) 21 d2qm8a1 c.37.1.10 (A:5-327) Me 91.2 0.16 1.1E-05 28.3 4.8 133 43-196 50-201 (323) 22 d2p67a1 c.37.1.10 (A:1-327) LA 90.6 0.19 1.4E-05 27.7 4.8 134 43-198 53-206 (327) 23 d1yrba1 c.37.1.10 (A:1-244) AT 90.1 0.054 4E-06 31.6 1.6 36 47-86 4-39 (244) 24 d1gkub1 c.37.1.16 (B:1-250) He 88.9 0.43 3.1E-05 25.2 5.5 95 54-162 66-172 (237) 25 d1gsia_ c.37.1.1 (A:) Thymidyl 88.8 0.23 1.7E-05 27.1 4.0 30 49-81 6-35 (208) 26 d4tmka_ c.37.1.1 (A:) Thymidyl 88.3 0.21 1.5E-05 27.4 3.5 33 54-86 10-42 (210) 27 d2jfga3 c.72.2.1 (A:94-297) UD 88.1 0.35 2.5E-05 25.8 4.6 36 42-81 9-44 (204) 28 d1khta_ c.37.1.1 (A:) Adenylat 87.8 0.14 1E-05 28.7 2.4 29 55-83 10-38 (190) 29 d2i3ba1 c.37.1.11 (A:1-189) Ca 87.1 0.18 1.3E-05 27.9 2.6 28 55-82 10-37 (189) 30 d1nksa_ c.37.1.1 (A:) Adenylat 84.3 0.3 2.2E-05 26.3 2.6 28 56-83 11-38 (194) 31 d1bifa1 c.37.1.7 (A:37-249) 6- 83.3 0.35 2.5E-05 25.8 2.6 35 46-83 5-39 (213) 32 d1nn5a_ c.37.1.1 (A:) Thymidyl 83.3 0.43 3.1E-05 25.2 3.1 30 55-85 12-41 (209) 33 d1odfa_ c.37.1.6 (A:) Hypothet 82.6 1.5 0.00011 21.3 6.2 88 22-118 5-97 (286) 34 d1f0ka_ c.87.1.2 (A:) Peptidog 79.7 0.72 5.2E-05 23.6 3.2 33 53-85 6-39 (351) 35 d1nlfa_ c.37.1.11 (A:) Hexamer 77.4 2.2 0.00016 20.2 6.4 48 50-102 29-80 (274) 36 d1rz3a_ c.37.1.6 (A:) Hypothet 75.9 1 7.5E-05 22.5 3.1 41 41-83 18-59 (198) 37 g1qhh.1 c.37.1.19 (A:,B:,C:,D: 75.5 1.4 0.0001 21.5 3.7 39 43-86 24-66 (623) 38 d1osna_ c.37.1.1 (A:) Thymidin 75.1 1.4 0.0001 21.5 3.6 33 46-81 8-40 (331) 39 d1sq5a_ c.37.1.6 (A:) Pantothe 75.0 2.5 0.00018 19.7 8.3 45 39-84 74-121 (308) 40 d1p3da3 c.72.2.1 (A:107-321) U 74.9 0.99 7.2E-05 22.6 2.8 36 45-84 13-48 (215) 41 d1gg4a4 c.72.2.1 (A:99-312) UD 74.2 1 7.5E-05 22.5 2.7 33 43-79 1-33 (214) 42 d1j6ua3 c.72.2.1 (A:89-295) UD 73.7 2.2 0.00016 20.2 4.3 38 43-84 13-50 (207) 43 d1e8ca3 c.72.2.1 (A:104-337) U 73.7 1.5 0.00011 21.3 3.5 34 44-81 5-38 (234) 44 d1cr2a_ c.37.1.11 (A:) Gene 4 73.1 1.3 9.8E-05 21.7 3.1 32 50-81 35-71 (277) 45 d1fnna2 c.37.1.20 (A:1-276) CD 72.2 1.9 0.00014 20.5 3.7 35 42-79 42-76 (276) 46 d1hjsa_ c.1.8.3 (A:) Beta-1,4- 71.5 2.8 0.0002 19.4 4.4 44 246-289 206-251 (332) 47 d1qvra3 c.37.1.20 (A:536-850) 71.5 2.6 0.00019 19.7 4.2 22 55-76 62-83 (315) 48 d1l8qa2 c.37.1.20 (A:77-289) C 71.1 1.6 0.00012 21.1 3.1 35 44-81 37-71 (213) 49 d1z63a1 c.37.1.19 (A:432-661) 70.7 3.1 0.00023 19.1 4.8 20 55-74 40-59 (230) 50 d2piaa2 c.25.1.2 (A:104-223) P 70.6 1.1 8.1E-05 22.2 2.2 39 44-89 9-47 (120) 51 d1g5ta_ c.37.1.11 (A:) ATP:cor 69.8 3.3 0.00024 18.9 5.2 33 53-86 9-41 (157) 52 d1ep3b2 c.25.1.3 (B:103-262) D 69.4 1.2 8.9E-05 21.9 2.2 28 52-80 13-40 (160) 53 d1tf7a2 c.37.1.11 (A:256-497) 68.9 1.9 0.00014 20.6 3.1 27 55-81 35-61 (242) 54 d2i3da1 c.69.1.36 (A:2-219) Hy 68.8 3.1 0.00022 19.1 4.1 47 42-88 24-71 (218) 55 d1qyca_ c.2.1.2 (A:) Phenylcou 68.7 2.2 0.00016 20.2 3.4 33 52-86 7-39 (307) 56 d1jaya_ c.2.1.6 (A:) Coenzyme 68.3 3 0.00022 19.1 4.0 29 53-83 5-33 (212) 57 d1uaaa1 c.37.1.19 (A:2-307) DE 68.0 1.5 0.00011 21.4 2.4 36 43-81 14-53 (306) 58 d1rkxa_ c.2.1.2 (A:) CDP-gluco 67.7 3.3 0.00024 18.9 4.1 31 52-84 12-42 (356) 59 d1y1la_ c.44.1.1 (A:) Arsenate 67.3 3.6 0.00026 18.6 4.3 32 45-84 3-34 (124) 60 d1ye8a1 c.37.1.11 (A:1-178) Hy 67.3 1.8 0.00013 20.7 2.7 19 55-73 9-27 (178) 61 d1yksa1 c.37.1.14 (A:185-324) 67.0 2.1 0.00015 20.3 3.0 27 55-81 16-43 (140) 62 d1tvca2 c.25.1.2 (A:111-251) M 66.6 3.8 0.00027 18.5 5.3 30 40-73 5-34 (141) 63 d1m8pa3 c.37.1.15 (A:391-573) 65.8 1.8 0.00013 20.7 2.5 28 54-81 14-41 (183) 64 d1gvha3 c.25.1.5 (A:254-396) F 65.4 3 0.00022 19.2 3.5 27 43-73 6-32 (143) 65 d1w5sa2 c.37.1.20 (A:7-293) CD 65.1 1.4 9.9E-05 21.6 1.7 20 55-74 55-74 (287) 66 d1xgka_ c.2.1.2 (A:) Negative 64.9 4 0.00029 18.3 4.1 31 52-84 7-37 (350) 67 d1wp9a1 c.37.1.19 (A:1-200) pu 64.9 3.6 0.00026 18.6 3.9 28 54-81 31-59 (200) 68 d1rpna_ c.2.1.2 (A:) GDP-manno 64.8 4.1 0.0003 18.2 4.2 31 52-84 4-34 (321) 69 d1in4a2 c.37.1.20 (A:17-254) H 64.1 2.4 0.00018 19.9 2.8 31 45-81 37-67 (238) 70 d1krha2 c.25.1.2 (A:206-338) B 63.5 2.7 0.00019 19.5 3.0 28 42-73 4-31 (133) 71 d2a5yb3 c.37.1.20 (B:109-385) 63.0 2.2 0.00016 20.1 2.5 22 46-70 47-68 (277) 72 d2nqra3 c.57.1.2 (A:178-326) M 62.9 4.4 0.00032 18.0 4.4 69 175-245 56-135 (149) 73 d1kjna_ c.115.1.1 (A:) Hypothe 62.5 2.9 0.00021 19.3 3.0 23 59-81 16-38 (152) 74 d1veca_ c.37.1.19 (A:) DEAD bo 62.4 4.5 0.00033 17.9 4.3 95 55-160 49-154 (206) 75 d1u94a1 c.37.1.11 (A:6-268) Re 62.4 3 0.00022 19.2 3.1 43 39-81 27-89 (263) 76 d1viaa_ c.37.1.2 (A:) Shikimat 61.9 2.5 0.00019 19.7 2.6 23 45-70 2-24 (161) 77 d1qyda_ c.2.1.2 (A:) Pinoresin 61.8 4.3 0.00031 18.1 3.8 32 52-85 7-38 (312) 78 d1rzua_ c.87.1.8 (A:) Glycogen 61.7 1.5 0.00011 21.3 1.5 32 53-86 15-46 (477) 79 d1uz5a3 c.57.1.2 (A:181-328) M 61.6 4.6 0.00034 17.9 4.4 69 175-245 56-135 (148) 80 d1m7ga_ c.37.1.4 (A:) Adenosin 61.4 1.9 0.00014 20.6 1.9 29 55-83 33-61 (208) 81 d1cqxa3 c.25.1.5 (A:262-403) F 61.4 2.7 0.00019 19.5 2.7 28 43-74 5-32 (142) 82 d1w36d1 c.37.1.19 (D:2-360) Ex 61.1 3 0.00022 19.2 2.9 18 55-72 172-189 (359) 83 d1lw7a2 c.37.1.1 (A:220-411) T 60.9 1.6 0.00011 21.2 1.4 26 42-70 6-31 (192) 84 d1a1va1 c.37.1.14 (A:190-325) 60.4 2.9 0.00021 19.2 2.8 24 55-81 17-40 (136) 85 d1eg7a_ c.37.1.10 (A:) Formylt 60.2 3.4 0.00025 18.8 3.1 39 44-82 51-91 (549) 86 d1uj2a_ c.37.1.6 (A:) Uridine- 60.0 2.9 0.00021 19.3 2.6 28 55-82 11-43 (213) 87 d1n7ha_ c.2.1.2 (A:) GDP-manno 60.0 4.9 0.00036 17.7 4.1 30 52-83 5-34 (339) 88 d1pjra1 c.37.1.19 (A:1-318) DE 59.6 5 0.00036 17.6 4.4 84 250-334 218-308 (318) 89 d1xp8a1 c.37.1.11 (A:15-282) R 58.7 3.4 0.00025 18.7 2.9 44 38-81 29-92 (268) 90 d1ckea_ c.37.1.1 (A:) CMP kina 58.1 3.4 0.00024 18.8 2.7 32 44-83 3-35 (225) 91 d1ddga2 c.25.1.4 (A:447-599) S 58.0 5.3 0.00038 17.4 4.4 36 41-80 4-39 (153) 92 d1sxja2 c.37.1.20 (A:295-547) 57.1 1.8 0.00013 20.7 1.2 32 45-82 54-85 (253) 93 d1t2aa_ c.2.1.2 (A:) GDP-manno 56.9 5.5 0.0004 17.3 4.1 29 52-82 5-33 (347) 94 d1zaka1 c.37.1.1 (A:3-127,A:15 56.6 3.9 0.00028 18.4 2.9 25 43-70 3-27 (189) 95 d1o51a_ d.58.5.4 (A:) Hypothet 56.5 5.6 0.00041 17.3 4.0 74 59-142 18-97 (102) 96 d2bmfa2 c.37.1.14 (A:178-482) 56.3 4.7 0.00034 17.8 3.2 53 222-283 178-232 (305) 97 d1htwa_ c.37.1.18 (A:) Hypothe 56.3 1.9 0.00014 20.6 1.2 26 45-73 35-60 (158) 98 d1tmka_ c.37.1.1 (A:) Thymidyl 55.3 2.1 0.00016 20.2 1.4 21 55-75 12-32 (214) 99 d1ja1a3 c.25.1.4 (A:519-678) N 55.1 5.3 0.00039 17.4 3.3 27 40-70 4-30 (160) 100 d1wu2a3 c.57.1.2 (A:181-324) M 54.9 5 0.00036 17.6 3.2 21 222-244 110-130 (144) 101 d1hdoa_ c.2.1.2 (A:) Biliverdi 54.8 5.9 0.00043 17.1 4.1 32 52-85 7-38 (205) 102 d2ocpa1 c.37.1.1 (A:37-277) De 54.6 1.8 0.00013 20.7 0.9 27 48-77 7-33 (241) 103 d1n4wa1 c.3.1.2 (A:9-318,A:451 54.6 2 0.00015 20.4 1.1 32 44-83 3-34 (367) 104 d2bisa1 c.87.1.8 (A:1-437) Gly 53.8 5.1 0.00037 17.6 3.1 32 54-87 15-46 (437) 105 d1p9oa_ c.72.3.1 (A:) Phosphop 53.6 2.6 0.00019 19.6 1.6 38 41-83 31-69 (290) 106 d2bmwa2 c.25.1.1 (A:142-303) F 52.9 3.3 0.00024 18.9 2.0 28 41-72 4-31 (162) 107 d1lv7a_ c.37.1.20 (A:) AAA dom 52.7 4.3 0.00031 18.1 2.5 34 42-81 44-77 (256) 108 d1thta_ c.69.1.13 (A:) Myristo 52.6 6.4 0.00047 16.8 4.3 89 55-146 40-137 (302) 109 d1vl0a_ c.2.1.2 (A:) DTDP-4-de 52.6 6.4 0.00047 16.8 3.5 31 52-84 5-35 (281) 110 d1x6va3 c.37.1.4 (A:34-228) Ad 52.5 2.2 0.00016 20.1 1.1 30 55-84 28-57 (195) 111 d1sxje2 c.37.1.20 (E:4-255) Re 52.3 6.5 0.00047 16.8 4.1 27 45-74 35-61 (252) 112 d2bkaa1 c.2.1.2 (A:5-236) TAT- 52.2 6.2 0.00045 16.9 3.3 29 52-82 18-48 (232) 113 d1sxjc2 c.37.1.20 (C:12-238) R 51.7 2.3 0.00017 20.0 1.0 28 46-76 38-65 (227) 114 d1ukza_ c.37.1.1 (A:) Uridylat 51.0 4.4 0.00032 18.0 2.4 27 42-70 6-32 (196) 115 d1e9ra_ c.37.1.11 (A:) Bacteri 50.8 5.5 0.0004 17.3 2.8 33 46-81 53-85 (433) 116 d1iqpa2 c.37.1.20 (A:2-232) Re 50.7 2.6 0.00019 19.7 1.1 26 46-74 48-73 (231) 117 d1mo6a1 c.37.1.11 (A:1-269) Re 50.4 5.7 0.00041 17.2 2.9 26 56-81 70-95 (269) 118 d1qfja2 c.25.1.1 (A:98-232) NA 50.1 5.4 0.00039 17.4 2.7 28 42-73 4-31 (135) 119 d2c5aa1 c.2.1.2 (A:13-375) GDP 50.0 7 0.00051 16.6 4.1 30 52-83 19-48 (363) 120 d1ixsb2 c.37.1.20 (B:4-242) Ho 49.9 7 0.00051 16.6 4.5 34 42-81 34-67 (239) 121 d1svsa1 c.37.1.8 (A:32-60,A:18 49.9 3.6 0.00026 18.7 1.8 21 44-67 3-23 (195) 122 d1w44a_ c.37.1.11 (A:) NTPase 49.7 3.2 0.00024 18.9 1.5 25 48-72 122-149 (321) 123 d2d00a1 c.149.1.1 (A:6-109) V- 49.6 6.9 0.0005 16.6 3.2 55 229-292 2-58 (104) 124 d1ixza_ c.37.1.20 (A:) AAA dom 49.6 5.1 0.00037 17.5 2.5 33 43-81 42-74 (247) 125 d2ftsa3 c.57.1.2 (A:499-653) G 49.6 7.1 0.00052 16.5 4.4 19 226-244 122-140 (155) 126 d2pd4a1 c.2.1.2 (A:2-275) Enoy 49.5 7.1 0.00052 16.5 3.8 32 52-83 9-40 (274) 127 d2b69a1 c.2.1.2 (A:4-315) UDP- 49.0 7.3 0.00053 16.5 4.6 33 52-86 5-37 (312) 128 d1gvnb_ c.37.1.21 (B:) Plasmid 48.8 3.6 0.00026 18.6 1.7 30 46-81 35-64 (273) 129 d1d1qa_ c.44.1.1 (A:) Tyrosine 48.5 4.8 0.00035 17.8 2.2 40 41-85 5-48 (159) 130 d1vhta_ c.37.1.1 (A:) Dephosph 48.5 5.2 0.00038 17.5 2.4 25 46-77 5-30 (208) 131 d1fnda2 c.25.1.1 (A:155-314) F 48.2 5 0.00037 17.6 2.3 28 41-72 6-33 (160) 132 d1tf7a1 c.37.1.11 (A:14-255) C 48.1 6.3 0.00046 16.9 2.8 29 55-83 35-64 (242) 133 d1di6a_ c.57.1.1 (A:) MogA {Es 48.0 4.1 0.0003 18.2 1.8 21 224-244 125-145 (190) 134 d1t6na_ c.37.1.19 (A:) Spliceo 47.7 7.6 0.00055 16.3 3.7 96 55-161 47-154 (207) 135 d1u7pa_ c.108.1.17 (A:) Magnes 47.3 7.7 0.00056 16.3 3.5 40 230-277 97-136 (164) 136 d1fdra2 c.25.1.1 (A:101-248) F 47.1 3.1 0.00023 19.1 1.1 21 53-74 12-32 (148) 137 d1rkba_ c.37.1.1 (A:) Adenylat 47.1 3.8 0.00028 18.5 1.5 16 55-70 13-28 (173) 138 d1sxjb2 c.37.1.20 (B:7-230) Re 46.7 2.9 0.00021 19.2 0.9 21 56-76 46-66 (224) 139 d1pn3a_ c.87.1.5 (A:) TDP-epi- 46.5 6.8 0.0005 16.6 2.8 32 53-84 6-38 (391) 140 d1umka2 c.25.1.1 (A:154-300) c 46.3 4.4 0.00032 18.0 1.8 33 42-74 11-45 (147) 141 d1sxjd2 c.37.1.20 (D:26-262) R 46.0 4 0.00029 18.3 1.5 25 46-73 36-60 (237) 142 d1r7ra3 c.37.1.20 (A:471-735) 45.7 5.5 0.0004 17.3 2.2 33 43-81 41-73 (265) 143 d1uuya_ c.57.1.1 (A:) Plant CN 45.5 4.1 0.0003 18.2 1.5 19 225-243 130-148 (161) 144 d2r8ba1 c.69.1.14 (A:44-246) U 45.2 8.2 0.0006 16.1 3.6 53 222-275 143-202 (203) 145 d1d2na_ c.37.1.20 (A:) Hexamer 44.9 4.3 0.00031 18.1 1.5 24 45-71 42-65 (246) 146 d1jl3a_ c.44.1.1 (A:) Arsenate 44.5 5.9 0.00043 17.1 2.2 34 44-84 4-37 (137) 147 d1uf9a_ c.37.1.1 (A:) Dephosph 44.5 4.3 0.00031 18.1 1.5 19 55-77 12-30 (191) 148 d1x94a_ c.80.1.3 (A:) Phosphoh 44.2 8.5 0.00062 16.0 4.3 25 267-291 129-154 (191) 149 d1oc2a_ c.2.1.2 (A:) dTDP-gluc 44.1 8.5 0.00062 15.9 3.7 30 52-83 6-35 (346) 150 d2iw1a1 c.87.1.8 (A:2-371) Lip 44.1 7.2 0.00052 16.5 2.6 33 54-88 12-44 (370) 151 d1ofha_ c.37.1.20 (A:) HslU {H 43.9 4.5 0.00033 17.9 1.5 26 43-71 49-74 (309) 152 d1kaga_ c.37.1.2 (A:) Shikimat 43.9 3.9 0.00028 18.4 1.2 23 45-70 4-26 (169) 153 d2fz4a1 c.37.1.19 (A:24-229) D 43.9 6.6 0.00048 16.7 2.4 13 56-68 95-107 (206) 154 d1p3da1 c.5.1.1 (A:11-106) UDP 43.7 4.4 0.00032 18.0 1.4 23 53-79 15-37 (96) 155 d1db3a_ c.2.1.2 (A:) GDP-manno 43.7 8.7 0.00063 15.9 3.8 30 52-83 5-34 (357) 156 d2j0sa1 c.37.1.19 (A:22-243) P 43.2 8.8 0.00064 15.9 4.0 96 55-161 63-168 (222) 157 d1ek6a_ c.2.1.2 (A:) Uridine d 42.9 8.9 0.00065 15.8 4.7 34 52-87 6-42 (346) 158 d1p6xa_ c.37.1.1 (A:) Thymidin 42.5 6.7 0.00049 16.7 2.2 31 46-80 9-39 (333) 159 d1sb8a_ c.2.1.2 (A:) UDP-N-ace 42.3 9.1 0.00066 15.8 4.1 29 52-82 20-48 (341) 160 d1udca_ c.2.1.2 (A:) Uridine d 41.9 9.2 0.00067 15.7 4.1 29 52-82 4-32 (338) 161 d1svma_ c.37.1.20 (A:) Papillo 41.9 5.1 0.00037 17.5 1.5 17 55-71 163-179 (362) 162 d2g0ta1 c.37.1.10 (A:1-338) Hy 41.8 9.2 0.00067 15.7 3.6 122 44-177 13-154 (338) 163 d1e6ca_ c.37.1.2 (A:) Shikimat 41.2 9.4 0.00068 15.7 2.8 24 44-70 3-26 (170) 164 d1njfa_ c.37.1.20 (A:) delta p 40.3 9.7 0.00071 15.6 3.6 30 41-73 32-61 (239) 165 d1ur4a_ c.1.8.3 (A:) Beta-1,4- 40.1 9.8 0.00071 15.5 4.5 64 224-288 189-258 (387) 166 d1nnla_ c.108.1.4 (A:) Phospho 39.6 8.6 0.00063 15.9 2.4 26 60-85 84-109 (217) 167 d2fi1a1 c.108.1.3 (A:4-190) Pu 39.4 8.6 0.00063 15.9 2.4 23 233-257 136-158 (187) 168 d1p9ra_ c.37.1.11 (A:) Extrace 39.4 10 0.00073 15.5 7.2 20 224-243 229-248 (401) 169 d2fuka1 c.69.1.36 (A:3-220) XC 39.2 10 0.00074 15.4 3.5 44 45-88 38-82 (218) 170 d1zh2a1 c.23.1.1 (A:2-120) Tra 39.0 10 0.00074 15.4 3.8 20 224-243 73-92 (119) 171 d1zcba2 c.37.1.8 (A:47-75,A:20 38.8 6.9 0.0005 16.6 1.8 20 44-66 3-22 (200) 172 d2a9pa1 c.23.1.1 (A:2-118) DNA 38.8 10 0.00074 15.4 3.8 26 116-141 26-51 (117) 173 d1iira_ c.87.1.5 (A:) UDP-gluc 38.7 10 0.00075 15.4 2.8 33 52-84 5-38 (401) 174 d2btma_ c.1.1.1 (A:) Triosepho 38.5 7.6 0.00056 16.3 2.0 14 228-241 209-222 (251) 175 d1qhxa_ c.37.1.3 (A:) Chloramp 38.3 5.5 0.0004 17.3 1.2 17 55-71 12-28 (178) 176 d1wrba1 c.37.1.19 (A:164-401) 38.0 11 0.00076 15.3 4.8 59 55-116 67-126 (238) 177 d1ly1a_ c.37.1.1 (A:) Polynucl 37.9 7.4 0.00054 16.4 1.9 23 55-81 11-33 (152) 178 d2cnda2 c.25.1.1 (A:125-270) N 37.5 6.8 0.0005 16.6 1.6 21 53-73 18-38 (146) 179 d2bdta1 c.37.1.25 (A:1-176) Hy 37.4 5.4 0.00039 17.4 1.1 17 55-71 11-27 (176) 180 d2vp4a1 c.37.1.1 (A:12-208) De 37.3 2.5 0.00018 19.8 -0.7 30 44-80 10-39 (197) 181 d1knqa_ c.37.1.17 (A:) Glucona 36.7 6.8 0.0005 16.6 1.5 17 54-70 14-30 (171) 182 d1z45a2 c.2.1.2 (A:11-357) Uri 36.7 11 0.0008 15.2 6.7 30 52-83 5-34 (347) 183 d2p6ra3 c.37.1.19 (A:1-202) He 36.6 6.1 0.00045 17.0 1.3 22 222-243 172-194 (202) 184 d1y63a_ c.37.1.1 (A:) Probable 36.5 5.6 0.00041 17.2 1.1 25 44-71 6-30 (174) 185 d1e32a2 c.37.1.20 (A:201-458) 36.1 6.1 0.00045 17.0 1.2 33 43-81 38-70 (258) 186 d1e2ka_ c.37.1.1 (A:) Thymidin 36.1 5.7 0.00042 17.2 1.1 23 48-73 9-31 (329) 187 d3raba_ c.37.1.8 (A:) Rab3a {R 36.1 10 0.00076 15.3 2.4 22 44-68 6-27 (169) 188 d1xhfa1 c.23.1.1 (A:2-122) Aer 35.8 11 0.00083 15.1 4.3 17 224-240 75-91 (121) 189 d2iyva1 c.37.1.2 (A:2-166) Shi 35.5 7.4 0.00054 16.4 1.5 22 46-70 4-25 (165) 190 d1qkka_ c.23.1.1 (A:) Transcri 35.3 12 0.00084 15.0 4.3 25 117-141 27-51 (140) 191 d1tzfa_ c.68.1.13 (A:) Glucose 35.2 12 0.00084 15.0 3.0 39 40-86 21-59 (259) 192 d1jjva_ c.37.1.1 (A:) Dephosph 35.2 7.3 0.00053 16.4 1.5 23 48-77 7-29 (205) 193 d1qsga_ c.2.1.2 (A:) Enoyl-ACP 34.9 12 0.00085 15.0 3.7 31 52-82 9-39 (258) 194 d3coxa1 c.3.1.2 (A:5-318,A:451 34.6 7.6 0.00055 16.3 1.5 32 44-83 8-39 (370) 195 d1tk9a_ c.80.1.3 (A:) Phosphoh 34.3 12 0.00087 14.9 4.8 12 126-137 129-140 (188) 196 d1x1ra1 c.37.1.8 (A:10-178) Ra 33.5 12 0.00088 14.9 2.4 20 45-67 6-25 (169) 197 d1z3ix2 c.37.1.19 (X:92-389) R 33.1 12 0.00091 14.8 3.1 19 56-74 89-107 (298) 198 d1foba_ c.1.8.3 (A:) Beta-1,4- 33.0 12 0.00091 14.8 4.4 65 223-287 174-250 (334) 199 d2bcjq2 c.37.1.8 (Q:38-66,Q:18 32.9 9.3 0.00068 15.7 1.7 22 44-68 3-24 (200) 200 d1e5qa1 c.2.1.3 (A:2-124,A:392 32.8 13 0.00092 14.8 3.6 32 51-84 4-35 (182) 201 d2atva1 c.37.1.8 (A:5-172) Ras 32.8 10 0.00076 15.3 2.0 22 43-67 2-23 (168) 202 d1f20a2 c.25.1.4 (A:1233-1397) 32.8 13 0.00092 14.7 3.2 48 223-278 111-158 (165) 203 d1r6bx2 c.37.1.20 (X:169-436) 32.7 13 0.00092 14.7 3.2 27 44-73 40-66 (268) 204 d1zp6a1 c.37.1.25 (A:6-181) Hy 32.6 6.3 0.00046 16.9 0.8 24 55-81 13-36 (176) 205 d1jbka_ c.37.1.20 (A:) ClpB, A 32.0 9.6 0.0007 15.6 1.7 27 44-73 44-70 (195) 206 d1p5zb_ c.37.1.1 (B:) Deoxycyt 31.9 1.8 0.00013 20.7 -2.0 30 48-80 7-36 (241) 207 d2erxa1 c.37.1.8 (A:6-176) di- 31.6 11 0.00078 15.2 1.9 20 45-67 4-23 (171) 208 d1vzya2 g.81.1.1 (A:234-290) H 31.6 13 0.00096 14.6 2.7 39 234-272 18-56 (57) 209 d1vjpa2 d.81.1.3 (A:210-316) H 31.2 12 0.00086 15.0 2.0 33 56-88 1-34 (107) 210 d1trea_ c.1.1.1 (A:) Triosepho 31.1 12 0.00086 14.9 2.0 11 47-57 5-15 (255) 211 d1rifa_ c.37.1.23 (A:) DNA hel 31.1 13 0.00098 14.6 2.6 25 57-81 57-83 (282) 212 d1zina1 c.37.1.1 (A:1-125,A:16 30.9 9.7 0.00071 15.5 1.5 16 55-70 9-24 (182) 213 d2i1qa2 c.37.1.11 (A:65-322) D 30.7 5.5 0.0004 17.3 0.2 36 47-82 31-70 (258) 214 d1orra_ c.2.1.2 (A:) CDP-tyvel 30.6 14 0.00099 14.5 4.1 29 52-82 4-32 (338) 215 d1mh1a_ c.37.1.8 (A:) Rac {Hum 30.6 11 0.0008 15.2 1.8 21 44-67 6-26 (183) 216 d1lvga_ c.37.1.1 (A:) Guanylat 30.6 14 0.00099 14.5 2.6 25 45-72 2-26 (190) 217 d1j6ua1 c.5.1.1 (A:0-88) UDP-N 30.4 5.6 0.00041 17.2 0.3 22 53-78 8-29 (89) 218 d1gkma_ a.127.1.2 (A:) Histidi 30.4 14 0.001 14.5 2.6 40 46-85 101-140 (509) 219 d1r6da_ c.2.1.2 (A:) dTDP-gluc 30.1 14 0.001 14.4 4.7 29 52-82 4-32 (322) 220 d3ceda1 d.58.18.13 (A:247-341) 29.9 14 0.001 14.4 4.3 23 55-80 26-48 (95) 221 d1fjha_ c.2.1.2 (A:) 3-alpha-h 29.8 14 0.001 14.4 4.1 29 52-82 5-33 (257) 222 d1pfka_ c.89.1.1 (A:) ATP-depe 29.8 14 0.001 14.4 3.5 103 49-159 5-124 (320) 223 d1s3ga1 c.37.1.1 (A:1-125,A:16 29.8 10 0.00076 15.3 1.5 17 54-70 8-24 (182) 224 d2cdna1 c.37.1.1 (A:1-181) Ade 29.7 10 0.00076 15.3 1.5 16 55-70 9-24 (181) 225 d1krwa_ c.23.1.1 (A:) NTRC rec 29.6 14 0.001 14.4 4.7 25 117-141 30-54 (123) 226 d1rrva_ c.87.1.5 (A:) TDP-vanc 29.5 14 0.001 14.4 2.6 28 54-82 7-36 (401) 227 d2pl1a1 c.23.1.1 (A:1-119) Pho 29.3 12 0.0009 14.8 1.9 25 117-141 27-51 (119) 228 d1gkya_ c.37.1.1 (A:) Guanylat 29.3 14 0.001 14.3 2.5 36 45-83 3-39 (186) 229 d1c4oa2 c.37.1.19 (A:410-583) 29.0 14 0.0011 14.3 6.1 19 126-144 73-91 (174) 230 d2a35a1 c.2.1.2 (A:4-215) Hypo 28.9 15 0.0011 14.3 3.1 29 52-82 6-34 (212) 231 d2h1ia1 c.69.1.14 (A:1-202) Ca 28.9 15 0.0011 14.3 5.9 51 222-273 142-199 (202) 232 d1e6ua_ c.2.1.2 (A:) GDP-4-ket 28.8 15 0.0011 14.3 3.4 29 52-82 6-34 (315) 233 d1mvoa_ c.23.1.1 (A:) PhoP rec 28.4 12 0.00087 14.9 1.6 26 116-141 28-53 (121) 234 d1jb9a2 c.25.1.1 (A:163-316) F 28.2 10 0.00076 15.3 1.3 26 43-72 3-28 (154) 235 d1w6ua_ c.2.1.2 (A:) 2,4-dieno 28.2 15 0.0011 14.2 4.1 28 53-82 30-57 (294) 236 d1a8pa2 c.25.1.1 (A:101-258) F 28.1 7.5 0.00055 16.4 0.6 32 45-80 9-40 (158) 237 d1ak2a1 c.37.1.1 (A:14-146,A:1 27.8 12 0.00086 14.9 1.5 24 44-70 4-27 (190) 238 d1jf8a_ c.44.1.1 (A:) Arsenate 27.8 15 0.0011 14.2 3.0 34 44-84 5-38 (130) 239 d1qf9a_ c.37.1.1 (A:) UMP/CMP 27.8 12 0.00087 14.9 1.5 17 54-70 14-30 (194) 240 d1xjha_ g.81.1.1 (A:) HSP33, C 27.7 11 0.00082 15.1 1.4 42 230-272 20-61 (62) 241 d1a2oa1 c.23.1.1 (A:1-140) Met 27.7 10 0.00074 15.4 1.2 25 117-141 32-56 (140) 242 d1ltqa1 c.108.1.9 (A:153-301) 27.7 15 0.0011 14.2 3.2 22 60-81 38-59 (149) 243 d1x92a_ c.80.1.3 (A:) Phosphoh 27.6 15 0.0011 14.2 3.8 19 122-140 125-143 (194) 244 d1dbwa_ c.23.1.1 (A:) Transcri 27.6 15 0.0011 14.1 2.1 46 222-274 75-120 (123) 245 d1x74a1 c.123.1.1 (A:2-360) 2- 27.5 15 0.0011 14.1 2.5 32 43-82 6-37 (359) 246 d1e4va1 c.37.1.1 (A:1-121,A:15 27.4 12 0.00089 14.8 1.5 16 55-70 9-24 (179) 247 d1g8pa_ c.37.1.20 (A:) ATPase 27.1 12 0.00085 15.0 1.4 23 46-71 31-53 (333) 248 d1teva_ c.37.1.1 (A:) UMP/CMP 26.9 13 0.00092 14.7 1.5 16 55-70 10-25 (194) 249 d2fnaa2 c.37.1.20 (A:1-283) Ar 26.7 13 0.00098 14.5 1.7 18 54-71 37-54 (283) 250 d1u8za_ c.37.1.8 (A:) Ras-rela 26.6 16 0.0012 14.0 2.4 20 45-67 6-25 (168) 251 d1kewa_ c.2.1.2 (A:) dTDP-gluc 26.4 16 0.0012 14.0 4.0 29 52-82 4-32 (361) 252 d1znwa1 c.37.1.1 (A:20-201) Gu 26.0 9.9 0.00072 15.5 0.9 28 55-82 11-38 (182) 253 d1a04a2 c.23.1.1 (A:5-142) Nit 26.0 9.7 0.00071 15.5 0.8 22 120-141 34-55 (138) 254 d1kgsa2 c.23.1.1 (A:2-123) Pho 25.8 15 0.0011 14.1 1.8 25 117-141 28-52 (122) 255 d2f5va1 c.3.1.2 (A:43-354,A:55 25.7 13 0.00095 14.7 1.4 32 46-85 7-38 (379) 256 d1q3ta_ c.37.1.1 (A:) CMP kina 25.7 14 0.001 14.5 1.5 24 55-83 12-35 (223) 257 d1p8aa_ c.44.1.1 (A:) Tyrosine 25.6 5.1 0.00037 17.5 -0.6 36 41-83 4-39 (146) 258 d2g9na1 c.37.1.19 (A:21-238) I 25.6 17 0.0012 13.9 4.0 50 54-114 57-106 (218) 259 d1u7za_ c.72.3.1 (A:) Coenzyme 25.2 17 0.0012 13.9 4.1 32 45-81 22-53 (223) 260 d1akya1 c.37.1.1 (A:3-130,A:16 25.0 14 0.001 14.3 1.5 23 45-70 4-26 (180) 261 d1u1ia2 d.81.1.3 (A:228-332) M 24.8 17 0.0012 13.8 2.0 24 57-80 1-24 (105) 262 d2c0ha1 c.1.8.3 (A:18-367) end 24.5 17 0.0013 13.8 4.4 18 63-80 44-61 (350) 263 d1vkoa2 d.81.1.3 (A:315-428) M 24.5 17 0.0013 13.8 2.0 24 57-80 1-24 (114) 264 g1w2w.1 c.124.1.5 (A:,B:) Puta 24.2 13 0.00097 14.6 1.3 64 114-177 215-288 (402) 265 d1w25a1 c.23.1.1 (A:2-140) Res 24.1 15 0.0011 14.1 1.6 26 116-141 27-52 (139) 266 d2ak3a1 c.37.1.1 (A:0-124,A:16 24.0 12 0.00088 14.9 1.0 22 46-70 9-30 (189) 267 d1dg9a_ c.44.1.1 (A:) Tyrosine 24.0 18 0.0013 13.7 3.1 37 43-84 7-46 (157) 268 d1ulua_ c.2.1.2 (A:) Enoyl-ACP 24.0 18 0.0013 13.7 3.8 31 52-82 12-42 (256) 269 d1kv5a_ c.1.1.1 (A:) Triosepho 23.9 9.3 0.00067 15.7 0.4 11 47-57 6-16 (249) 270 d1g16a_ c.37.1.8 (A:) Rab-rela 23.7 16 0.0012 14.0 1.6 20 45-67 4-23 (166) 271 d2ngra_ c.37.1.8 (A:) CDC42 {H 23.5 17 0.0012 13.9 1.6 22 44-68 4-25 (191) 272 d1yp2a2 c.68.1.6 (A:10-316) Gl 23.5 18 0.0013 13.6 2.3 39 42-87 32-70 (307) 273 d1ny5a1 c.23.1.1 (A:1-137) Tra 23.4 16 0.0011 14.1 1.5 25 117-141 27-51 (137) 274 d1x3sa1 c.37.1.8 (A:2-178) Rab 23.2 17 0.0013 13.8 1.7 21 44-67 8-28 (177) 275 d1um8a_ c.37.1.20 (A:) ClpX {H 23.0 14 0.0011 14.3 1.2 22 49-70 68-92 (364) 276 d1ktba2 c.1.8.1 (A:1-293) Meli 22.9 18 0.0013 13.6 2.5 13 134-146 54-66 (293) 277 d1eq2a_ c.2.1.2 (A:) ADP-L-gly 22.9 19 0.0013 13.6 4.4 27 52-80 3-30 (307) 278 d1g41a_ c.37.1.20 (A:) HslU {H 22.7 19 0.0014 13.5 4.5 32 43-81 49-80 (443) 279 d1zy9a2 c.1.8.13 (A:178-525) A 22.3 19 0.0014 13.5 2.4 42 41-83 34-83 (348) 280 d1s2ma2 c.37.1.19 (A:252-422) 22.2 19 0.0014 13.5 6.0 21 60-80 42-62 (171) 281 d2f7sa1 c.37.1.8 (A:5-190) Rab 22.1 15 0.0011 14.2 1.2 20 44-66 6-25 (186) 282 d2pv7a2 c.2.1.6 (A:92-243) Pre 22.0 19 0.0014 13.4 3.1 27 54-82 15-41 (152) 283 d1umdb2 c.48.1.2 (B:188-324) B 22.0 19 0.0014 13.4 3.2 32 43-81 17-48 (137) 284 d1kdga1 c.3.1.2 (A:215-512,A:6 21.9 17 0.0013 13.8 1.5 22 63-84 14-35 (360) 285 d2fr1a1 c.2.1.2 (A:1657-1915) 21.8 19 0.0014 13.4 3.8 29 52-82 13-42 (259) 286 d1m7ba_ c.37.1.8 (A:) RhoE (RN 21.7 18 0.0013 13.7 1.5 23 43-68 2-24 (179) 287 d1m2ka_ c.31.1.5 (A:) AF1676, 21.2 20 0.0015 13.3 2.0 20 61-81 78-97 (249) 288 d1ky3a_ c.37.1.8 (A:) Rab-rela 21.2 20 0.0015 13.3 2.4 20 45-67 4-23 (175) 289 d1psza_ c.92.2.2 (A:) Pneumoco 21.2 20 0.0015 13.3 2.1 50 234-283 182-231 (286) 290 d1p1ja2 d.81.1.3 (A:323-437) M 21.1 20 0.0015 13.3 2.0 24 57-80 1-24 (115) 291 d1mb3a_ c.23.1.1 (A:) Cell div 21.0 19 0.0014 13.4 1.6 25 117-141 28-52 (123) 292 d1uaya_ c.2.1.2 (A:) Type II 3 20.9 20 0.0015 13.3 3.8 29 52-82 5-33 (241) 293 d1g7sa4 c.37.1.8 (A:1-227) Ini 20.9 20 0.0015 13.3 2.7 22 44-69 5-28 (227) 294 d1m3sa_ c.80.1.3 (A:) Hypothet 20.9 20 0.0015 13.3 4.7 20 61-80 50-69 (186) 295 d1jeoa_ c.80.1.3 (A:) Probable 20.9 20 0.0015 13.3 4.1 93 61-175 50-142 (177) 296 d1nkta1 a.162.1.1 (A:226-349) 20.7 20 0.0015 13.3 2.9 43 126-183 71-113 (124) 297 d1i24a_ c.2.1.2 (A:) Sulfolipi 20.5 21 0.0015 13.2 3.9 31 52-84 5-38 (393) 298 d1xvla1 c.92.2.2 (A:49-327) Mn 20.5 21 0.0015 13.2 3.0 51 234-284 172-222 (279) 299 d1ebda2 c.3.1.5 (A:155-271) Di 20.3 21 0.0015 13.2 4.0 36 41-84 20-55 (117) 300 d1azta2 c.37.1.8 (A:35-65,A:20 20.3 15 0.0011 14.1 0.9 22 42-66 5-26 (221) 301 d1vima_ c.80.1.3 (A:) Hypothet 20.3 21 0.0015 13.2 4.0 32 45-81 42-73 (192) 302 d1xpma2 c.95.1.2 (A:168-388) 3 20.3 21 0.0015 13.2 2.7 20 219-238 127-147 (221) 303 d1y1pa1 c.2.1.2 (A:2-343) Alde 20.2 21 0.0015 13.2 3.5 29 53-83 16-44 (342) 304 d1ys7a2 c.23.1.1 (A:7-127) Tra 20.2 21 0.0015 13.2 1.8 25 117-141 28-52 (121) 305 d1ydya1 c.1.18.3 (A:29-356) Gl 20.2 21 0.0015 13.2 1.7 47 107-158 2-49 (328) 306 d1vd6a1 c.1.18.3 (A:8-224) Put 20.2 21 0.0015 13.2 1.6 47 108-159 1-48 (217) 307 d2oi6a2 c.68.1.5 (A:4-251) N-a 20.0 21 0.0015 13.2 3.0 38 42-87 20-57 (248) No 1 >d1nija1 c.37.1.10 (A:2-223) Hypothetical protein YjiA, N-terminal domain {Escherichia coli [TaxId: 562]} Probab=96.71 E-value=0.00019 Score=48.95 Aligned_cols=137 Identities=20% Similarity=0.238 Sum_probs=71.8 Q ss_pred CCCEEEECCEEECCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCEEEECCCCCHHHHCCHHHHHHHCCCCCCCCC Q ss_conf 89889982300078887489999999985247315987604578777755871456788770421233220576346520 Q gi|254780401|r 43 PIPVICVGGFVMGGTGKTPTALAIAKAVIDKNLKPGFLSRGYGRKSRISFRVDLEKHSAYDVGDEPLLLARRAVTIVTSD 122 (338) Q Consensus 43 ~~pVI~VGNitvGGtGKTP~v~~l~~~l~~~g~~~~ilsRGYg~~~~~~~~v~~~~~~~~~vGDEp~lla~~~pv~V~~~ 122 (338) |+||..|+-.- |+|||.+...+.+. ..|.+++||.--+|... ++.... ...+++...+...|--+.... T Consensus 2 ~iPv~iitGFL--GaGKTTll~~lL~~--~~~~riaVI~Ne~g~~~-----iD~~~~--~~~~~~~~el~~gcicc~~~~ 70 (222) T d1nija1 2 PIAVTLLTGFL--GAGKTTLLRHILNE--QHGYKIAVIENEFGEVS-----VDDQLI--GDRATQIKTLTNGCICCSRSN 70 (222) T ss_dssp CEEEEEEEESS--SSSCHHHHHHHHHS--CCCCCEEEECSSCCSCC-----EEEEEE--CTTSCEEEEETTSCEEECTTS T ss_pred CCCEEEEEECC--CCCHHHHHHHHHHC--CCCCCEEEEEECCCCHH-----HHHHHH--CCCCCCEEEECCCCCEECCCH T ss_conf 97889986488--89999999999856--78983799973664112-----233430--256652488438840000003 Q ss_pred H-HHHHHHH-C-----CCCCCEEEE----------------CCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCHHHHHCC Q ss_conf 1-2256641-0-----245747997----------------183223441230699996184335665537613652100 Q gi|254780401|r 123 R-KIGVQML-L-----QEGVDIIIM----------------DDGFHSADLQADFSLIVVNSHRGLGNGLVFPAGPLRVPL 179 (338) Q Consensus 123 R-~~~~~~~-~-----~~~~diiIl----------------DDGfQh~~l~rdl~Ivl~d~~~~~gn~~llPaGpLREp~ 179 (338) - ..+...+ . ...+|.|+. .|........-+--|+++|+.++...-.-. ++ . T Consensus 71 ~~~~~l~~~~~~~~~~~~~~d~iiIE~sG~~~p~~l~~~~~~~~~~~~~~~l~~vi~vVDa~~~~~~~~~~---~~---~ 144 (222) T d1nija1 71 ELEDALLDLLDNLDKGNIQFDRLVIECTGMADPGPIIQTFFSHEVLCQRYLLDGVIALVDAVHADEQMNQF---TI---A 144 (222) T ss_dssp CHHHHHHHHHHHHHHTSCCCSEEEEEEETTCCHHHHHHHHHHSHHHHHHEEEEEEEEEEETTTHHHHHHHC---HH---H T ss_pred HHHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHH---HH---H T ss_conf 67777889999986046776536786224210468999988520144421113402133355444443346---78---9 Q ss_pred HHHHHHHHHHHHCCCCH Q ss_conf 25566514544204412 Q gi|254780401|r 180 SRQLSYVDAILYVGNKK 196 (338) Q Consensus 180 ~~~l~rad~vi~~~~~~ 196 (338) ...+..||++++||.+. T Consensus 145 ~~Qi~~AD~ivlNK~Dl 161 (222) T d1nija1 145 QSQVGYADRILLTKTDV 161 (222) T ss_dssp HHHHHTCSEEEEECTTT T ss_pred HHHHHHCCCCCCCCCCC T ss_conf 99998688302446455 No 2 >d1j8yf2 c.37.1.10 (F:87-297) GTPase domain of the signal sequence recognition protein Ffh {Archaeon Acidianus ambivalens [TaxId: 2283]} Probab=96.29 E-value=0.0027 Score=40.85 Aligned_cols=81 Identities=30% Similarity=0.297 Sum_probs=50.5 Q ss_pred CCEE--EECCEEECCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCEEEECCCCCHHHHCCHHHHHHH---CCCCC Q ss_conf 9889--982300078887489999999985247315987604578777755871456788770421233220---57634 Q gi|254780401|r 44 IPVI--CVGGFVMGGTGKTPTALAIAKAVIDKNLKPGFLSRGYGRKSRISFRVDLEKHSAYDVGDEPLLLAR---RAVTI 118 (338) Q Consensus 44 ~pVI--~VGNitvGGtGKTP~v~~l~~~l~~~g~~~~ilsRGYg~~~~~~~~v~~~~~~~~~vGDEp~lla~---~~pv~ 118 (338) .|.| -||- =|+|||-++.-||.+++++|.+|++++= ++..-.+-|.+.... .+|+. T Consensus 11 ~p~vi~lvGp---tGvGKTTTiAKLA~~~~~~g~kV~lit~----------------Dt~R~ga~eQL~~~a~~l~v~~~ 71 (211) T d1j8yf2 11 IPYVIMLVGV---QGTGKATTAGKLAYFYKKKGFKVGLVGA----------------DVYRPAALEQLQQLGQQIGVPVY 71 (211) T ss_dssp SSEEEEEECS---CCC----HHHHHHHHHHHTTCCEEEEEC----------------CCSSHHHHHHHHHHHHHHTCCEE T ss_pred CCEEEEEECC---CCCCHHHHHHHHHHHHHHCCCCEEEEEE----------------ECCCCCHHHHHHHHCCCCCCCEE T ss_conf 9989999899---9999899999999999977993699972----------------02355156789874014684223 Q ss_pred CCCCHHHHH-------HHHCCCCCCEEEECCC Q ss_conf 652012256-------6410245747997183 Q gi|254780401|r 119 VTSDRKIGV-------QMLLQEGVDIIIMDDG 143 (338) Q Consensus 119 V~~~R~~~~-------~~~~~~~~diiIlDDG 143 (338) +..+..+.+ ..+...+.|+|+.|=. T Consensus 72 ~~~~~~~~~~~~~~a~~~~~~~~~d~IlIDTa 103 (211) T d1j8yf2 72 GEPGEKDVVGIAKRGVEKFLSEKMEIIIVDTA 103 (211) T ss_dssp CCTTCCCHHHHHHHHHHHHHHTTCSEEEEECC T ss_pred ECCCCHHHHHHHHHHHHHHHCCCCCEEEEECC T ss_conf 02441024478999998740267736998537 No 3 >d1np6a_ c.37.1.10 (A:) Molybdopterin-guanine dinucleotide biosynthesis protein MobB {Escherichia coli [TaxId: 562]} Probab=95.78 E-value=0.008 Score=37.47 Aligned_cols=41 Identities=24% Similarity=0.536 Sum_probs=33.1 Q ss_pred CCEEEECCEEECCCCCCHHHHHHHHHHHHCCCCEEEEEECCCC Q ss_conf 9889982300078887489999999985247315987604578 Q gi|254780401|r 44 IPVICVGGFVMGGTGKTPTALAIAKAVIDKNLKPGFLSRGYGR 86 (338) Q Consensus 44 ~pVI~VGNitvGGtGKTP~v~~l~~~l~~~g~~~~ilsRGYg~ 86 (338) +|||+|=-. -|||||-++..|++.|.++|++++++-...++ T Consensus 2 ~Pvi~itG~--~GSGKTTL~~~L~~~l~~~g~~v~v~~~d~~~ 42 (170) T d1np6a_ 2 IPLLAFAAW--SGTGKTTLLKKLIPALCARGIRPGLIKHTHHD 42 (170) T ss_dssp CCEEEEECC--TTSCHHHHHHHHHHHHHHTTCCEEEEEECCC- T ss_pred CCEEEEECC--CCCCHHHHHHHHHHHHHHCCCEEEEECCCCCC T ss_conf 788999918--99989999999999999779768774146655 No 4 >d1xjca_ c.37.1.10 (A:) Molybdopterin-guanine dinucleotide biosynthesis protein MobB {Bacillus stearothermophilus [TaxId: 1422]} Probab=95.68 E-value=0.0062 Score=38.27 Aligned_cols=39 Identities=21% Similarity=0.139 Sum_probs=30.7 Q ss_pred EEEECCEEECCCCCCHHHHHHHHHHHHCCCCEEEEEECCCC Q ss_conf 89982300078887489999999985247315987604578 Q gi|254780401|r 46 VICVGGFVMGGTGKTPTALAIAKAVIDKNLKPGFLSRGYGR 86 (338) Q Consensus 46 VI~VGNitvGGtGKTP~v~~l~~~l~~~g~~~~ilsRGYg~ 86 (338) ||.|.- .-|||||-++..|++.|+++|++++++..-..+ T Consensus 3 ii~I~G--~~gSGKTTli~~l~~~L~~~g~~v~vik~d~~~ 41 (165) T d1xjca_ 3 VWQVVG--YKHSGKTTLMEKWVAAAVREGWRVGTVKHHGHG 41 (165) T ss_dssp EEEEEC--CTTSSHHHHHHHHHHHHHHTTCCEEEEECCC-- T ss_pred EEEEEE--CCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCC T ss_conf 999980--999989999999999998679837999831676 No 5 >d2qy9a2 c.37.1.10 (A:285-495) GTPase domain of the signal recognition particle receptor FtsY {Escherichia coli [TaxId: 562]} Probab=95.52 E-value=0.008 Score=37.48 Aligned_cols=79 Identities=18% Similarity=0.244 Sum_probs=48.5 Q ss_pred EEEECCEEECCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCEEEECCCCCHHHHCCHHH-HHHH--CCCCCCCCC Q ss_conf 8998230007888748999999998524731598760457877775587145678877042123-3220--576346520 Q gi|254780401|r 46 VICVGGFVMGGTGKTPTALAIAKAVIDKNLKPGFLSRGYGRKSRISFRVDLEKHSAYDVGDEPL-LLAR--RAVTIVTSD 122 (338) Q Consensus 46 VI~VGNitvGGtGKTP~v~~l~~~l~~~g~~~~ilsRGYg~~~~~~~~v~~~~~~~~~vGDEp~-lla~--~~pv~V~~~ 122 (338) +.-||- =|+|||-++.-||.+++++|.+|++++ .++..-.+=|-+ .+++ ..|+.+..+ T Consensus 12 i~lvGp---tGvGKTTTiAKLA~~~~~~g~kV~lit----------------~Dt~R~gA~eQL~~~a~~l~v~~~~~~~ 72 (211) T d2qy9a2 12 ILMVGV---NGVGKTTTIGKLARQFEQQGKSVMLAA----------------GDTFRAAAVEQLQVWGQRNNIPVIAQHT 72 (211) T ss_dssp EEEECC---TTSCHHHHHHHHHHHHHTTTCCEEEEC----------------CCTTCHHHHHHHHHHHHHTTCCEECCST T ss_pred EEEECC---CCCCHHHHHHHHHHHHHHCCCCEEEEE----------------CCCCCCCCHHHHHHHHHHCCCCCCCCCC T ss_conf 999899---999989999999999997799479982----------------3213666120455543433886211356 Q ss_pred HHHHHHHH-------CCCCCCEEEECCC Q ss_conf 12256641-------0245747997183 Q gi|254780401|r 123 RKIGVQML-------LQEGVDIIIMDDG 143 (338) Q Consensus 123 R~~~~~~~-------~~~~~diiIlDDG 143 (338) ..+-...+ ...+.|+|+.|=. T Consensus 73 ~~d~~~~l~~~~~~a~~~~~d~ilIDTa 100 (211) T d2qy9a2 73 GADSASVIFDAIQAAKARNIDVLIADTA 100 (211) T ss_dssp TCCHHHHHHHHHHHHHHTTCSEEEECCC T ss_pred CCCHHHHHHHHHHHHHHCCCCEEEECCC T ss_conf 8779999999999998769988996568 No 6 >d1vmaa2 c.37.1.10 (A:82-294) GTPase domain of the signal recognition particle receptor FtsY {Thermotoga maritima [TaxId: 2336]} Probab=95.39 E-value=0.0091 Score=37.05 Aligned_cols=79 Identities=24% Similarity=0.321 Sum_probs=47.5 Q ss_pred EEEECCEEECCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCEEEECCCCCHHHHCCHHHHH-HH--CCCCCCCCC Q ss_conf 899823000788874899999999852473159876045787777558714567887704212332-20--576346520 Q gi|254780401|r 46 VICVGGFVMGGTGKTPTALAIAKAVIDKNLKPGFLSRGYGRKSRISFRVDLEKHSAYDVGDEPLLL-AR--RAVTIVTSD 122 (338) Q Consensus 46 VI~VGNitvGGtGKTP~v~~l~~~l~~~g~~~~ilsRGYg~~~~~~~~v~~~~~~~~~vGDEp~ll-a~--~~pv~V~~~ 122 (338) +.-|| .=|+|||-++.-||.++.++|.+|++++=- +.+-.+-|-+.. ++ ..|+.+..+ T Consensus 14 i~lvG---ptGvGKTTTiAKLAa~~~~~~~kV~lit~D----------------t~R~gA~eQL~~~a~~l~i~~~~~~~ 74 (213) T d1vmaa2 14 IMVVG---VNGTGKTTSCGKLAKMFVDEGKSVVLAAAD----------------TFRAAAIEQLKIWGERVGATVISHSE 74 (213) T ss_dssp EEEEC---CTTSSHHHHHHHHHHHHHHTTCCEEEEEEC----------------TTCHHHHHHHHHHHHHHTCEEECCST T ss_pred EEEEC---CCCCCHHHHHHHHHHHHHHCCCCEEEEEEC----------------CCCCCHHHHHHHHHHHCCCCCCCCCC T ss_conf 99989---999988999999999999779906999601----------------33420467888776432764103677 Q ss_pred HHHHHH-------HHCCCCCCEEEECCC Q ss_conf 122566-------410245747997183 Q gi|254780401|r 123 RKIGVQ-------MLLQEGVDIIIMDDG 143 (338) Q Consensus 123 R~~~~~-------~~~~~~~diiIlDDG 143 (338) ...-+. .....+.|+|+.|=. T Consensus 75 ~~d~~~~~~~~~~~~~~~~~d~ilIDTa 102 (213) T d1vmaa2 75 GADPAAVAFDAVAHALARNKDVVIIDTA 102 (213) T ss_dssp TCCHHHHHHHHHHHHHHTTCSEEEEEEC T ss_pred CCCHHHHHHHHHHHHHHCCCCEEEEECC T ss_conf 7768998788789998769998998245 No 7 >d1okkd2 c.37.1.10 (D:97-303) GTPase domain of the signal recognition particle receptor FtsY {Thermus aquaticus [TaxId: 271]} Probab=95.32 E-value=0.008 Score=37.46 Aligned_cols=80 Identities=20% Similarity=0.254 Sum_probs=48.9 Q ss_pred EEEECCEEECCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCEEEECCCCCHHHHCCHHHH-HHH--CCCCCCCCC Q ss_conf 89982300078887489999999985247315987604578777755871456788770421233-220--576346520 Q gi|254780401|r 46 VICVGGFVMGGTGKTPTALAIAKAVIDKNLKPGFLSRGYGRKSRISFRVDLEKHSAYDVGDEPLL-LAR--RAVTIVTSD 122 (338) Q Consensus 46 VI~VGNitvGGtGKTP~v~~l~~~l~~~g~~~~ilsRGYg~~~~~~~~v~~~~~~~~~vGDEp~l-la~--~~pv~V~~~ 122 (338) +..||- =|+|||-++.-||.+++++|.+|++++=- +.+-.+=|.+- +++ .+|+++..+ T Consensus 9 i~lvGp---tGvGKTTTiaKLA~~~~~~g~kV~lit~D----------------t~R~gA~eQL~~~a~~l~i~~~~~~~ 69 (207) T d1okkd2 9 VLVVGV---NGVGKTTTIAKLGRYYQNLGKKVMFCAGD----------------TFRAAGGTQLSEWGKRLSIPVIQGPE 69 (207) T ss_dssp EEEECS---TTSSHHHHHHHHHHHHHTTTCCEEEECCC----------------CSSTTHHHHHHHHHHHHTCCEECCCT T ss_pred EEEECC---CCCCHHHHHHHHHHHHHHCCCCEEEEEEC----------------CCCCCCHHHHHHCCCCCCCEEEECCC T ss_conf 999899---99988999999999999779907999813----------------66654026676405456823896167 Q ss_pred HHHHHHH-------HCCCCCCEEEECCCC Q ss_conf 1225664-------102457479971832 Q gi|254780401|r 123 RKIGVQM-------LLQEGVDIIIMDDGF 144 (338) Q Consensus 123 R~~~~~~-------~~~~~~diiIlDDGf 144 (338) ....... ....+.|+|+.|=.= T Consensus 70 ~~d~~~~~~~~~~~~~~~~~d~ilIDTaG 98 (207) T d1okkd2 70 GTDPAALAYDAVQAMKARGYDLLFVDTAG 98 (207) T ss_dssp TCCHHHHHHHHHHHHHHHTCSEEEECCCC T ss_pred CCCHHHHHHHHHHHHHHCCCCEEECCCCC T ss_conf 74278899998999998799999717522 No 8 >d1ihua1 c.37.1.10 (A:1-296) Arsenite-translocating ATPase ArsA {Escherichia coli [TaxId: 562]} Probab=95.12 E-value=0.0071 Score=37.82 Aligned_cols=29 Identities=28% Similarity=0.355 Sum_probs=27.5 Q ss_pred ECCCCCCHHHHHHHHHHHHCCCCEEEEEE Q ss_conf 07888748999999998524731598760 Q gi|254780401|r 54 MGGTGKTPTALAIAKAVIDKNLKPGFLSR 82 (338) Q Consensus 54 vGGtGKTP~v~~l~~~l~~~g~~~~ilsR 82 (338) =||+|||-++..||..|.++|++|.+++= T Consensus 16 KGGVGKTTvaa~lA~~lA~~G~rVLlvD~ 44 (296) T d1ihua1 16 KGGVGKTSISCATAIRLAEQGKRVLLVST 44 (296) T ss_dssp STTSSHHHHHHHHHHHHHHTTCCEEEEEC T ss_pred CCCCHHHHHHHHHHHHHHHCCCCEEEEEC T ss_conf 98674999999999999978997899957 No 9 >d1ls1a2 c.37.1.10 (A:89-295) GTPase domain of the signal sequence recognition protein Ffh {Thermus aquaticus [TaxId: 271]} Probab=95.02 E-value=0.012 Score=36.22 Aligned_cols=28 Identities=32% Similarity=0.425 Sum_probs=26.3 Q ss_pred ECCCCCCHHHHHHHHHHHHCCCCEEEEE Q ss_conf 0788874899999999852473159876 Q gi|254780401|r 54 MGGTGKTPTALAIAKAVIDKNLKPGFLS 81 (338) Q Consensus 54 vGGtGKTP~v~~l~~~l~~~g~~~~ils 81 (338) ..|+|||-++.-||.+++++|++|++++ T Consensus 18 p~GvGKTTTiaKLA~~~~~~g~kV~lit 45 (207) T d1ls1a2 18 LQGSGKTTTAAKLALYYKGKGRRPLLVA 45 (207) T ss_dssp CTTTTHHHHHHHHHHHHHHTTCCEEEEE T ss_pred CCCCCHHHHHHHHHHHHHHCCCCEEEEE T ss_conf 9999889999999999997799279995 No 10 >d1g3qa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Pyrococcus furiosus [TaxId: 2261]} Probab=94.89 E-value=0.013 Score=36.02 Aligned_cols=36 Identities=28% Similarity=0.291 Sum_probs=31.6 Q ss_pred CEEEECCEEECCCCCCHHHHHHHHHHHHCCCCEEEEE Q ss_conf 8899823000788874899999999852473159876 Q gi|254780401|r 45 PVICVGGFVMGGTGKTPTALAIAKAVIDKNLKPGFLS 81 (338) Q Consensus 45 pVI~VGNitvGGtGKTP~v~~l~~~l~~~g~~~~ils 81 (338) .||+|-|.. ||+|||-++.-||..|.++|++|+++- T Consensus 3 ~vIav~~~k-GGvGKTtia~nLA~~la~~g~~VlliD 38 (237) T d1g3qa_ 3 RIISIVSGK-GGTGKTTVTANLSVALGDRGRKVLAVD 38 (237) T ss_dssp EEEEEECSS-TTSSHHHHHHHHHHHHHHTTCCEEEEE T ss_pred EEEEEECCC-CCCCHHHHHHHHHHHHHHCCCCEEEEE T ss_conf 299998999-988199999999999996899899994 No 11 >d1cp2a_ c.37.1.10 (A:) Nitrogenase iron protein {Clostridium pasteurianum [TaxId: 1501]} Probab=94.44 E-value=0.019 Score=34.84 Aligned_cols=35 Identities=17% Similarity=0.248 Sum_probs=30.1 Q ss_pred EEEECCEEECCCCCCHHHHHHHHHHHHCCCCEEEEEE Q ss_conf 8998230007888748999999998524731598760 Q gi|254780401|r 46 VICVGGFVMGGTGKTPTALAIAKAVIDKNLKPGFLSR 82 (338) Q Consensus 46 VI~VGNitvGGtGKTP~v~~l~~~l~~~g~~~~ilsR 82 (338) +|+|=+ =||+|||-++.-||..|.++|++|.++-- T Consensus 3 ~Iai~g--KGGvGKTT~a~nLA~~LA~~G~rVllID~ 37 (269) T d1cp2a_ 3 QVAIYG--KGGIGKSTTTQNLTSGLHAMGKTIMVVGC 37 (269) T ss_dssp EEEEEE--CTTSSHHHHHHHHHHHHHTTTCCEEEEEE T ss_pred EEEEEC--CCCCCHHHHHHHHHHHHHHCCCCEEEEEC T ss_conf 999989--98577999999999999968995899963 No 12 >d2gc6a2 c.72.2.2 (A:1-296) Folylpolyglutamate synthetase {Lactobacillus casei [TaxId: 1582]} Probab=94.42 E-value=0.18 Score=27.84 Aligned_cols=109 Identities=23% Similarity=0.244 Sum_probs=63.2 Q ss_pred HHHHHHHCCCCCCCCCEEEECCEEECCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCEEEECCCCCHHHHCCHHH Q ss_conf 99997404643388988998230007888748999999998524731598760457877775587145678877042123 Q gi|254780401|r 30 SSKLMKRGQRLHAPIPVICVGGFVMGGTGKTPTALAIAKAVIDKNLKPGFLSRGYGRKSRISFRVDLEKHSAYDVGDEPL 109 (338) Q Consensus 30 ~~~~~~~~~~~~~~~pVI~VGNitvGGtGKTP~v~~l~~~l~~~g~~~~ilsRGYg~~~~~~~~v~~~~~~~~~vGDEp~ 109 (338) ..++-.++.+. -..+||.| +|=-|||-++.++...|++.|+++|..+-.+.............. +.||.+ T Consensus 26 ~~~l~~lg~P~-~~lkvI~V----TGTNGKtST~~~i~~IL~~~G~kvG~~tSP~~~~~~e~~~~~~~~-----i~~~~~ 95 (296) T d2gc6a2 26 LTLLHALGNPQ-QQGRYIHV----TGTNGKGSAANAIAHVLEASGLTVGLYTAPFIMRFNERIMIDHEP-----IPDAAL 95 (296) T ss_dssp HHHHHHTTCGG-GSSCEEEE----ECSSSHHHHHHHHHHHHHHTTCCEEEECSSCSSCGGGGEEETTEE-----CCHHHH T ss_pred HHHHHHCCCCH-HHCCEEEE----ECCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHCCCCCC-----CCHHHH T ss_conf 99999829906-53987999----565768999999999998659760355146423200100001368-----868999 Q ss_pred HHH-------------HC---CCCCCCCCHHHHHHHHCCCCCCEEEECCCCCCCC Q ss_conf 322-------------05---7634652012256641024574799718322344 Q gi|254780401|r 110 LLA-------------RR---AVTIVTSDRKIGVQMLLQEGVDIIIMDDGFHSAD 148 (338) Q Consensus 110 lla-------------~~---~pv~V~~~R~~~~~~~~~~~~diiIlDDGfQh~~ 148 (338) ... .. ......--...+..+..+..+|+.++..|+..+. T Consensus 96 ~~~~~~i~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~d~~i~e~g~g~~~ 150 (296) T d2gc6a2 96 VNAVAFVRAALERLQQQQADFNVTEFEFITALGYWYFRQRQVDVAVIEVGIGGDT 150 (296) T ss_dssp HHHHHHHHHHHHHHHHHSTTCCCCHHHHHHHHHHHHHHHTTCSEEEEECSSSSTT T ss_pred HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH T ss_conf 9999999887776776426777647999899999999875230566546777766 No 13 >d1o5za2 c.72.2.2 (A:-2-293) Folylpolyglutamate synthetase {Thermotoga maritima [TaxId: 2336]} Probab=94.29 E-value=0.14 Score=28.74 Aligned_cols=110 Identities=18% Similarity=0.185 Sum_probs=58.2 Q ss_pred HHHHCCCCCCCCCEEEECCEEECCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCEEEECCCCCHHHHCCHHHHHH Q ss_conf 97404643388988998230007888748999999998524731598760457877775587145678877042123322 Q gi|254780401|r 33 LMKRGQRLHAPIPVICVGGFVMGGTGKTPTALAIAKAVIDKNLKPGFLSRGYGRKSRISFRVDLEKHSAYDVGDEPLLLA 112 (338) Q Consensus 33 ~~~~~~~~~~~~pVI~VGNitvGGtGKTP~v~~l~~~l~~~g~~~~ilsRGYg~~~~~~~~v~~~~~~~~~vGDEp~lla 112 (338) +..++.+ .-+.+||.| +|=-|||-++.++...|+..|++++.++-+..-...+..+.....-+..+..+-.-.+. T Consensus 33 l~~lg~P-~~~lkvI~V----TGTNGKTSt~~~i~~IL~~~g~~~g~~~s~~~~~~~e~~~~~~~~i~~~~l~~~~~~v~ 107 (296) T d1o5za2 33 LSKLGNP-HLEYKTIHI----GGTNGKGSVANMVSNILVSQGYRVGSYYSPHLSTFRERIRLNEEYISEEDVVKIYETME 107 (296) T ss_dssp HHHTTCG-GGSSEEEEE----ECSSSHHHHHHHHHHHHHHHTCCEEEECCSCSSCGGGGEEETTEECCHHHHHHHHHHHH T ss_pred HHHCCCC-HHHCCEEEE----EECCCHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCCEECCCEEEHHHHHHHHHHHH T ss_conf 9980992-664987999----70386899999999999975987543225654445543132374010599999999888 Q ss_pred -----HCC-----CCCCCCCHHHHHHHHCCCCCCEEEECCCCCCC Q ss_conf -----057-----63465201225664102457479971832234 Q gi|254780401|r 113 -----RRA-----VTIVTSDRKIGVQMLLQEGVDIIIMDDGFHSA 147 (338) Q Consensus 113 -----~~~-----pv~V~~~R~~~~~~~~~~~~diiIlDDGfQh~ 147 (338) ... +.....--..+.....+.++|+.|+..|+... T Consensus 108 ~~~~~~~~~~~~~~t~~e~~t~~a~~~~~~~~~d~~i~e~~~~g~ 152 (296) T d1o5za2 108 PILNELDKEEIFSPSFFEVVTAMAFLYFAEKNVDIAVLEVGLGGR 152 (296) T ss_dssp HHHHHHTTSTTTCCCHHHHHHHHHHHHHHHTTCSEEEEECSSSST T ss_pred HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEHHHCCC T ss_conf 765432014678886378899999997542033101210121020 No 14 >d1ihua2 c.37.1.10 (A:308-586) Arsenite-translocating ATPase ArsA {Escherichia coli [TaxId: 562]} Probab=94.27 E-value=0.014 Score=35.74 Aligned_cols=32 Identities=31% Similarity=0.364 Sum_probs=28.5 Q ss_pred ECCCCCCHHHHHHHHHHHHCCCCEEEEEECCC Q ss_conf 07888748999999998524731598760457 Q gi|254780401|r 54 MGGTGKTPTALAIAKAVIDKNLKPGFLSRGYG 85 (338) Q Consensus 54 vGGtGKTP~v~~l~~~l~~~g~~~~ilsRGYg 85 (338) =||+|||-++..||..|.++|++|.++.---. T Consensus 28 KGGVGKTT~a~nLA~~lA~~G~rVllvD~Dp~ 59 (279) T d1ihua2 28 KGGVGKTTMAAAIAVRLADMGFDVHLTTSDPA 59 (279) T ss_dssp STTSSHHHHHHHHHHHHHHTTCCEEEEESCCC T ss_pred CCCCCHHHHHHHHHHHHHHCCCCEEEEECCCC T ss_conf 99887899999999999978993899937999 No 15 >d2afhe1 c.37.1.10 (E:1-289) Nitrogenase iron protein {Azotobacter vinelandii [TaxId: 354]} Probab=93.83 E-value=0.031 Score=33.25 Aligned_cols=34 Identities=21% Similarity=0.238 Sum_probs=28.7 Q ss_pred EEEECCEEECCCCCCHHHHHHHHHHHHCCCCEEEEE Q ss_conf 899823000788874899999999852473159876 Q gi|254780401|r 46 VICVGGFVMGGTGKTPTALAIAKAVIDKNLKPGFLS 81 (338) Q Consensus 46 VI~VGNitvGGtGKTP~v~~l~~~l~~~g~~~~ils 81 (338) +|.| | -=||+|||-++.-||..|.++|++|.+|= T Consensus 4 ~Iai-s-gKGGVGKTT~a~NLA~~LA~~G~rVLlID 37 (289) T d2afhe1 4 QCAI-Y-GKGGIGKSTTTQNLVAALAEMGKKVMIVG 37 (289) T ss_dssp EEEE-E-ECTTSSHHHHHHHHHHHHHHTTCCEEEEE T ss_pred EEEE-E-CCCCCCHHHHHHHHHHHHHHCCCCEEEEE T ss_conf 8999-8-99987799999999999997899789995 No 16 >d1gm5a3 c.37.1.19 (A:286-549) RecG helicase domain {Thermotoga maritima [TaxId: 2336]} Probab=93.05 E-value=0.013 Score=36.08 Aligned_cols=102 Identities=15% Similarity=0.170 Sum_probs=60.8 Q ss_pred CCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCEEEECCCCC------HHHHCCHHHHHHHCCCCCCCCCHHHHHH Q ss_conf 7888748999999998524731598760457877775587145678------8770421233220576346520122566 Q gi|254780401|r 55 GGTGKTPTALAIAKAVIDKNLKPGFLSRGYGRKSRISFRVDLEKHS------AYDVGDEPLLLARRAVTIVTSDRKIGVQ 128 (338) Q Consensus 55 GGtGKTP~v~~l~~~l~~~g~~~~ilsRGYg~~~~~~~~v~~~~~~------~~~vGDEp~lla~~~pv~V~~~R~~~~~ 128 (338) =|+|||=+.+..+....+.|++++++. |..+-...|- -...|.+..++... .-.++|.+... T Consensus 113 vGSGKT~Va~~a~~~~~~~g~q~~~m~---------Pt~~La~Qh~~~~~~~f~~~~~~v~~l~~~---~~~~~r~~~~~ 180 (264) T d1gm5a3 113 VGSGKTVVAQLAILDNYEAGFQTAFMV---------PTSILAIQHYRRTVESFSKFNIHVALLIGA---TTPSEKEKIKS 180 (264) T ss_dssp SSSSHHHHHHHHHHHHHHHTSCEEEEC---------SCHHHHHHHHHHHHHHHTCSSCCEEECCSS---SCHHHHHHHHH T ss_pred CCCCCCHHHHHHHHHHHHCCCCEEEEE---------EHHHHHHHHHHHHHHHHHHCCCCCEEECCC---CCHHHHHHHHH T ss_conf 355665999999999885135505874---------047665789999988620123121110110---13699999999 Q ss_pred HHCCCCCCEEEECCCC-CCCCCCCEEEEEEECCCCCCCCCC Q ss_conf 4102457479971832-234412306999961843356655 Q gi|254780401|r 129 MLLQEGVDIIIMDDGF-HSADLQADFSLIVVNSHRGLGNGL 168 (338) Q Consensus 129 ~~~~~~~diiIlDDGf-Qh~~l~rdl~Ivl~d~~~~~gn~~ 168 (338) .+..-.+++||---.+ |..--.+++.+|++|-+..||-.+ T Consensus 181 ~~~~g~~~iiIGThsl~~~~~~f~~LglviiDEqH~fgv~Q 221 (264) T d1gm5a3 181 GLRNGQIDVVIGTHALIQEDVHFKNLGLVIIDEQHRFGVKQ 221 (264) T ss_dssp HHHSSCCCEEEECTTHHHHCCCCSCCCEEEEESCCCC---- T ss_pred HHHCCCCCEEEEEHHHHCCCCCCCCCCEEEECCCCCCCHHH T ss_conf 99779979999653885489874556225632421002434 No 17 >d1byia_ c.37.1.10 (A:) Dethiobiotin synthetase {Escherichia coli [TaxId: 562]} Probab=92.69 E-value=0.037 Score=32.75 Aligned_cols=27 Identities=19% Similarity=0.164 Sum_probs=25.3 Q ss_pred EC-CCCCCHHHHHHHHHHHHCCCCEEEE Q ss_conf 07-8887489999999985247315987 Q gi|254780401|r 54 MG-GTGKTPTALAIAKAVIDKNLKPGFL 80 (338) Q Consensus 54 vG-GtGKTP~v~~l~~~l~~~g~~~~il 80 (338) .| |.|||-++.-||..|.++|++|.++ T Consensus 9 t~~GVGKTtvs~~La~aLa~~G~rVl~i 36 (224) T d1byia_ 9 TDTEVGKTVASCALLQAAKAAGYRTAGY 36 (224) T ss_dssp SSTTSCHHHHHHHHHHHHHHTTCCEEEE T ss_pred CCCCCCHHHHHHHHHHHHHHCCCEEEEE T ss_conf 9999429999999999999779939998 No 18 >d2eyqa3 c.37.1.19 (A:546-778) Transcription-repair coupling factor, TRCF {Escherichia coli [TaxId: 562]} Probab=92.55 E-value=0.041 Score=32.40 Aligned_cols=101 Identities=17% Similarity=0.107 Sum_probs=58.2 Q ss_pred ECCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCEEEECCCCCHHHHCCHHHHHHHCCCCC-------CC-CCHHH Q ss_conf 07888748999999998524731598760457877775587145678877042123322057634-------65-20122 Q gi|254780401|r 54 MGGTGKTPTALAIAKAVIDKNLKPGFLSRGYGRKSRISFRVDLEKHSAYDVGDEPLLLARRAVTI-------VT-SDRKI 125 (338) Q Consensus 54 vGGtGKTP~v~~l~~~l~~~g~~~~ilsRGYg~~~~~~~~v~~~~~~~~~vGDEp~lla~~~pv~-------V~-~~R~~ 125 (338) +=|+|||=+.+..+....+.|++++++. |...-...+ .. +---+....|+- ++ +.|.+ T Consensus 84 dvGsGKT~V~~~a~~~~~~~g~qv~~l~---------Pt~~La~Q~-~~----~~~~~~~~~~~~v~~l~~~~~~~~~~~ 149 (233) T d2eyqa3 84 DVGFGKTEVAMRAAFLAVDNHKQVAVLV---------PTTLLAQQH-YD----NFRDRFANWPVRIEMISRFRSAKEQTQ 149 (233) T ss_dssp CCCTTTHHHHHHHHHHHHTTTCEEEEEC---------SSHHHHHHH-HH----HHHHHSTTTTCCEEEESTTSCHHHHHH T ss_pred CCCCCCHHHHHHHHHHHHHCCCCEEEEC---------CHHHHHHHH-HH----HHHHHHHHCCCEEEECCCCCCCHHHHH T ss_conf 8887728999999999997689569974---------688767999-99----999987247977976357653126999 Q ss_pred HHHHHCCCCCCEEEECC-CCCCCCCCCEEEEEEECCCCCCCCCC Q ss_conf 56641024574799718-32234412306999961843356655 Q gi|254780401|r 126 GVQMLLQEGVDIIIMDD-GFHSADLQADFSLIVVNSHRGLGNGL 168 (338) Q Consensus 126 ~~~~~~~~~~diiIlDD-GfQh~~l~rdl~Ivl~d~~~~~gn~~ 168 (338) ....+.+..+++||=-- .+|..--.+++-++++|-+..||-.+ T Consensus 150 ~~~~~~~g~~~iviGths~l~~~~~f~~LgLiIiDEeH~fg~kQ 193 (233) T d2eyqa3 150 ILAEVAEGKIDILIGTHKLLQSDVKFKDLGLLIVDEEHRFGVRH 193 (233) T ss_dssp HHHHHHTTCCSEEEECTHHHHSCCCCSSEEEEEEESGGGSCHHH T ss_pred HHHHHHCCCCCEEEEEHHHHCCCCCCCCCCCEEEECHHHHHHHH T ss_conf 99999679978897420233067765554630222312332578 No 19 >d1hyqa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Probab=92.45 E-value=0.042 Score=32.37 Aligned_cols=36 Identities=25% Similarity=0.280 Sum_probs=30.4 Q ss_pred CEEEECCEEECCCCCCHHHHHHHHHHHHCCCCEEEEE Q ss_conf 8899823000788874899999999852473159876 Q gi|254780401|r 45 PVICVGGFVMGGTGKTPTALAIAKAVIDKNLKPGFLS 81 (338) Q Consensus 45 pVI~VGNitvGGtGKTP~v~~l~~~l~~~g~~~~ils 81 (338) .||+|-|. -||.|||-++.-||..|.++|++|+++- T Consensus 2 kvIav~s~-KGGvGKTtia~nlA~~la~~g~~VlliD 37 (232) T d1hyqa_ 2 RTITVASG-KGGTGKTTITANLGVALAQLGHDVTIVD 37 (232) T ss_dssp EEEEEEES-SSCSCHHHHHHHHHHHHHHTTCCEEEEE T ss_pred EEEEEECC-CCCCHHHHHHHHHHHHHHHCCCCEEEEE T ss_conf 79999799-9998099999999999996899899995 No 20 >d1a7ja_ c.37.1.6 (A:) Phosphoribulokinase {Rhodobacter sphaeroides [TaxId: 1063]} Probab=91.52 E-value=0.11 Score=29.41 Aligned_cols=38 Identities=18% Similarity=0.299 Sum_probs=31.3 Q ss_pred CCCEEEECCEEECCCCCCHHHHHHHHHHHHCCCCEEEEEE Q ss_conf 8988998230007888748999999998524731598760 Q gi|254780401|r 43 PIPVICVGGFVMGGTGKTPTALAIAKAVIDKNLKPGFLSR 82 (338) Q Consensus 43 ~~pVI~VGNitvGGtGKTP~v~~l~~~l~~~g~~~~ilsR 82 (338) +.|||+|.-- -|+|||-++..|.+.|...|.++++|+= T Consensus 3 k~pIIgIaG~--SGSGKTTva~~l~~i~~~~~v~~~iI~~ 40 (288) T d1a7ja_ 3 KHPIISVTGS--SGAGTSTVKHTFDQIFRREGVKAVSIEG 40 (288) T ss_dssp TSCEEEEESC--C---CCTHHHHHHHHHHHHTCCEEEEEG T ss_pred CCCEEEEECC--CCCCHHHHHHHHHHHHHHCCCCEEEEEC T ss_conf 8889999899--9780999999999997156997699947 No 21 >d2qm8a1 c.37.1.10 (A:5-327) Metallochaperone MeaB {Methylobacterium extorquens [TaxId: 408]} Probab=91.19 E-value=0.16 Score=28.28 Aligned_cols=133 Identities=15% Similarity=0.133 Sum_probs=72.4 Q ss_pred CCCEEEECCEEECCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCEEEECCCCCHHHHCCHHHHHHHC-CC-CC-- Q ss_conf 898899823000788874899999999852473159876045787777558714567887704212332205-76-34-- Q gi|254780401|r 43 PIPVICVGGFVMGGTGKTPTALAIAKAVIDKNLKPGFLSRGYGRKSRISFRVDLEKHSAYDVGDEPLLLARR-AV-TI-- 118 (338) Q Consensus 43 ~~pVI~VGNitvGGtGKTP~v~~l~~~l~~~g~~~~ilsRGYg~~~~~~~~v~~~~~~~~~vGDEp~lla~~-~p-v~-- 118 (338) ..++|. =-=..|+|||-++..|++.+.+.|++++|+.--=-+...+ -.-.||--.|.... .+ ++ T Consensus 50 ~~~~ig--itG~pGaGKSTli~~l~~~~~~~g~~vaViavDpss~~~g----------g~llgdr~rm~~~~~~~~~~ir 117 (323) T d2qm8a1 50 RAIRVG--ITGVPGVGKSTTIDALGSLLTAAGHKVAVLAVDPSSTRTG----------GSILGDKTRMARLAIDRNAFIR 117 (323) T ss_dssp CSEEEE--EECCTTSCHHHHHHHHHHHHHHTTCCEEEEEECGGGGSSC----------CCSSCCGGGSTTGGGCTTEEEE T ss_pred CCEEEE--EECCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHH----------HCCCCCHHHHHHHHCCCCEEEC T ss_conf 815986--1179988899999999998763687513443465547877----------5064101337887503440112 Q ss_pred ----------CCCCHHHHHHHHCCCCCCEEEECCC--CCCC---CCCCEEEEEEECCCCCCCCCCCCCCHHHHHCCHHHH Q ss_conf ----------6520122566410245747997183--2234---412306999961843356655376136521002556 Q gi|254780401|r 119 ----------VTSDRKIGVQMLLQEGVDIIIMDDG--FHSA---DLQADFSLIVVNSHRGLGNGLVFPAGPLRVPLSRQL 183 (338) Q Consensus 119 ----------V~~~R~~~~~~~~~~~~diiIlDDG--fQh~---~l~rdl~Ivl~d~~~~~gn~~llPaGpLREp~~~~l 183 (338) ++..-..++..+...++|+|+..-. -|.. ...-|..+++.... .|. =+++ +- ..-+ T Consensus 118 ~~~~~~~~gg~~~~~~~~i~~~~~~g~d~iiiETVG~gq~e~~~~~~~D~~v~v~~p~--~GD--~iQ~----~k-~gil 188 (323) T d2qm8a1 118 PSPSSGTLGGVAAKTRETMLLCEAAGFDVILVETVGVGQSETAVADLTDFFLVLMLPG--AGD--ELQG----IK-KGIF 188 (323) T ss_dssp CCCCCSSHHHHHHHHHHHHHHHHHTTCCEEEEEECSSSSCHHHHHTTSSEEEEEECSC--C------------CC-TTHH T ss_pred CCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHCCCCEEEEEEECC--CHH--HHHH----HH-HHHH T ss_conf 6653453311067789999764148998589863233321466533665489986143--245--5656----32-3476 Q ss_pred HHHHHHHHCCCCH Q ss_conf 6514544204412 Q gi|254780401|r 184 SYVDAILYVGNKK 196 (338) Q Consensus 184 ~rad~vi~~~~~~ 196 (338) ..||++++||.+. T Consensus 189 E~aDi~vvNKaD~ 201 (323) T d2qm8a1 189 ELADMIAVNKADD 201 (323) T ss_dssp HHCSEEEEECCST T ss_pred HHHHEEEEECCCC T ss_conf 5402046754245 No 22 >d2p67a1 c.37.1.10 (A:1-327) LAO/AO transport system kinase ArgK {Escherichia coli [TaxId: 562]} Probab=90.64 E-value=0.19 Score=27.72 Aligned_cols=134 Identities=14% Similarity=0.152 Sum_probs=73.5 Q ss_pred CCCEEEECCEEECCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCEEEECCCCCHHHHCCHHHHHHHC--CCCC-- Q ss_conf 898899823000788874899999999852473159876045787777558714567887704212332205--7634-- Q gi|254780401|r 43 PIPVICVGGFVMGGTGKTPTALAIAKAVIDKNLKPGFLSRGYGRKSRISFRVDLEKHSAYDVGDEPLLLARR--AVTI-- 118 (338) Q Consensus 43 ~~pVI~VGNitvGGtGKTP~v~~l~~~l~~~g~~~~ilsRGYg~~~~~~~~v~~~~~~~~~vGDEp~lla~~--~pv~-- 118 (338) ..++|+| .=..|+|||-++..|++.+.+.|.+++|+.=.=.+.. +...-.||.-.|-... ..++ T Consensus 53 ~~~~Igi--tG~pGaGKSTLi~~l~~~~~~~g~~vavlavDpss~~----------~ggailgdr~rm~~~~~~~~~~ir 120 (327) T d2p67a1 53 NTLRLGV--TGTPGAGKSTFLEAFGMLLIREGLKVAVIAVDPSSPV----------TGGSILGDKTRMNDLARAEAAFIR 120 (327) T ss_dssp CSEEEEE--EECTTSCHHHHHHHHHHHHHHTTCCEEEEEECCC-------------------------CTTTTCTTEEEE T ss_pred CCEEEEE--ECCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCEEE----------ECCCCCCCHHHHHHHCCCCCCCCC T ss_conf 8328974--3899998999999999999756983322037776100----------065155413678874056541015 Q ss_pred ----------CCCCHHHHHHHHCCCCCCEEEECC---CCCCCCC--CCEEEEEEECCCCCCCCC-CCCCCHHHHHCCHHH Q ss_conf ----------652012256641024574799718---3223441--230699996184335665-537613652100255 Q gi|254780401|r 119 ----------VTSDRKIGVQMLLQEGVDIIIMDD---GFHSADL--QADFSLIVVNSHRGLGNG-LVFPAGPLRVPLSRQ 182 (338) Q Consensus 119 ----------V~~~R~~~~~~~~~~~~diiIlDD---GfQh~~l--~rdl~Ivl~d~~~~~gn~-~llPaGpLREp~~~~ 182 (338) ++..=..++..+...+.|+|+..- |-.-..+ .-|.-+++++.. .|.. +.+=+|- T Consensus 121 ~~~~~g~lgg~~~~~~~~~~~~~~~g~d~iliEtvG~gq~e~~i~~~aD~~l~v~~P~--~Gd~iq~~k~gi-------- 190 (327) T d2p67a1 121 PVPSSGHLGGASQRARELMLLCEAAGYDVVIVETVGVGQSETEVARMVDCFISLQIAG--GGDDLQGIKKGL-------- 190 (327) T ss_dssp EECC-----CHHHHHHHHHHHHHHTTCSEEEEEEECCTTHHHHHHTTCSEEEEEECC--------CCCCHHH-------- T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHCCCEEEEEECCC--CCHHHHHHCHHH-------- T ss_conf 6555344442033205789998864998278750321121023440354389973688--725555422014-------- Q ss_pred HHHHHHHHHCCCCHHH Q ss_conf 6651454420441245 Q gi|254780401|r 183 LSYVDAILYVGNKKNV 198 (338) Q Consensus 183 l~rad~vi~~~~~~~~ 198 (338) +..||++++||.+... T Consensus 191 ~e~aDi~VvNKaD~~~ 206 (327) T d2p67a1 191 MEVADLIVINKDDGDN 206 (327) T ss_dssp HHHCSEEEECCCCTTC T ss_pred HCCCCEEEEEEECCCC T ss_conf 2015579998622554 No 23 >d1yrba1 c.37.1.10 (A:1-244) ATP(GTP)-binding protein PAB0955 {Pyrococcus abyssi [TaxId: 29292]} Probab=90.09 E-value=0.054 Score=31.56 Aligned_cols=36 Identities=25% Similarity=0.372 Sum_probs=26.7 Q ss_pred EEECCEEECCCCCCHHHHHHHHHHHHCCCCEEEEEECCCC Q ss_conf 9982300078887489999999985247315987604578 Q gi|254780401|r 47 ICVGGFVMGGTGKTPTALAIAKAVIDKNLKPGFLSRGYGR 86 (338) Q Consensus 47 I~VGNitvGGtGKTP~v~~l~~~l~~~g~~~~ilsRGYg~ 86 (338) +.+|-+ |+|||-++..|.+++. .+.++++|.-.-+. T Consensus 4 ~v~G~~---GsGKTTLl~~ll~~~~-~~~~~~ivn~d~~~ 39 (244) T d1yrba1 4 VFVGTA---GSGKTTLTGEFGRYLE-DNYKVAYVNLDTGV 39 (244) T ss_dssp EEECST---TSSHHHHHHHHHHHHT-TTSCEEEEECCSSC T ss_pred EEECCC---CCCHHHHHHHHHHHHH-HCCEEEEEECCCCC T ss_conf 999189---9839999999999884-38768999667664 No 24 >d1gkub1 c.37.1.16 (B:1-250) Helicase-like "domain" of reverse gyrase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Probab=88.90 E-value=0.43 Score=25.19 Aligned_cols=95 Identities=16% Similarity=0.113 Sum_probs=49.1 Q ss_pred ECCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCEEEECCCCCHHHHCCHHHHHHHCCC--C--C----CCC-CHH Q ss_conf 078887489999999985247315987604578777755871456788770421233220576--3--4----652-012 Q gi|254780401|r 54 MGGTGKTPTALAIAKAVIDKNLKPGFLSRGYGRKSRISFRVDLEKHSAYDVGDEPLLLARRAV--T--I----VTS-DRK 124 (338) Q Consensus 54 vGGtGKTP~v~~l~~~l~~~g~~~~ilsRGYg~~~~~~~~v~~~~~~~~~vGDEp~lla~~~p--v--~----V~~-~R~ 124 (338) -=|+|||=+.+..+..+..+|.++.++. +...-+.+.-++---+.+... + . .+. .+. T Consensus 66 pTGsGKT~~~~~~~~~~~~~~~rvliv~--------------Pt~~La~Q~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 131 (237) T d1gkub1 66 PTGVGKTSFGLAMSLFLALKGKRCYVIF--------------PTSLLVIQAAETIRKYAEKAGVGTENLIGYYHGRIPKR 131 (237) T ss_dssp CBTSCSHHHHHHHHHHHHTTSCCEEEEE--------------SCHHHHHHHHHHHHHHHTTTCCSGGGSEEECCSSCCSH T ss_pred CCCCHHHHHHHHHHHHHHHHCCEEEEEE--------------CCHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCHH T ss_conf 6897699999999999987458389994--------------44999999999999999984994699985542254123 Q ss_pred HHHHHHC-CCCCCEEEECCC--CCCCCCCCEEEEEEECCCC Q ss_conf 2566410-245747997183--2234412306999961843 Q gi|254780401|r 125 IGVQMLL-QEGVDIIIMDDG--FHSADLQADFSLIVVNSHR 162 (338) Q Consensus 125 ~~~~~~~-~~~~diiIlDDG--fQh~~l~rdl~Ivl~d~~~ 162 (338) .....+. ..+++++|.--+ .++....++++.|++|--+ T Consensus 132 ~~~~~l~~~~~~~Ilv~Tp~~l~~~~~~~~~~~~vVvDE~d 172 (237) T d1gkub1 132 EKENFMQNLRNFKIVITTTQFLSKHYRELGHFDFIFVDDVD 172 (237) T ss_dssp HHHHHHHSGGGCSEEEEEHHHHHHCSTTSCCCSEEEESCHH T ss_pred HHHHHHCCCCCCCEECCCHHHHHHHHHHCCCCCEEEEECHH T ss_conf 56555403444423226869999754434778889999926 No 25 >d1gsia_ c.37.1.1 (A:) Thymidylate kinase {Mycobacterium tuberculosis [TaxId: 1773]} Probab=88.78 E-value=0.23 Score=27.07 Aligned_cols=30 Identities=20% Similarity=0.130 Sum_probs=25.7 Q ss_pred ECCEEECCCCCCHHHHHHHHHHHHCCCCEEEEE Q ss_conf 823000788874899999999852473159876 Q gi|254780401|r 49 VGGFVMGGTGKTPTALAIAKAVIDKNLKPGFLS 81 (338) Q Consensus 49 VGNitvGGtGKTP~v~~l~~~l~~~g~~~~ils 81 (338) -||+ |+|||-++..|++.|.++|+++.++. T Consensus 6 eG~d---GsGKST~~~~L~~~l~~~g~~v~~~~ 35 (208) T d1gsia_ 6 EGVD---GAGKRTLVEKLSGAFRAAGRSVATLA 35 (208) T ss_dssp ECST---TSSHHHHHHHHHHHHHHTTCCEEEEE T ss_pred ECCC---CCCHHHHHHHHHHHHHHCCCCEEEEE T ss_conf 8998---78999999999999987899789986 No 26 >d4tmka_ c.37.1.1 (A:) Thymidylate kinase {Escherichia coli [TaxId: 562]} Probab=88.25 E-value=0.21 Score=27.44 Aligned_cols=33 Identities=18% Similarity=0.338 Sum_probs=28.5 Q ss_pred ECCCCCCHHHHHHHHHHHHCCCCEEEEEECCCC Q ss_conf 078887489999999985247315987604578 Q gi|254780401|r 54 MGGTGKTPTALAIAKAVIDKNLKPGFLSRGYGR 86 (338) Q Consensus 54 vGGtGKTP~v~~l~~~l~~~g~~~~ilsRGYg~ 86 (338) .-|+|||-.+..|++.|.+.|++..+++|.-++ T Consensus 10 ~dGsGKsT~~~~L~~~L~~~g~~~~~~~~ep~~ 42 (210) T d4tmka_ 10 LEGAGKTTARNVVVETLEQLGIRDMVFTREPGG 42 (210) T ss_dssp CTTSCHHHHHHHHHHHHHHTTCCCEEEEESSCS T ss_pred CCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCC T ss_conf 988879999999999999679973998329899 No 27 >d2jfga3 c.72.2.1 (A:94-297) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]} Probab=88.12 E-value=0.35 Score=25.85 Aligned_cols=36 Identities=17% Similarity=0.376 Sum_probs=30.2 Q ss_pred CCCCEEEECCEEECCCCCCHHHHHHHHHHHHCCCCEEEEE Q ss_conf 8898899823000788874899999999852473159876 Q gi|254780401|r 42 APIPVICVGGFVMGGTGKTPTALAIAKAVIDKNLKPGFLS 81 (338) Q Consensus 42 ~~~pVI~VGNitvGGtGKTP~v~~l~~~l~~~g~~~~ils 81 (338) .+.|||.| +|=.|||-++.+|+..|++.|+.+++.+ T Consensus 9 ~~~~vI~V----TGT~GKTTt~~~l~~iL~~~g~~~~~~~ 44 (204) T d2jfga3 9 AQAPIVAI----TGSNGKSTVTTLVGEMAKAAGVNVGVGG 44 (204) T ss_dssp CCSCEEEE----ECSSSHHHHHHHHHHHHHHTTCCEEEEE T ss_pred CCCCEEEE----ECCCCHHHHHHHHHHHHHHCCCCCCCCC T ss_conf 89999999----8999799999999999996599822387 No 28 >d1khta_ c.37.1.1 (A:) Adenylate kinase {Archaeon Methanococcus voltae [TaxId: 2188]} Probab=87.79 E-value=0.14 Score=28.67 Aligned_cols=29 Identities=17% Similarity=0.251 Sum_probs=25.8 Q ss_pred CCCCCCHHHHHHHHHHHHCCCCEEEEEEC Q ss_conf 78887489999999985247315987604 Q gi|254780401|r 55 GGTGKTPTALAIAKAVIDKNLKPGFLSRG 83 (338) Q Consensus 55 GGtGKTP~v~~l~~~l~~~g~~~~ilsRG 83 (338) =|+|||.++..|++.|...++++.+++.| T Consensus 10 ~GsGKsT~~~~L~~~l~~~~~~~~~~~~~ 38 (190) T d1khta_ 10 PGVGSTTSSQLAMDNLRKEGVNYKMVSFG 38 (190) T ss_dssp TTSCHHHHHHHHHHHHHTTTCCCEEEEHH T ss_pred CCCCHHHHHHHHHHHHHHCCCCEEEEECC T ss_conf 99898999999999998769986999568 No 29 >d2i3ba1 c.37.1.11 (A:1-189) Cancer-related NTPase, C1orf57 {Human (Homo sapiens) [TaxId: 9606]} Probab=87.14 E-value=0.18 Score=27.90 Aligned_cols=28 Identities=14% Similarity=0.115 Sum_probs=25.0 Q ss_pred CCCCCCHHHHHHHHHHHHCCCCEEEEEE Q ss_conf 7888748999999998524731598760 Q gi|254780401|r 55 GGTGKTPTALAIAKAVIDKNLKPGFLSR 82 (338) Q Consensus 55 GGtGKTP~v~~l~~~l~~~g~~~~ilsR 82 (338) .|||||-++..+++.|++.|.+++++.. T Consensus 10 ~GtGKTtl~~~i~~~l~~~~~~v~~~~~ 37 (189) T d2i3ba1 10 PGVGKTTLIHKASEVLKSSGVPVDGFYT 37 (189) T ss_dssp CSSCHHHHHHHHHHHHHHTTCCCEEEEC T ss_pred CCCCHHHHHHHHHHHHHHCCCEEEEEEE T ss_conf 9971999999999999977997999984 No 30 >d1nksa_ c.37.1.1 (A:) Adenylate kinase {Archaeon Sulfolobus acidocaldarius [TaxId: 2285]} Probab=84.29 E-value=0.3 Score=26.30 Aligned_cols=28 Identities=14% Similarity=0.376 Sum_probs=25.3 Q ss_pred CCCCCHHHHHHHHHHHHCCCCEEEEEEC Q ss_conf 8887489999999985247315987604 Q gi|254780401|r 56 GTGKTPTALAIAKAVIDKNLKPGFLSRG 83 (338) Q Consensus 56 GtGKTP~v~~l~~~l~~~g~~~~ilsRG 83 (338) |+|||..+..|++.|..+|+.+-.++-| T Consensus 11 GsGKTT~~~~La~~L~~~~~~~~~~~~~ 38 (194) T d1nksa_ 11 GVGKSTVLAKVKEILDNQGINNKIINYG 38 (194) T ss_dssp TSCHHHHHHHHHHHHHTTTCCEEEEEHH T ss_pred CCCHHHHHHHHHHHHHHCCCCEEEEECC T ss_conf 9898999999999998769988999789 No 31 >d1bifa1 c.37.1.7 (A:37-249) 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase, kinase domain {Rat (Rattus norvegicus) [TaxId: 10116]} Probab=83.34 E-value=0.35 Score=25.81 Aligned_cols=35 Identities=17% Similarity=0.236 Sum_probs=29.5 Q ss_pred EEEECCEEECCCCCCHHHHHHHHHHHHCCCCEEEEEEC Q ss_conf 89982300078887489999999985247315987604 Q gi|254780401|r 46 VICVGGFVMGGTGKTPTALAIAKAVIDKNLKPGFLSRG 83 (338) Q Consensus 46 VI~VGNitvGGtGKTP~v~~l~~~l~~~g~~~~ilsRG 83 (338) |+.|| .-|+|||-++-.|++.+...|+++.++++. T Consensus 5 i~l~G---lpgsGKSTla~~L~~~l~~~~~~~~~~~~D 39 (213) T d1bifa1 5 IVMVG---LPARGKTYISKKLTRYLNFIGVPTREFNVG 39 (213) T ss_dssp EEEEC---CTTSSHHHHHHHHHHHHHHTTCCEEEEEHH T ss_pred EEEEC---CCCCCHHHHHHHHHHHHHHCCCCCEEECCC T ss_conf 99989---999999999999999997469997397453 No 32 >d1nn5a_ c.37.1.1 (A:) Thymidylate kinase {Human (Homo sapiens) [TaxId: 9606]} Probab=83.30 E-value=0.43 Score=25.19 Aligned_cols=30 Identities=17% Similarity=0.206 Sum_probs=25.1 Q ss_pred CCCCCCHHHHHHHHHHHHCCCCEEEEEECCC Q ss_conf 7888748999999998524731598760457 Q gi|254780401|r 55 GGTGKTPTALAIAKAVIDKNLKPGFLSRGYG 85 (338) Q Consensus 55 GGtGKTP~v~~l~~~l~~~g~~~~ilsRGYg 85 (338) -|+|||-.+..|++.|.++|+++..+ |..+ T Consensus 12 dGsGKsT~~~~L~~~L~~~g~~v~~~-~~p~ 41 (209) T d1nn5a_ 12 DRAGKSTQSRKLVEALCAAGHRAELL-RFPE 41 (209) T ss_dssp TTSSHHHHHHHHHHHHHHTTCCEEEE-ESSC T ss_pred CCCCHHHHHHHHHHHHHHCCCCEEEE-ECCC T ss_conf 88899999999999998779968999-6899 No 33 >d1odfa_ c.37.1.6 (A:) Hypothetical protein Ygr205W {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Probab=82.58 E-value=1.5 Score=21.30 Aligned_cols=88 Identities=16% Similarity=0.171 Sum_probs=45.4 Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCEEEECCEEECCCCCCHHHHHHHHHHHHC---CCCEEEEE--ECCCCCCCCCEEEEC Q ss_conf 9999999999997404643388988998230007888748999999998524---73159876--045787777558714 Q gi|254780401|r 22 ISWIYSFISSKLMKRGQRLHAPIPVICVGGFVMGGTGKTPTALAIAKAVIDK---NLKPGFLS--RGYGRKSRISFRVDL 96 (338) Q Consensus 22 ls~iy~~~~~~~~~~~~~~~~~~pVI~VGNitvGGtGKTP~v~~l~~~l~~~---g~~~~ils--RGYg~~~~~~~~v~~ 96 (338) ++++.-++....-.+.+. .-+.| +.||=-=.=|+|||-++.+|.+.|.++ +..++++| =-|..... T Consensus 5 ~~~~~~~~~~~~~~~~~~-~~~~P-~iIGi~G~qGSGKSTl~~~l~~~L~~~~~~~~~v~~iS~DdfY~t~~~------- 75 (286) T d1odfa_ 5 LDYTIEFLDKYIPEWFET-GNKCP-LFIFFSGPQGSGKSFTSIQIYNHLMEKYGGEKSIGYASIDDFYLTHED------- 75 (286) T ss_dssp HHHHHHHHHHHHHHHHTT-TCCSC-EEEEEECCTTSSHHHHHHHHHHHHHHHHGGGSCEEEEEGGGGBCCHHH------- T ss_pred HHHHHHHHHHHHHHHHHC-CCCCC-EEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCHHH------- T ss_conf 577999999999999704-89998-899837998788999999999999987277860676356777788899------- Q ss_pred CCCCHHHHCCHHHHHHHCCCCC Q ss_conf 5678877042123322057634 Q gi|254780401|r 97 EKHSAYDVGDEPLLLARRAVTI 118 (338) Q Consensus 97 ~~~~~~~vGDEp~lla~~~pv~ 118 (338) ...-+....+.|++.-+-.|-- T Consensus 76 r~~L~~~~~~~pl~~~RG~PgT 97 (286) T d1odfa_ 76 QLKLNEQFKNNKLLQGRGLPGT 97 (286) T ss_dssp HHHHHHHTTTCGGGSSSCSTTS T ss_pred HHHHHHHCCCCCCCEECCCCCC T ss_conf 9998521355531100478740 No 34 >d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis glycosyltransferase MurG {Escherichia coli [TaxId: 562]} Probab=79.66 E-value=0.72 Score=23.58 Aligned_cols=33 Identities=24% Similarity=0.412 Sum_probs=26.6 Q ss_pred EECCC-CCCHHHHHHHHHHHHCCCCEEEEEECCC Q ss_conf 00788-8748999999998524731598760457 Q gi|254780401|r 53 VMGGT-GKTPTALAIAKAVIDKNLKPGFLSRGYG 85 (338) Q Consensus 53 tvGGt-GKTP~v~~l~~~l~~~g~~~~ilsRGYg 85 (338) ++||| |-.--++.|++.|+++|+.|.+++.++| T Consensus 6 ~~~GtGGHv~~a~al~~~L~~~G~eV~~i~~~~~ 39 (351) T d1f0ka_ 6 MAGGTGGHVFPGLAVAHHLMAQGWQVRWLGTADR 39 (351) T ss_dssp ECCSSHHHHHHHHHHHHHHHTTTCEEEEEECTTS T ss_pred ECCCCHHHHHHHHHHHHHHHHCCCEEEEEEECCC T ss_conf 8388589899999999999858998999995883 No 35 >d1nlfa_ c.37.1.11 (A:) Hexameric replicative helicase repA {Escherichia coli [TaxId: 562]} Probab=77.44 E-value=2.2 Score=20.17 Aligned_cols=48 Identities=19% Similarity=0.142 Sum_probs=26.9 Q ss_pred CCEEE----CCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCEEEECCCCCHH Q ss_conf 23000----788874899999999852473159876045787777558714567887 Q gi|254780401|r 50 GGFVM----GGTGKTPTALAIAKAVIDKNLKPGFLSRGYGRKSRISFRVDLEKHSAY 102 (338) Q Consensus 50 GNitv----GGtGKTP~v~~l~~~l~~~g~~~~ilsRGYg~~~~~~~~v~~~~~~~~ 102 (338) |++++ +|+|||-+++.+|-.+.. |... -|+.....+++...+...+.. T Consensus 29 g~~~~i~G~~G~GKS~l~l~la~~ia~-g~~~----~~~~~~~~~~vl~~~~E~~~~ 80 (274) T d1nlfa_ 29 GTVGALVSPGGAGKSMLALQLAAQIAG-GPDL----LEVGELPTGPVIYLPAEDPPT 80 (274) T ss_dssp TSEEEEEESTTSSHHHHHHHHHHHHHT-CCCT----TCCCCCCCCCEEEEESSSCHH T ss_pred CCEEEEEECCCCCHHHHHHHHHHHHHC-CCCC----CCCCCCCCCCEEEEECCCHHH T ss_conf 958999928999899999999999976-9972----111235787368985123499 No 36 >d1rz3a_ c.37.1.6 (A:) Hypothetical protein rbstp0775 {Bacillus stearothermophilus [TaxId: 1422]} Probab=75.90 E-value=1 Score=22.48 Aligned_cols=41 Identities=12% Similarity=0.261 Sum_probs=30.5 Q ss_pred CCCCCE-EEECCEEECCCCCCHHHHHHHHHHHHCCCCEEEEEEC Q ss_conf 388988-9982300078887489999999985247315987604 Q gi|254780401|r 41 HAPIPV-ICVGGFVMGGTGKTPTALAIAKAVIDKNLKPGFLSRG 83 (338) Q Consensus 41 ~~~~pV-I~VGNitvGGtGKTP~v~~l~~~l~~~g~~~~ilsRG 83 (338) +..-|+ |.|+- ..|+|||-++-.|++.|...+..+.+++.- T Consensus 18 ~~~~~~iIgI~G--~~GSGKSTla~~L~~~l~~~~~~~~~~~~~ 59 (198) T d1rz3a_ 18 KTAGRLVLGIDG--LSRSGKTTLANQLSQTLREQGISVCVFHMD 59 (198) T ss_dssp CCSSSEEEEEEE--CTTSSHHHHHHHHHHHHHHTTCCEEEEEGG T ss_pred CCCCCEEEEEEC--CCCCCHHHHHHHHHHHHCCCCCCCEECCCC T ss_conf 679988999789--887899999999999836346652001220 No 37 >g1qhh.1 c.37.1.19 (A:,B:,C:,D:) DEXX box DNA helicase {Bacillus stearothermophilus, PcrA [TaxId: 1422]} Probab=75.53 E-value=1.4 Score=21.46 Aligned_cols=39 Identities=18% Similarity=0.313 Sum_probs=25.3 Q ss_pred CCCEEEECCEEECCCCCCHHHHHHHHHHH-HCC---CCEEEEEECCCC Q ss_conf 89889982300078887489999999985-247---315987604578 Q gi|254780401|r 43 PIPVICVGGFVMGGTGKTPTALAIAKAVI-DKN---LKPGFLSRGYGR 86 (338) Q Consensus 43 ~~pVI~VGNitvGGtGKTP~v~~l~~~l~-~~g---~~~~ilsRGYg~ 86 (338) .-|++.+|- =|||||-+.+.-+.+|. +.+ -++.+|| |.+ T Consensus 24 ~~~~lV~A~---AGSGKT~~lv~ri~~ll~~~~~~p~~Il~lt--ft~ 66 (623) T g1qhh.1 24 EGPLLIMAG---AGSGKTRVLTHRIAYLMAEKHVAPWNILAIT--FTN 66 (623) T ss_dssp SSCEEEEEC---TTSCHHHHHHHHHHHHHHTTCCCGGGEEEEE--SSH T ss_pred CCCEEEEEE---CCHHHHHHHHHHHHHHHHCCCCCCCCEEEEE--CCH T ss_conf 999899981---8658999999999999980998933099994--419 No 38 >d1osna_ c.37.1.1 (A:) Thymidine kinase {Varicella-zoster virus [TaxId: 10335]} Probab=75.08 E-value=1.4 Score=21.50 Aligned_cols=33 Identities=18% Similarity=0.214 Sum_probs=26.9 Q ss_pred EEEECCEEECCCCCCHHHHHHHHHHHHCCCCEEEEE Q ss_conf 899823000788874899999999852473159876 Q gi|254780401|r 46 VICVGGFVMGGTGKTPTALAIAKAVIDKNLKPGFLS 81 (338) Q Consensus 46 VI~VGNitvGGtGKTP~v~~l~~~l~~~g~~~~ils 81 (338) |..=||+ |+|||-++..|++.|..+|.++.++- T Consensus 8 I~IEG~i---GsGKSTl~~~L~~~l~~~g~~v~~~~ 40 (331) T d1osna_ 8 IYLDGAY---GIGKTTAAEEFLHHFAITPNRILLIG 40 (331) T ss_dssp EEEEESS---SSCTTHHHHHHHHTTTTSGGGEEEEC T ss_pred EEEECCC---CCCHHHHHHHHHHHHHHCCCCEEEEE T ss_conf 9998887---78899999999998734688569971 No 39 >d1sq5a_ c.37.1.6 (A:) Pantothenate kinase PanK {Escherichia coli [TaxId: 562]} Probab=74.97 E-value=2.5 Score=19.73 Aligned_cols=45 Identities=16% Similarity=0.162 Sum_probs=30.4 Q ss_pred CCCCCCCEEEECCEEECCCCCCHHHHHHHHHHHHC--CCCEEEEEE-CC Q ss_conf 43388988998230007888748999999998524--731598760-45 Q gi|254780401|r 39 RLHAPIPVICVGGFVMGGTGKTPTALAIAKAVIDK--NLKPGFLSR-GY 84 (338) Q Consensus 39 ~~~~~~pVI~VGNitvGGtGKTP~v~~l~~~l~~~--g~~~~ilsR-GY 84 (338) ....+.| +.||=-=.-|+|||-++..|...|.+. +.++.++|= || T Consensus 74 ~~~~k~P-~iIGIaG~sgSGKSTla~~L~~lL~~~~~~~~v~~Is~D~F 121 (308) T d1sq5a_ 74 TNGQRIP-YIISIAGSVAVGKSTTARVLQALLSRWPEHRRVELITTDGF 121 (308) T ss_dssp CC-CCCC-EEEEEEECTTSSHHHHHHHHHHHHTTSTTCCCEEEEEGGGG T ss_pred CCCCCCC-EEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEEEE T ss_conf 4478998-89999689999876899999999730468996599952156 No 40 >d1p3da3 c.72.2.1 (A:107-321) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]} Probab=74.94 E-value=0.99 Score=22.60 Aligned_cols=36 Identities=33% Similarity=0.468 Sum_probs=29.1 Q ss_pred CEEEECCEEECCCCCCHHHHHHHHHHHHCCCCEEEEEECC Q ss_conf 8899823000788874899999999852473159876045 Q gi|254780401|r 45 PVICVGGFVMGGTGKTPTALAIAKAVIDKNLKPGFLSRGY 84 (338) Q Consensus 45 pVI~VGNitvGGtGKTP~v~~l~~~l~~~g~~~~ilsRGY 84 (338) +||+ .+|=.|||-++.+|+..|++.|++++...-++ T Consensus 13 ~~I~----ITGTnGKTTt~~~l~~iL~~~~~~~~~~~g~~ 48 (215) T d1p3da3 13 HGIA----VAGTHGKTTTTAMISMIYTQAKLDPTFVNGGL 48 (215) T ss_dssp EEEE----EESSSCHHHHHHHHHHHHHHTTCCCEEEEEEE T ss_pred CEEE----EECCCCHHHHHHHHHHHHHHCCCCCEEEECCE T ss_conf 7899----98999889999999999986799965854863 No 41 >d1gg4a4 c.72.2.1 (A:99-312) UDP-murNac-tripeptide D-alanyl-D-alanine-adding enzyme MurF {Escherichia coli [TaxId: 562]} Probab=74.25 E-value=1 Score=22.48 Aligned_cols=33 Identities=21% Similarity=0.195 Sum_probs=26.5 Q ss_pred CCCEEEECCEEECCCCCCHHHHHHHHHHHHCCCCEEE Q ss_conf 8988998230007888748999999998524731598 Q gi|254780401|r 43 PIPVICVGGFVMGGTGKTPTALAIAKAVIDKNLKPGF 79 (338) Q Consensus 43 ~~pVI~VGNitvGGtGKTP~v~~l~~~l~~~g~~~~i 79 (338) |..||+| +|=-|||-++-+|+..|++.|++++. T Consensus 1 p~kvI~V----TGTnGKTTt~~mi~~iL~~~g~~~~~ 33 (214) T d1gg4a4 1 PARVVAL----TGSSGKTSVKEMTAAILSQCGNTLYT 33 (214) T ss_dssp CCEEEEE----ECSSCHHHHHHHHHHHHTTTSCEEEC T ss_pred CCCEEEE----ECCCCHHHHHHHHHHHHHHCCCCEEE T ss_conf 9999999----68986999999999999817998999 No 42 >d1j6ua3 c.72.2.1 (A:89-295) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]} Probab=73.68 E-value=2.2 Score=20.19 Aligned_cols=38 Identities=24% Similarity=0.284 Sum_probs=30.5 Q ss_pred CCCEEEECCEEECCCCCCHHHHHHHHHHHHCCCCEEEEEECC Q ss_conf 898899823000788874899999999852473159876045 Q gi|254780401|r 43 PIPVICVGGFVMGGTGKTPTALAIAKAVIDKNLKPGFLSRGY 84 (338) Q Consensus 43 ~~pVI~VGNitvGGtGKTP~v~~l~~~l~~~g~~~~ilsRGY 84 (338) +..+|.| +|=-|||-++.+|+..|++.|++|+...-|. T Consensus 13 ~~~~iAI----TGTnGKTTt~~~l~~iL~~~g~~~~~~~g~~ 50 (207) T d1j6ua3 13 KKEEFAV----TGTDGKTTTTAMVAHVLKHLRKSPTVFLGGI 50 (207) T ss_dssp CCCEEEE----ECSSSHHHHHHHHHHHHHHTTCCCEEECSSC T ss_pred CCCEEEE----ECCCCHHHHHHHHHHHHHHCCCCCEEEECCC T ss_conf 9988999----8898899999999999985899976997876 No 43 >d1e8ca3 c.72.2.1 (A:104-337) UDP-N-acetylmuramyl tripeptide synthetase MurE {Escherichia coli [TaxId: 562]} Probab=73.68 E-value=1.5 Score=21.30 Aligned_cols=34 Identities=21% Similarity=0.199 Sum_probs=29.2 Q ss_pred CCEEEECCEEECCCCCCHHHHHHHHHHHHCCCCEEEEE Q ss_conf 98899823000788874899999999852473159876 Q gi|254780401|r 44 IPVICVGGFVMGGTGKTPTALAIAKAVIDKNLKPGFLS 81 (338) Q Consensus 44 ~pVI~VGNitvGGtGKTP~v~~l~~~l~~~g~~~~ils 81 (338) .+||+| +|=-|||-++.+|+..|++.|++++.++ T Consensus 5 ~~vI~I----TGT~GKTTt~~~l~~iL~~~g~~~~~~g 38 (234) T d1e8ca3 5 LRLVGV----TGTNGKTTTTQLLAQWSQLLGEISAVMG 38 (234) T ss_dssp SEEEEE----ESSSCHHHHHHHHHHHHHHTTCCEEEEE T ss_pred CEEEEE----ECCCCHHHHHHHHHHHHHHCCCCEEEEC T ss_conf 829999----8999399999999999997799869977 No 44 >d1cr2a_ c.37.1.11 (A:) Gene 4 protein (g4p, DNA primase), helicase domain {Bacteriophage T7 [TaxId: 10760]} Probab=73.07 E-value=1.3 Score=21.66 Aligned_cols=32 Identities=25% Similarity=0.268 Sum_probs=25.2 Q ss_pred CCEEE----CCCCCCHHHHHHHHHH-HHCCCCEEEEE Q ss_conf 23000----7888748999999998-52473159876 Q gi|254780401|r 50 GGFVM----GGTGKTPTALAIAKAV-IDKNLKPGFLS 81 (338) Q Consensus 50 GNitv----GGtGKTP~v~~l~~~l-~~~g~~~~ils 81 (338) |.+++ -|+|||-++..++-.+ ...|.+|+++| T Consensus 35 G~l~vi~G~~G~GKT~~~~~la~~~a~~~g~~v~~~s 71 (277) T d1cr2a_ 35 GEVIMVTSGSGMGKSTFVRQQALQWGTAMGKKVGLAM 71 (277) T ss_dssp TCEEEEECSTTSSHHHHHHHHHHHHHHTSCCCEEEEE T ss_pred CEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCEEEEE T ss_conf 8089999479997999999999726553366345764 No 45 >d1fnna2 c.37.1.20 (A:1-276) CDC6, N-domain {Archaeon Pyrobaculum aerophilum [TaxId: 13773]} Probab=72.15 E-value=1.9 Score=20.53 Aligned_cols=35 Identities=26% Similarity=0.111 Sum_probs=24.6 Q ss_pred CCCCEEEECCEEECCCCCCHHHHHHHHHHHHCCCCEEE Q ss_conf 88988998230007888748999999998524731598 Q gi|254780401|r 42 APIPVICVGGFVMGGTGKTPTALAIAKAVIDKNLKPGF 79 (338) Q Consensus 42 ~~~pVI~VGNitvGGtGKTP~v~~l~~~l~~~g~~~~i 79 (338) .+-.++-.|- -|||||-++.++++.+.+.+.-..+ T Consensus 42 ~~~~lll~Gp---pGtGKT~l~~~l~~~l~~~~~~~~~ 76 (276) T d1fnna2 42 HYPRATLLGR---PGTGKTVTLRKLWELYKDKTTARFV 76 (276) T ss_dssp SCCEEEEECC---TTSSHHHHHHHHHHHHTTSCCCEEE T ss_pred CCCCEEEECC---CCCCHHHHHHHHHHHHHCCCCCCEE T ss_conf 8881688898---9998999999999997544688578 No 46 >d1hjsa_ c.1.8.3 (A:) Beta-1,4-galactanase {Thielavia heterothallica, aka Myceliophthora thermophila [TaxId: 78579]} Probab=71.55 E-value=2.8 Score=19.38 Aligned_cols=44 Identities=5% Similarity=-0.196 Sum_probs=24.6 Q ss_pred CCCCCCCCCCCCCCC-CHHHHH-HHHHHHHHCCCEEEECHHHHHHC Q ss_conf 000012214332348-989999-99997564798799854663438 Q gi|254780401|r 246 ALIEQCYSFGDHAHL-SDKKIA-YLLDQAQQKGLILVTTAKDAMRL 289 (338) Q Consensus 246 ~~i~~~~~fpDHh~y-s~~dl~-~i~~~a~~~~~~iiTTEKD~VKL 289 (338) +.++..+.||.-+.. +...+. .+.+.+...+..+..||.++..- T Consensus 206 ~D~ig~~~Y~~~~~~~~~~~~~~~~~~~~~~~g~~v~i~E~~~~~~ 251 (332) T d1hjsa_ 206 FDMMGVSFYPFYSSSATLSALKSSLDNMAKTWNKEIAVVETNWPIS 251 (332) T ss_dssp CCEEEEECCSSSCTTCCHHHHHHHHHHHHHHHCCEEEEEECCCCSB T ss_pred CCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCC T ss_conf 2357443168788777777899999999998388559998424446 No 47 >d1qvra3 c.37.1.20 (A:536-850) ClpB, AAA+ modules {Thermus thermophilus [TaxId: 274]} Probab=71.48 E-value=2.6 Score=19.66 Aligned_cols=22 Identities=32% Similarity=0.419 Sum_probs=17.1 Q ss_pred CCCCCCHHHHHHHHHHHHCCCC Q ss_conf 7888748999999998524731 Q gi|254780401|r 55 GGTGKTPTALAIAKAVIDKNLK 76 (338) Q Consensus 55 GGtGKTP~v~~l~~~l~~~g~~ 76 (338) -|+|||=++..||+.|-..+.+ T Consensus 62 ~G~GKt~lak~la~~l~~~~~~ 83 (315) T d1qvra3 62 TGVGKTELAKTLAATLFDTEEA 83 (315) T ss_dssp SSSSHHHHHHHHHHHHHSSGGG T ss_pred CCCHHHHHHHHHHHHHCCCCCC T ss_conf 8624899999999983588753 No 48 >d1l8qa2 c.37.1.20 (A:77-289) Chromosomal replication initiation factor DnaA {Aquifex aeolicus [TaxId: 63363]} Probab=71.06 E-value=1.6 Score=21.12 Aligned_cols=35 Identities=26% Similarity=0.313 Sum_probs=28.7 Q ss_pred CCEEEECCEEECCCCCCHHHHHHHHHHHHCCCCEEEEE Q ss_conf 98899823000788874899999999852473159876 Q gi|254780401|r 44 IPVICVGGFVMGGTGKTPTALAIAKAVIDKNLKPGFLS 81 (338) Q Consensus 44 ~pVI~VGNitvGGtGKTP~v~~l~~~l~~~g~~~~ils 81 (338) -|++-.|. -|||||=+..++++.+.++++.+..++ T Consensus 37 n~l~l~G~---~G~GKTHLl~A~~~~~~~~~~~~~~~~ 71 (213) T d1l8qa2 37 NPIFIYGS---VGTGKTHLLQAAGNEAKKRGYRVIYSS 71 (213) T ss_dssp SSEEEECS---SSSSHHHHHHHHHHHHHHTTCCEEEEE T ss_pred CCEEEECC---CCCCHHHHHHHHHHHHCCCCCCEEEEC T ss_conf 85799888---998399999999987446765048844 No 49 >d1z63a1 c.37.1.19 (A:432-661) Helicase of the SNF2/Rad54 hamily {Sulfolobus solfataricus [TaxId: 2287]} Probab=70.71 E-value=3.1 Score=19.05 Aligned_cols=20 Identities=30% Similarity=0.363 Sum_probs=17.1 Q ss_pred CCCCCCHHHHHHHHHHHHCC Q ss_conf 78887489999999985247 Q gi|254780401|r 55 GGTGKTPTALAIAKAVIDKN 74 (338) Q Consensus 55 GGtGKTP~v~~l~~~l~~~g 74 (338) =|+|||=.+++++..+.+.+ T Consensus 40 ~GlGKT~~~i~~~~~~~~~~ 59 (230) T d1z63a1 40 MGLGKTLQTIAVFSDAKKEN 59 (230) T ss_dssp TTSCHHHHHHHHHHHHHHTT T ss_pred CCCCHHHHHHHHHHHHHHCC T ss_conf 99886999987355442123 No 50 >d2piaa2 c.25.1.2 (A:104-223) Phthalate dioxygenase reductase {Pseudomonas cepacia, db01 [TaxId: 292]} Probab=70.62 E-value=1.1 Score=22.25 Aligned_cols=39 Identities=26% Similarity=0.302 Sum_probs=23.2 Q ss_pred CCEEEECCEEECCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCC Q ss_conf 9889982300078887489999999985247315987604578777 Q gi|254780401|r 44 IPVICVGGFVMGGTGKTPTALAIAKAVIDKNLKPGFLSRGYGRKSR 89 (338) Q Consensus 44 ~pVI~VGNitvGGtGKTP~v~~l~~~l~~~g~~~~ilsRGYg~~~~ 89 (338) -|++ +..||||=||+...+-....+ +.+...+- |+.++. T Consensus 9 ~~~v----~IagGtGiaP~~s~~~~l~~~-~~~~~~l~--~~~r~~ 47 (120) T d2piaa2 9 KSFI----LVAGGIGITPMLSMARQLRAE-GLRSFRLY--YLTRDP 47 (120) T ss_dssp SEEE----EEEEGGGHHHHHHHHHHHHHH-CSSEEEEE--EEESCG T ss_pred CCEE----EEEECCCHHHHHHHHHHHHHH-CCCCEEEE--EEECCH T ss_conf 8789----998360678899999999984-69984999--961778 No 51 >d1g5ta_ c.37.1.11 (A:) ATP:corrinoid adenosyltransferase CobA {Salmonella typhimurium [TaxId: 90371]} Probab=69.78 E-value=3.3 Score=18.92 Aligned_cols=33 Identities=21% Similarity=0.259 Sum_probs=25.4 Q ss_pred EECCCCCCHHHHHHHHHHHHCCCCEEEEEECCCC Q ss_conf 0078887489999999985247315987604578 Q gi|254780401|r 53 VMGGTGKTPTALAIAKAVIDKNLKPGFLSRGYGR 86 (338) Q Consensus 53 tvGGtGKTP~v~~l~~~l~~~g~~~~ilsRGYg~ 86 (338) |=-|-|||..++=+|=.-.-+|++|.++ +.-++ T Consensus 9 tG~GKGKTTAAlG~alRA~G~G~rV~iv-QFlKg 41 (157) T d1g5ta_ 9 TGNGKGKTTAAFGTAARAVGHGKNVGVV-QFIKG 41 (157) T ss_dssp ESSSSCHHHHHHHHHHHHHHTTCCEEEE-ESSCC T ss_pred ECCCCCCHHHHHHHHHHHHCCCCEEEEE-EEECC T ss_conf 5799970899999999984189879999-98527 No 52 >d1ep3b2 c.25.1.3 (B:103-262) Dihydroorotate dehydrogenase B, PyrK subunit {Lactococcus lactis, isozyme B [TaxId: 1358]} Probab=69.44 E-value=1.2 Score=21.93 Aligned_cols=28 Identities=21% Similarity=0.265 Sum_probs=20.7 Q ss_pred EEECCCCCCHHHHHHHHHHHHCCCCEEEE Q ss_conf 00078887489999999985247315987 Q gi|254780401|r 52 FVMGGTGKTPTALAIAKAVIDKNLKPGFL 80 (338) Q Consensus 52 itvGGtGKTP~v~~l~~~l~~~g~~~~il 80 (338) +..||+|=||+...+ +.|.+.+.++-++ T Consensus 13 lIAgG~GitPl~sm~-~~l~~~~~~v~l~ 40 (160) T d1ep3b2 13 IIGGGIGVPPLYELA-KQLEKTGCQMTIL 40 (160) T ss_dssp EEEEGGGSHHHHHHH-HHHHHHTCEEEEE T ss_pred EEEEEEEHHHHHHHH-HHHHHCCCCEEEE T ss_conf 997104499999999-9998645855899 No 53 >d1tf7a2 c.37.1.11 (A:256-497) Circadian clock protein KaiC {Synechococcus sp. strain PCC 7942 (Anacystis nidulans R2) [TaxId: 1140]} Probab=68.86 E-value=1.9 Score=20.62 Aligned_cols=27 Identities=19% Similarity=0.214 Sum_probs=24.6 Q ss_pred CCCCCCHHHHHHHHHHHHCCCCEEEEE Q ss_conf 788874899999999852473159876 Q gi|254780401|r 55 GGTGKTPTALAIAKAVIDKNLKPGFLS 81 (338) Q Consensus 55 GGtGKTP~v~~l~~~l~~~g~~~~ils 81 (338) -|+|||-++..++....+.|.++..+| T Consensus 35 pGsGKT~l~~qia~~~~~~~~~~~~is 61 (242) T d1tf7a2 35 TGTGKTLLVSRFVENACANKERAILFA 61 (242) T ss_dssp TTSSHHHHHHHHHHHHHTTTCCEEEEE T ss_pred CCCCHHHHHHHHHHHHHHHCCCCCEEE T ss_conf 999999999999999987232441121 No 54 >d2i3da1 c.69.1.36 (A:2-219) Hypothetical protein Atu1826 {Agrobacterium tumefaciens [TaxId: 358]} Probab=68.84 E-value=3.1 Score=19.12 Aligned_cols=47 Identities=21% Similarity=0.233 Sum_probs=40.2 Q ss_pred CCCCEEEECCEEECCCCCCHHHHHHHHHHHHCCCCEEEE-EECCCCCC Q ss_conf 889889982300078887489999999985247315987-60457877 Q gi|254780401|r 42 APIPVICVGGFVMGGTGKTPTALAIAKAVIDKNLKPGFL-SRGYGRKS 88 (338) Q Consensus 42 ~~~pVI~VGNitvGGtGKTP~v~~l~~~l~~~g~~~~il-sRGYg~~~ 88 (338) .++-|+|=||=..||+-.-+++..+++.|.++|+.+... .||+|+.. T Consensus 24 ~~~~l~~Hp~p~~GG~~~~~~~~~~a~~l~~~G~~~lrfn~RG~g~S~ 71 (218) T d2i3da1 24 APIAIILHPHPQFGGTMNNQIVYQLFYLFQKRGFTTLRFNFRSIGRSQ 71 (218) T ss_dssp CCEEEEECCCGGGTCCTTSHHHHHHHHHHHHTTCEEEEECCTTSTTCC T ss_pred CCEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCEEEEEEECCCCCCCC T ss_conf 878999799867689677479999999987369059997157667876 No 55 >d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]} Probab=68.68 E-value=2.2 Score=20.15 Aligned_cols=33 Identities=27% Similarity=0.314 Sum_probs=26.3 Q ss_pred EEECCCCCCHHHHHHHHHHHHCCCCEEEEEECCCC Q ss_conf 00078887489999999985247315987604578 Q gi|254780401|r 52 FVMGGTGKTPTALAIAKAVIDKNLKPGFLSRGYGR 86 (338) Q Consensus 52 itvGGtGKTP~v~~l~~~l~~~g~~~~ilsRGYg~ 86 (338) +.+||||.. =..+++.|.+.|++|.+++|.-.. T Consensus 7 LVtGatG~i--G~~l~~~L~~~G~~V~~l~R~~~~ 39 (307) T d1qyca_ 7 LLIGATGYI--GRHVAKASLDLGHPTFLLVRESTA 39 (307) T ss_dssp EEESTTSTT--HHHHHHHHHHTTCCEEEECCCCCT T ss_pred EEECCCCHH--HHHHHHHHHHCCCEEEEEECCCCC T ss_conf 998998689--999999999788969999888754 No 56 >d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Probab=68.31 E-value=3 Score=19.13 Aligned_cols=29 Identities=24% Similarity=0.236 Sum_probs=25.6 Q ss_pred EECCCCCCHHHHHHHHHHHHCCCCEEEEEEC Q ss_conf 0078887489999999985247315987604 Q gi|254780401|r 53 VMGGTGKTPTALAIAKAVIDKNLKPGFLSRG 83 (338) Q Consensus 53 tvGGtGKTP~v~~l~~~l~~~g~~~~ilsRG 83 (338) .+|||| .+=..||+.|.+.|++|.+.+|- T Consensus 5 vigGaG--~iG~alA~~la~~G~~V~l~~R~ 33 (212) T d1jaya_ 5 LLGGTG--NLGKGLALRLATLGHEIVVGSRR 33 (212) T ss_dssp EETTTS--HHHHHHHHHHHTTTCEEEEEESS T ss_pred EEECCC--HHHHHHHHHHHHCCCEEEEEECC T ss_conf 994883--99999999999879989999799 No 57 >d1uaaa1 c.37.1.19 (A:2-307) DEXX box DNA helicase {Escherichia coli, RepD [TaxId: 562]} Probab=68.02 E-value=1.5 Score=21.36 Aligned_cols=36 Identities=19% Similarity=0.272 Sum_probs=21.8 Q ss_pred CCCEEEECCEEECCCCCCHHHHHHHHHHH-HCC---CCEEEEE Q ss_conf 89889982300078887489999999985-247---3159876 Q gi|254780401|r 43 PIPVICVGGFVMGGTGKTPTALAIAKAVI-DKN---LKPGFLS 81 (338) Q Consensus 43 ~~pVI~VGNitvGGtGKTP~v~~l~~~l~-~~g---~~~~ils 81 (338) +-|.+.+|- -|||||-+.+..+.++. ..+ .++.++| T Consensus 14 ~~~~lI~g~---aGTGKTt~l~~rv~~ll~~~~~~~~~ILvlt 53 (306) T d1uaaa1 14 TGPCLVLAG---AGSGKTRVITNKIAHLIRGCGYQARHIAAVT 53 (306) T ss_dssp SSEEEECCC---TTSCHHHHHHHHHHHHHHHHCCCGGGEEEEE T ss_pred CCCEEEEEE---CCCCHHHHHHHHHHHHHHHCCCCHHHEEEEE T ss_conf 999899962---8843899999999999995699955789996 No 58 >d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]} Probab=67.71 E-value=3.3 Score=18.88 Aligned_cols=31 Identities=19% Similarity=-0.024 Sum_probs=25.4 Q ss_pred EEECCCCCCHHHHHHHHHHHHCCCCEEEEEECC Q ss_conf 000788874899999999852473159876045 Q gi|254780401|r 52 FVMGGTGKTPTALAIAKAVIDKNLKPGFLSRGY 84 (338) Q Consensus 52 itvGGtGKTP~v~~l~~~l~~~g~~~~ilsRGY 84 (338) |++|||| -+-.+|++.|.++|+.|.+++|.= T Consensus 12 LVTG~tG--fIGs~lv~~Ll~~g~~V~~~~r~~ 42 (356) T d1rkxa_ 12 FVTGHTG--FKGGWLSLWLQTMGATVKGYSLTA 42 (356) T ss_dssp EEETTTS--HHHHHHHHHHHHTTCEEEEEESSC T ss_pred EEECCCC--HHHHHHHHHHHHCCCEEEEEECCC T ss_conf 9978887--799999999997799899997899 No 59 >d1y1la_ c.44.1.1 (A:) Arsenate reductase ArsC {Archaeoglobus fulgidus [TaxId: 2234]} Probab=67.34 E-value=3.6 Score=18.59 Aligned_cols=32 Identities=19% Similarity=0.185 Sum_probs=22.8 Q ss_pred CEEEECCEEECCCCCCHHHHHHHHHHHHCCCCEEEEEECC Q ss_conf 8899823000788874899999999852473159876045 Q gi|254780401|r 45 PVICVGGFVMGGTGKTPTALAIAKAVIDKNLKPGFLSRGY 84 (338) Q Consensus 45 pVI~VGNitvGGtGKTP~v~~l~~~l~~~g~~~~ilsRGY 84 (338) -.+|.||. +.+||+..+++.+-. ..-+.|.|- T Consensus 3 lFvC~gN~-----~RS~mAea~~~~~~~---~~~v~SAG~ 34 (124) T d1y1la_ 3 LFVCIHNT-----ARSVMAEALFNAMAK---SWKAESAGV 34 (124) T ss_dssp EEEESSCS-----SHHHHHHHHHHTTCS---SCCEEEEES T ss_pred EEECCCCC-----HHHHHHHHHHHHHCC---CCEEEEECC T ss_conf 99949995-----598999999998254---231345122 No 60 >d1ye8a1 c.37.1.11 (A:1-178) Hypothetical kinase-like protein Aq_1292 {Aquifex aeolicus [TaxId: 63363]} Probab=67.32 E-value=1.8 Score=20.73 Aligned_cols=19 Identities=26% Similarity=0.333 Sum_probs=16.6 Q ss_pred CCCCCCHHHHHHHHHHHHC Q ss_conf 7888748999999998524 Q gi|254780401|r 55 GGTGKTPTALAIAKAVIDK 73 (338) Q Consensus 55 GGtGKTP~v~~l~~~l~~~ 73 (338) -|+|||-+...++..+... T Consensus 9 ~G~GKSTLl~~i~~~l~~~ 27 (178) T d1ye8a1 9 PGVGKTTLVKKIVERLGKR 27 (178) T ss_dssp TTSSHHHHHHHHHHHHGGG T ss_pred CCCHHHHHHHHHHHCCCCC T ss_conf 9938999999998148888 No 61 >d1yksa1 c.37.1.14 (A:185-324) YFV helicase domain {Yellow fever virus [TaxId: 11089]} Probab=67.05 E-value=2.1 Score=20.35 Aligned_cols=27 Identities=30% Similarity=0.374 Sum_probs=20.3 Q ss_pred CCCCCCHHHH-HHHHHHHHCCCCEEEEE Q ss_conf 7888748999-99999852473159876 Q gi|254780401|r 55 GGTGKTPTAL-AIAKAVIDKNLKPGFLS 81 (338) Q Consensus 55 GGtGKTP~v~-~l~~~l~~~g~~~~ils 81 (338) =|+|||-.++ .+.+.+.+.+.++.++. T Consensus 16 tGsGKT~~~~~~~~~~~~~~~~~vli~~ 43 (140) T d1yksa1 16 PGAGKTRRFLPQILAECARRRLRTLVLA 43 (140) T ss_dssp TTSSTTTTHHHHHHHHHHHTTCCEEEEE T ss_pred CCCCHHHHHHHHHHHHHHHCCCEEEEEE T ss_conf 9988559999999997531385156531 No 62 >d1tvca2 c.25.1.2 (A:111-251) Methane monooxygenase component C, MmoC {Methylococcus capsulatus [TaxId: 414]} Probab=66.61 E-value=3.8 Score=18.48 Aligned_cols=30 Identities=23% Similarity=0.242 Sum_probs=21.5 Q ss_pred CCCCCCEEEECCEEECCCCCCHHHHHHHHHHHHC Q ss_conf 3388988998230007888748999999998524 Q gi|254780401|r 40 LHAPIPVICVGGFVMGGTGKTPTALAIAKAVIDK 73 (338) Q Consensus 40 ~~~~~pVI~VGNitvGGtGKTP~v~~l~~~l~~~ 73 (338) .....|++.| .||||=||+.-.|-..+... T Consensus 5 ~~~~~p~vli----agGtGItP~~s~l~~~~~~~ 34 (141) T d1tvca2 5 ERGMAPRYFV----AGGTGLAPVVSMVRQMQEWT 34 (141) T ss_dssp CCSSSCEEEE----EESSTTHHHHHHHHHHHHHT T ss_pred CCCCCCEEEE----ECCHHHHHHHHHHHHHHHCC T ss_conf 7999848999----77440999999999999839 No 63 >d1m8pa3 c.37.1.15 (A:391-573) ATP sulfurylase C-terminal domain {Fungus (Penicillium chrysogenum) [TaxId: 5076]} Probab=65.80 E-value=1.8 Score=20.74 Aligned_cols=28 Identities=18% Similarity=0.099 Sum_probs=21.9 Q ss_pred ECCCCCCHHHHHHHHHHHHCCCCEEEEE Q ss_conf 0788874899999999852473159876 Q gi|254780401|r 54 MGGTGKTPTALAIAKAVIDKNLKPGFLS 81 (338) Q Consensus 54 vGGtGKTP~v~~l~~~l~~~g~~~~ils 81 (338) .=|+|||-+...|++.|...++...... T Consensus 14 ~~GsGKTTia~~La~~L~~~~~~~~~~~ 41 (183) T d1m8pa3 14 YMNSGKDAIARALQVTLNQQGGRSVSLL 41 (183) T ss_dssp STTSSHHHHHHHHHHHHHHHCSSCEEEE T ss_pred CCCCCHHHHHHHHHHHHHHCCCCCHHHH T ss_conf 9999999999999999865079840321 No 64 >d1gvha3 c.25.1.5 (A:254-396) Flavohemoglobin, C-terminal domain {Escherichia coli [TaxId: 562]} Probab=65.39 E-value=3 Score=19.18 Aligned_cols=27 Identities=22% Similarity=0.358 Sum_probs=20.9 Q ss_pred CCCEEEECCEEECCCCCCHHHHHHHHHHHHC Q ss_conf 8988998230007888748999999998524 Q gi|254780401|r 43 PIPVICVGGFVMGGTGKTPTALAIAKAVIDK 73 (338) Q Consensus 43 ~~pVI~VGNitvGGtGKTP~v~~l~~~l~~~ 73 (338) ..|||+| +||||=||+...+-..+... T Consensus 6 d~plv~I----agGtGiaP~~s~l~~l~~~~ 32 (143) T d1gvha3 6 DTPVTLI----SAGVGQTPMLAMLDTLAKAG 32 (143) T ss_dssp TCCEEEE----EEGGGGHHHHHHHHHHHHHT T ss_pred CCCEEEE----ECHHHHHHHHHHHHHHHHCC T ss_conf 9979999----81240999999999999819 No 65 >d1w5sa2 c.37.1.20 (A:7-293) CDC6-like protein APE0152, N-terminal domain {Aeropyrum pernix [TaxId: 56636]} Probab=65.06 E-value=1.4 Score=21.63 Aligned_cols=20 Identities=35% Similarity=0.293 Sum_probs=17.3 Q ss_pred CCCCCCHHHHHHHHHHHHCC Q ss_conf 78887489999999985247 Q gi|254780401|r 55 GGTGKTPTALAIAKAVIDKN 74 (338) Q Consensus 55 GGtGKTP~v~~l~~~l~~~g 74 (338) =|||||-++.++++.|.+.+ T Consensus 55 pGtGKT~l~~~l~~~l~~~~ 74 (287) T d1w5sa2 55 VGIGKTTLAKFTVKRVSEAA 74 (287) T ss_dssp CSSSHHHHHHHHHHHHHHHH T ss_pred CCCCHHHHHHHHHHHHHHHC T ss_conf 99899999999999987541 No 66 >d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]} Probab=64.92 E-value=4 Score=18.29 Aligned_cols=31 Identities=13% Similarity=0.179 Sum_probs=25.3 Q ss_pred EEECCCCCCHHHHHHHHHHHHCCCCEEEEEECC Q ss_conf 000788874899999999852473159876045 Q gi|254780401|r 52 FVMGGTGKTPTALAIAKAVIDKNLKPGFLSRGY 84 (338) Q Consensus 52 itvGGtGKTP~v~~l~~~l~~~g~~~~ilsRGY 84 (338) +++||||- +=..+++.|.++|++|.+++|.= T Consensus 7 lVtGatG~--iG~~lv~~Ll~~G~~V~~l~R~~ 37 (350) T d1xgka_ 7 AVVGATGR--QGASLIRVAAAVGHHVRAQVHSL 37 (350) T ss_dssp EEESTTSH--HHHHHHHHHHHTTCCEEEEESCS T ss_pred EEECCCHH--HHHHHHHHHHHCCCEEEEEECCC T ss_conf 99898728--99999999996889699997784 No 67 >d1wp9a1 c.37.1.19 (A:1-200) putative ATP-dependent RNA helicase PF2015 {Pyrococcus furiosus [TaxId: 2261]} Probab=64.90 E-value=3.6 Score=18.59 Aligned_cols=28 Identities=32% Similarity=0.245 Sum_probs=16.2 Q ss_pred ECCCCCCHHHHHHHHH-HHHCCCCEEEEE Q ss_conf 0788874899999999-852473159876 Q gi|254780401|r 54 MGGTGKTPTALAIAKA-VIDKNLKPGFLS 81 (338) Q Consensus 54 vGGtGKTP~v~~l~~~-l~~~g~~~~ils 81 (338) --|+|||=+...++.. +.+.+.++.+++ T Consensus 31 pTGsGKT~i~~~~~~~~~~~~~~~il~i~ 59 (200) T d1wp9a1 31 PTGLGKTLIAMMIAEYRLTKYGGKVLMLA 59 (200) T ss_dssp CTTSCHHHHHHHHHHHHHHHSCSCEEEEC T ss_pred CCCCCHHHHHHHHHHHHHHHCCCCEEEEC T ss_conf 89972889999999999970698189973 No 68 >d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]} Probab=64.78 E-value=4.1 Score=18.24 Aligned_cols=31 Identities=26% Similarity=0.288 Sum_probs=25.1 Q ss_pred EEECCCCCCHHHHHHHHHHHHCCCCEEEEEECC Q ss_conf 000788874899999999852473159876045 Q gi|254780401|r 52 FVMGGTGKTPTALAIAKAVIDKNLKPGFLSRGY 84 (338) Q Consensus 52 itvGGtGKTP~v~~l~~~l~~~g~~~~ilsRGY 84 (338) |.+||||- +=.+|++.|.++|++|..+.|.- T Consensus 4 LItG~tGf--iG~~l~~~Ll~~g~~V~~~~r~~ 34 (321) T d1rpna_ 4 LVTGITGQ--DGAYLAKLLLEKGYRVHGLVARR 34 (321) T ss_dssp EEETTTSH--HHHHHHHHHHHTTCEEEEEECCC T ss_pred EEECCCCH--HHHHHHHHHHHCCCEEEEEECCC T ss_conf 99788878--99999999997839899998999 No 69 >d1in4a2 c.37.1.20 (A:17-254) Holliday junction helicase RuvB {Thermotoga maritima [TaxId: 2336]} Probab=64.07 E-value=2.4 Score=19.86 Aligned_cols=31 Identities=32% Similarity=0.310 Sum_probs=22.7 Q ss_pred CEEEECCEEECCCCCCHHHHHHHHHHHHCCCCEEEEE Q ss_conf 8899823000788874899999999852473159876 Q gi|254780401|r 45 PVICVGGFVMGGTGKTPTALAIAKAVIDKNLKPGFLS 81 (338) Q Consensus 45 pVI~VGNitvGGtGKTP~v~~l~~~l~~~g~~~~ils 81 (338) .++-.|. =|||||-++..+++.+ +...+++| T Consensus 37 ~~L~~GP---pGtGKT~lA~~la~~~---~~~~~~~~ 67 (238) T d1in4a2 37 HVLLAGP---PGLGKTTLAHIIASEL---QTNIHVTS 67 (238) T ss_dssp CEEEESS---TTSSHHHHHHHHHHHH---TCCEEEEE T ss_pred EEEEECC---CCCCHHHHHHHHHHCC---CCCCCCCC T ss_conf 4898799---9973889999998503---88853325 No 70 >d1krha2 c.25.1.2 (A:206-338) Benzoate dioxygenase reductase {Acinetobacter sp. [TaxId: 472]} Probab=63.47 E-value=2.7 Score=19.54 Aligned_cols=28 Identities=25% Similarity=0.342 Sum_probs=20.5 Q ss_pred CCCCEEEECCEEECCCCCCHHHHHHHHHHHHC Q ss_conf 88988998230007888748999999998524 Q gi|254780401|r 42 APIPVICVGGFVMGGTGKTPTALAIAKAVIDK 73 (338) Q Consensus 42 ~~~pVI~VGNitvGGtGKTP~v~~l~~~l~~~ 73 (338) .+-|+|+| +||||=||+...|-..+... T Consensus 4 ~~rplv~I----AgG~GItP~~s~l~~~~~~~ 31 (133) T d1krha2 4 VKRPVLML----AGGTGIAPFLSMLQVLEQKG 31 (133) T ss_dssp CSSCEEEE----EEGGGHHHHHHHHHHHHHHC T ss_pred CCCCEEEE----ECCHHHHHHHHHHHHHHHCC T ss_conf 89979999----94582999999999999849 No 71 >d2a5yb3 c.37.1.20 (B:109-385) CED-4, NB-ARC domain {Caenorhabditis elegans [TaxId: 6239]} Probab=62.95 E-value=2.2 Score=20.15 Aligned_cols=22 Identities=23% Similarity=0.282 Sum_probs=16.6 Q ss_pred EEEECCEEECCCCCCHHHHHHHHHH Q ss_conf 8998230007888748999999998 Q gi|254780401|r 46 VICVGGFVMGGTGKTPTALAIAKAV 70 (338) Q Consensus 46 VI~VGNitvGGtGKTP~v~~l~~~l 70 (338) |..+| +||.|||-++..+++.. T Consensus 47 v~I~G---mgGiGKTtLA~~v~~~~ 68 (277) T d2a5yb3 47 LFLHG---RAGSGKSVIASQALSKS 68 (277) T ss_dssp EEEEC---STTSSHHHHHHHHHHHC T ss_pred EEEEC---CCCCCHHHHHHHHHHHH T ss_conf 99977---99788899999999855 No 72 >d2nqra3 c.57.1.2 (A:178-326) MoeA, central domain {Escherichia coli [TaxId: 562]} Probab=62.90 E-value=4.4 Score=18.01 Aligned_cols=69 Identities=19% Similarity=0.151 Sum_probs=30.7 Q ss_pred HHHCCHHHHHHHHHHHHCCCCH----HHH-HHHCC-CCHHHH--HHHH---CCCCCCCCCEEEEEECCCCHHHHHHHHHH Q ss_conf 5210025566514544204412----457-76313-501112--2220---13211168638987415535789998874 Q gi|254780401|r 175 LRVPLSRQLSYVDAILYVGNKK----NVI-SSIKN-KSVYFA--KLKP---RLTFDLSGKKVLAFSGIADTEKFFTTVRQ 243 (338) Q Consensus 175 LREp~~~~l~rad~vi~~~~~~----~~~-~~~~~-~~i~~~--~~~~---~~~~~l~~k~v~afsGIa~P~~F~~~L~~ 243 (338) +++-+.++++++|++|+||... +.. +.+.. ..+++. ..+| .....+.++.++.+ =|||-.-+-.+.. T Consensus 56 i~~~l~~~~~~~DivittGG~s~g~~D~~~~~l~~~G~i~~~~v~~~PG~p~~~~~~~~~~v~~L--PGnP~s~~~~~~~ 133 (149) T d2nqra3 56 LRAAFIEADSQADVVISSGGVSVGEADYTKTILEELGEIAFWKLAIKPGKPFAFGKLSNSWFCGL--PGNPVSATLTFYQ 133 (149) T ss_dssp HHHHHHHHHHHCSEEEECSSSCSSSCSHHHHHHHHHSEEEEEEBSEESCCEEEEEECSSSEEEEC--CSSHHHHHHHHHH T ss_pred HHHHHHHCCCCCCEEEECCCCCCCCHHHHHHHHHHCCCEEEECCCCCCCCCCCEEECCCCCEECC--CCCHHHHHHHHHH T ss_conf 99998740345588998078667814889999997598235030200377630110157711748--8876999999999 Q ss_pred HC Q ss_conf 01 Q gi|254780401|r 244 LG 245 (338) Q Consensus 244 ~g 245 (338) +- T Consensus 134 ~v 135 (149) T d2nqra3 134 LV 135 (149) T ss_dssp TH T ss_pred HH T ss_conf 99 No 73 >d1kjna_ c.115.1.1 (A:) Hypothetical protein MTH777 (MT0777) {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]} Probab=62.53 E-value=2.9 Score=19.33 Aligned_cols=23 Identities=13% Similarity=0.239 Sum_probs=21.2 Q ss_pred CCHHHHHHHHHHHHCCCCEEEEE Q ss_conf 74899999999852473159876 Q gi|254780401|r 59 KTPTALAIAKAVIDKNLKPGFLS 81 (338) Q Consensus 59 KTP~v~~l~~~l~~~g~~~~ils 81 (338) .||+++||+..|+++|+.|.|.. T Consensus 16 q~~~~lyl~~~Lk~kG~~v~Va~ 38 (152) T d1kjna_ 16 QIPLAIYTSHKLKKKGFRVTVTA 38 (152) T ss_dssp HHHHHHHHHHHHHHTTCEEEEEE T ss_pred HHHHHHHHHHHHHHCCCCEEEEC T ss_conf 34799999999875697169955 No 74 >d1veca_ c.37.1.19 (A:) DEAD box RNA helicase rck/p54 {Human (Homo sapiens) [TaxId: 9606]} Probab=62.37 E-value=4.5 Score=17.94 Aligned_cols=95 Identities=16% Similarity=0.188 Sum_probs=39.7 Q ss_pred CCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCEEEECCCCCHHHHCCHHHHHHHCCC-----CCCCCCHHHHHHH Q ss_conf 78887489999999985247315987604578777755871456788770421233220576-----3465201225664 Q gi|254780401|r 55 GGTGKTPTALAIAKAVIDKNLKPGFLSRGYGRKSRISFRVDLEKHSAYDVGDEPLLLARRAV-----TIVTSDRKIGVQM 129 (338) Q Consensus 55 GGtGKTP~v~~l~~~l~~~g~~~~ilsRGYg~~~~~~~~v~~~~~~~~~vGDEp~lla~~~p-----v~V~~~R~~~~~~ 129 (338) =||||| ..|+.-.+.....+ ++......+.+....+.++-++...+..... ...+......... T Consensus 49 TGsGKT--layllP~l~~~~~~---------~~~~~~lil~pt~el~~q~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 117 (206) T d1veca_ 49 NGTGKS--GAYLIPLLERLDLK---------KDNIQAMVIVPTRELALQVSQICIQVSKHMGGAKVMATTGGTNLRDDIM 117 (206) T ss_dssp SSSTTH--HHHHHHHHHHCCTT---------SCSCCEEEECSCHHHHHHHHHHHHHHTTTSSSCCEEEECSSSCHHHHHH T ss_pred CCCCCC--CCCCCCHHHCCCCC---------CCCCCEEEEEECCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHH T ss_conf 740011--21246413202102---------5675249984030166899999998751156764212367740888999 Q ss_pred HCCCCCCEEEEC-----CCCCCCCC-CCEEEEEEECC Q ss_conf 102457479971-----83223441-23069999618 Q gi|254780401|r 130 LLQEGVDIIIMD-----DGFHSADL-QADFSLIVVNS 160 (338) Q Consensus 130 ~~~~~~diiIlD-----DGfQh~~l-~rdl~Ivl~d~ 160 (338) ..+.++|+||.- |-+++..+ ..++..+++|- T Consensus 118 ~l~~~~~ivv~TPgrl~~~~~~~~~~~~~l~~lVlDE 154 (206) T d1veca_ 118 RLDDTVHVVIATPGRILDLIKKGVAKVDHVQMIVLDE 154 (206) T ss_dssp HTTSCCSEEEECHHHHHHHHHTTCSCCTTCCEEEEET T ss_pred HHHHCCCEEEECCCCCCCCCCCHHCCCCCCCEEEEEC T ss_conf 8875167089479633112331100015540699841 No 75 >d1u94a1 c.37.1.11 (A:6-268) RecA protein, ATPase-domain {Escherichia coli [TaxId: 562]} Probab=62.35 E-value=3 Score=19.18 Aligned_cols=43 Identities=21% Similarity=0.359 Sum_probs=31.9 Q ss_pred CCCCCCCEEEECCE-----E-EC--------------CCCCCHHHHHHHHHHHHCCCCEEEEE Q ss_conf 43388988998230-----0-07--------------88874899999999852473159876 Q gi|254780401|r 39 RLHAPIPVICVGGF-----V-MG--------------GTGKTPTALAIAKAVIDKNLKPGFLS 81 (338) Q Consensus 39 ~~~~~~pVI~VGNi-----t-vG--------------GtGKTP~v~~l~~~l~~~g~~~~ils 81 (338) .....++.|+-|.. . .| |+|||-+++.++...++.|..++.+. T Consensus 27 ~~~~~~~~isTG~~~lD~~Lg~GGi~~g~itei~G~~gsGKTtl~l~~~~~~q~~g~~~vyid 89 (263) T d1u94a1 27 DRSMDVETISTGSLSLDIALGAGGLPMGRIVEIYGPESSGKTTLTLQVIAAAQREGKTCAFID 89 (263) T ss_dssp CCBCCCCEECCSCHHHHHHTSSSSEETTSEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEE T ss_pred CCCCCCCEECCCCHHHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEEC T ss_conf 667778757169889999756799667358998057774789999999999870898799986 No 76 >d1viaa_ c.37.1.2 (A:) Shikimate kinase (AroK) {Campylobacter jejuni [TaxId: 197]} Probab=61.87 E-value=2.5 Score=19.68 Aligned_cols=23 Identities=35% Similarity=0.624 Sum_probs=19.1 Q ss_pred CEEEECCEEECCCCCCHHHHHHHHHH Q ss_conf 88998230007888748999999998 Q gi|254780401|r 45 PVICVGGFVMGGTGKTPTALAIAKAV 70 (338) Q Consensus 45 pVI~VGNitvGGtGKTP~v~~l~~~l 70 (338) .|+.+| +-|+|||-+...||+.| T Consensus 2 ~I~liG---~~GsGKsTi~k~La~~l 24 (161) T d1viaa_ 2 NIVFIG---FMGSGKSTLARALAKDL 24 (161) T ss_dssp CEEEEC---CTTSCHHHHHHHHHHHH T ss_pred CEEEEC---CCCCCHHHHHHHHHHHH T ss_conf 399989---99998899999999983 No 77 >d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]} Probab=61.77 E-value=4.3 Score=18.07 Aligned_cols=32 Identities=28% Similarity=0.264 Sum_probs=25.0 Q ss_pred EEECCCCCCHHHHHHHHHHHHCCCCEEEEEECCC Q ss_conf 0007888748999999998524731598760457 Q gi|254780401|r 52 FVMGGTGKTPTALAIAKAVIDKNLKPGFLSRGYG 85 (338) Q Consensus 52 itvGGtGKTP~v~~l~~~l~~~g~~~~ilsRGYg 85 (338) +.+||||-. =..|++.|.++|++|.+++|.-. T Consensus 7 LVtGatG~i--G~~l~~~L~~~G~~V~~~~R~~~ 38 (312) T d1qyda_ 7 LIVGGTGYI--GKRIVNASISLGHPTYVLFRPEV 38 (312) T ss_dssp EEESTTSTT--HHHHHHHHHHTTCCEEEECCSCC T ss_pred EEECCCCHH--HHHHHHHHHHCCCEEEEEECCCC T ss_conf 998998789--99999999968797999989874 No 78 >d1rzua_ c.87.1.8 (A:) Glycogen synthase 1, GlgA {Agrobacterium tumefaciens [TaxId: 358]} Probab=61.67 E-value=1.5 Score=21.26 Aligned_cols=32 Identities=22% Similarity=0.281 Sum_probs=27.0 Q ss_pred EECCCCCCHHHHHHHHHHHHCCCCEEEEEECCCC Q ss_conf 0078887489999999985247315987604578 Q gi|254780401|r 53 VMGGTGKTPTALAIAKAVIDKNLKPGFLSRGYGR 86 (338) Q Consensus 53 tvGGtGKTP~v~~l~~~l~~~g~~~~ilsRGYg~ 86 (338) .+||-|. +|-.|++.|.++|.+|.|++-.|+. T Consensus 15 ~~GGl~~--vv~~La~~L~~~Gh~V~Vi~P~y~~ 46 (477) T d1rzua_ 15 KTGGLAD--VVGALPIALEAHGVRTRTLIPGYPA 46 (477) T ss_dssp CSSHHHH--HHHHHHHHHHTTTCEEEEEEECCHH T ss_pred CCCCHHH--HHHHHHHHHHHCCCEEEEEECCCCC T ss_conf 2676899--9999999999769969999669853 No 79 >d1uz5a3 c.57.1.2 (A:181-328) MoeA, central domain {Archaeon Pyrococcus horikoshii, PH0582 [TaxId: 53953]} Probab=61.60 E-value=4.6 Score=17.85 Aligned_cols=69 Identities=17% Similarity=0.258 Sum_probs=30.3 Q ss_pred HHHCCHHHHHHHHHHHHCCCCH----H----HHHHHCCCCHHHHHHHH---CCCCCCCCCEEEEEECCCCHHHHHHHHHH Q ss_conf 5210025566514544204412----4----57763135011122220---13211168638987415535789998874 Q gi|254780401|r 175 LRVPLSRQLSYVDAILYVGNKK----N----VISSIKNKSVYFAKLKP---RLTFDLSGKKVLAFSGIADTEKFFTTVRQ 243 (338) Q Consensus 175 LREp~~~~l~rad~vi~~~~~~----~----~~~~~~~~~i~~~~~~~---~~~~~l~~k~v~afsGIa~P~~F~~~L~~ 243 (338) +++-+.++++++|+||+||... + ..+.....-+.....+| .....+.++.++.+ =|||...+-.+.. T Consensus 56 i~~~i~~~~~~~DliIttGG~s~g~~D~~~~~l~~~g~~~~~~v~i~PG~p~~~g~~~~~~v~~L--PG~P~s~~~~~~~ 133 (148) T d1uz5a3 56 LKALIEKAVNVGDVVVISGGASGGTKDLTASVIEELGEVKVHGIAIQPGKPTIIGVIKGKPVFGL--PGYPTSCLTNFTL 133 (148) T ss_dssp HHHHHHHHHHHCSEEEEECCC-----CHHHHHHHHHSEEEEECBSEESCTTCEEEEETTEEEEEE--CSSHHHHHHHHHH T ss_pred HHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCEEEEEECCEEEEEC--CCCHHHHHHHHHH T ss_conf 88999864134668998787555414679999998182250466887237425522598799987--8987999999999 Q ss_pred HC Q ss_conf 01 Q gi|254780401|r 244 LG 245 (338) Q Consensus 244 ~g 245 (338) +- T Consensus 134 ~v 135 (148) T d1uz5a3 134 LV 135 (148) T ss_dssp HH T ss_pred HH T ss_conf 99 No 80 >d1m7ga_ c.37.1.4 (A:) Adenosine-5'phosphosulfate kinase (APS kinase) {Fungus (Penicillium chrysogenum) [TaxId: 5076]} Probab=61.39 E-value=1.9 Score=20.58 Aligned_cols=29 Identities=14% Similarity=0.322 Sum_probs=20.6 Q ss_pred CCCCCCHHHHHHHHHHHHCCCCEEEEEEC Q ss_conf 78887489999999985247315987604 Q gi|254780401|r 55 GGTGKTPTALAIAKAVIDKNLKPGFLSRG 83 (338) Q Consensus 55 GGtGKTP~v~~l~~~l~~~g~~~~ilsRG 83 (338) =|+|||-++..|++.|.+.....+++..| T Consensus 33 sGsGKTTia~~L~~~l~~~~~~~~~~ldg 61 (208) T d1m7ga_ 33 SASGKSTLAVELEHQLVRDRRVHAYRLDG 61 (208) T ss_dssp TTSSHHHHHHHHHHHHHHHHCCCEEEECH T ss_pred CCCCHHHHHHHHHHHHHHHCCCEEEEECC T ss_conf 99998999999998877742750899753 No 81 >d1cqxa3 c.25.1.5 (A:262-403) Flavohemoglobin, C-terminal domain {Alcaligenes eutrophus [TaxId: 106590]} Probab=61.38 E-value=2.7 Score=19.54 Aligned_cols=28 Identities=25% Similarity=0.459 Sum_probs=19.2 Q ss_pred CCCEEEECCEEECCCCCCHHHHHHHHHHHHCC Q ss_conf 89889982300078887489999999985247 Q gi|254780401|r 43 PIPVICVGGFVMGGTGKTPTALAIAKAVIDKN 74 (338) Q Consensus 43 ~~pVI~VGNitvGGtGKTP~v~~l~~~l~~~g 74 (338) .-|+|. .+||||=||+.-.+-..+...+ T Consensus 5 ~~plvl----iagGtGIaP~~sil~~~~~~~~ 32 (142) T d1cqxa3 5 KTPIVL----ISGGVGLTPMVSMLKVALQAPP 32 (142) T ss_dssp CSCEEE----EESSCCHHHHHHHHHHHTCSSC T ss_pred CCCEEE----EECCEEHHHHHHHHHHHHHCCC T ss_conf 997899----9865448999999999997699 No 82 >d1w36d1 c.37.1.19 (D:2-360) Exodeoxyribonuclease V alpha chain (RecD) {Escherichia coli [TaxId: 562]} Probab=61.11 E-value=3 Score=19.20 Aligned_cols=18 Identities=44% Similarity=0.578 Sum_probs=13.0 Q ss_pred CCCCCCHHHHHHHHHHHH Q ss_conf 788874899999999852 Q gi|254780401|r 55 GGTGKTPTALAIAKAVID 72 (338) Q Consensus 55 GGtGKTP~v~~l~~~l~~ 72 (338) .|||||-++..+...+.+ T Consensus 172 pGTGKTt~i~~~l~~l~~ 189 (359) T d1w36d1 172 PGTGKTTTVAKLLAALIQ 189 (359) T ss_dssp TTSTHHHHHHHHHHHHHH T ss_pred CCCCCEEHHHHHHHHHHH T ss_conf 988752169999999999 No 83 >d1lw7a2 c.37.1.1 (A:220-411) Transcriptional regulator NadR, ribosylnicotinamide kinase domain {Haemophilus influenzae [TaxId: 727]} Probab=60.85 E-value=1.6 Score=21.16 Aligned_cols=26 Identities=23% Similarity=0.263 Sum_probs=20.4 Q ss_pred CCCCEEEECCEEECCCCCCHHHHHHHHHH Q ss_conf 88988998230007888748999999998 Q gi|254780401|r 42 APIPVICVGGFVMGGTGKTPTALAIAKAV 70 (338) Q Consensus 42 ~~~pVI~VGNitvGGtGKTP~v~~l~~~l 70 (338) ++-.|+.+|.- |||||-++..|++.+ T Consensus 6 ~~K~I~i~G~~---GsGKTTla~~La~~~ 31 (192) T d1lw7a2 6 FAKTVAILGGE---SSGKSVLVNKLAAVF 31 (192) T ss_dssp TCEEEEEECCT---TSHHHHHHHHHHHHT T ss_pred CCEEEEEECCC---CCCHHHHHHHHHHHH T ss_conf 63289998999---998999999999984 No 84 >d1a1va1 c.37.1.14 (A:190-325) HCV helicase domain {Human hepatitis C virus (HCV), different isolates [TaxId: 11103]} Probab=60.43 E-value=2.9 Score=19.24 Aligned_cols=24 Identities=25% Similarity=0.315 Sum_probs=15.9 Q ss_pred CCCCCCHHHHHHHHHHHHCCCCEEEEE Q ss_conf 788874899999999852473159876 Q gi|254780401|r 55 GGTGKTPTALAIAKAVIDKNLKPGFLS 81 (338) Q Consensus 55 GGtGKTP~v~~l~~~l~~~g~~~~ils 81 (338) =|+|||=+. ...+.+.|.++.++. T Consensus 17 TGsGKT~~~---~~~~~~~~~~vli~~ 40 (136) T d1a1va1 17 TGSGKSTKV---PAAYAAQGYKVLVLN 40 (136) T ss_dssp TTSCTTTHH---HHHHHTTTCCEEEEE T ss_pred CCCCHHHHH---HHHHHHCCCCEEEEC T ss_conf 877999999---999998699399976 No 85 >d1eg7a_ c.37.1.10 (A:) Formyltetrahydrofolate synthetase {Moorella thermoacetica [TaxId: 1525]} Probab=60.16 E-value=3.4 Score=18.77 Aligned_cols=39 Identities=23% Similarity=0.238 Sum_probs=32.3 Q ss_pred CCEEEECCE--EECCCCCCHHHHHHHHHHHHCCCCEEEEEE Q ss_conf 988998230--007888748999999998524731598760 Q gi|254780401|r 44 IPVICVGGF--VMGGTGKTPTALAIAKAVIDKNLKPGFLSR 82 (338) Q Consensus 44 ~pVI~VGNi--tvGGtGKTP~v~~l~~~l~~~g~~~~ilsR 82 (338) -..|.|--+ |-=|-|||-+++-|++-|.+.|++..+-.| T Consensus 51 gklilVTaitPTp~GEGKtTttiGL~~aL~~lgk~~~~~lR 91 (549) T d1eg7a_ 51 GKLILVTAITPTPAGEGKTTTSVGLTDALARLGKRVMVCLR 91 (549) T ss_dssp CEEEEEEESSCCTTCCCHHHHHHHHHHHHHHTTCCEEEEEC T ss_pred CEEEEEEECCCCCCCCCCCEEHHHHHHHHHHHCCCEEEEEE T ss_conf 64999985789888898510288699999870984589972 No 86 >d1uj2a_ c.37.1.6 (A:) Uridine-cytidine kinase 2 {Human (Homo sapiens) [TaxId: 9606]} Probab=60.00 E-value=2.9 Score=19.33 Aligned_cols=28 Identities=18% Similarity=0.226 Sum_probs=21.9 Q ss_pred CCCCCCHHHHHHHHHHHHCC-----CCEEEEEE Q ss_conf 78887489999999985247-----31598760 Q gi|254780401|r 55 GGTGKTPTALAIAKAVIDKN-----LKPGFLSR 82 (338) Q Consensus 55 GGtGKTP~v~~l~~~l~~~g-----~~~~ilsR 82 (338) .|+|||-++-.|++.|...+ .++.+++- T Consensus 11 ~gSGKSTla~~L~~~l~~~~~~~~~~~~~vi~~ 43 (213) T d1uj2a_ 11 TASGKSSVCAKIVQLLGQNEVDYRQKQVVILSQ 43 (213) T ss_dssp TTSSHHHHHHHHHHHTTGGGSCGGGCSEEEEEG T ss_pred CCCCHHHHHHHHHHHHCHHCCCCCCCCEEEEEC T ss_conf 978799999999999641013457884399934 No 87 >d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]} Probab=59.95 E-value=4.9 Score=17.66 Aligned_cols=30 Identities=20% Similarity=0.235 Sum_probs=25.5 Q ss_pred EEECCCCCCHHHHHHHHHHHHCCCCEEEEEEC Q ss_conf 00078887489999999985247315987604 Q gi|254780401|r 52 FVMGGTGKTPTALAIAKAVIDKNLKPGFLSRG 83 (338) Q Consensus 52 itvGGtGKTP~v~~l~~~l~~~g~~~~ilsRG 83 (338) |.+|||| -+=.+|++.|.++|++|..+.|. T Consensus 5 LVTGatG--fiG~~lv~~Ll~~g~~V~~~~r~ 34 (339) T d1n7ha_ 5 LITGITG--QDGSYLTEFLLGKGYEVHGLIRR 34 (339) T ss_dssp EEETTTS--HHHHHHHHHHHHTTCEEEEEECC T ss_pred EEECCCC--HHHHHHHHHHHHCCCEEEEEECC T ss_conf 9968864--89999999999784989999788 No 88 >d1pjra1 c.37.1.19 (A:1-318) DEXX box DNA helicase {Bacillus stearothermophilus, PcrA [TaxId: 1422]} Probab=59.57 E-value=5 Score=17.61 Aligned_cols=84 Identities=10% Similarity=0.086 Sum_probs=37.3 Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEECHHHHHHCCCCCCCCHHHHC-------CEEEEEEEEEECCHHHHHHHH Q ss_conf 1221433234898999999997564798799854663438233344111220-------517887698957878999999 Q gi|254780401|r 250 QCYSFGDHAHLSDKKIAYLLDQAQQKGLILVTTAKDAMRLHKRPGRAEEIFA-------KSMVIEVDIVFENPDDLTNLV 322 (338) Q Consensus 250 ~~~~fpDHh~ys~~dl~~i~~~a~~~~~~iiTTEKD~VKL~~~~~~~~~l~~-------~~~~l~i~~~~~~~~~l~~~l 322 (338) +++...+.+.++.-.++-+.......+..++.-..+ ..+-.+.......+. ..-.+.++..+....+..++. T Consensus 218 ~~i~iDE~QD~s~~q~~~~~~l~~~~~~~~~~gD~~-Q~I~~f~ga~~~~~~~~~~~~~~~~~~~L~~nyRs~~~I~~~a 296 (318) T d1pjra1 218 QYIHIDEYQDTNRAQYTLVKKLAERFQNICAVGDAD-QSIYRWRGADIQNILSFERDYPNAKVILLEQNYRSTKRILQAA 296 (318) T ss_dssp SEEEESSGGGCCHHHHHHHHHHHTTTCCEEEEECGG-GCCCGGGTCCTHHHHTHHHHSTTCEEEEECBCSSSCHHHHHHH T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCC-CCCCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHH T ss_conf 111038777778999999999987615635631565-3101466678599999998689988997999999769999999 Q ss_pred HHHHHHHHHHCC Q ss_conf 999999863134 Q gi|254780401|r 323 EMTVVSFANSNK 334 (338) Q Consensus 323 ~~~i~~~~n~~~ 334 (338) .+.+....++.. T Consensus 297 n~ll~~~~~r~~ 308 (318) T d1pjra1 297 NEVIEHNVNRKP 308 (318) T ss_dssp HHHHTTCSSCCC T ss_pred HHHHHCCCCCCC T ss_conf 999970722479 No 89 >d1xp8a1 c.37.1.11 (A:15-282) RecA protein, ATPase-domain {Deinococcus radiodurans [TaxId: 1299]} Probab=58.72 E-value=3.4 Score=18.75 Aligned_cols=44 Identities=25% Similarity=0.360 Sum_probs=31.8 Q ss_pred CCCCCCCCEEEECCEE------EC--------------CCCCCHHHHHHHHHHHHCCCCEEEEE Q ss_conf 6433889889982300------07--------------88874899999999852473159876 Q gi|254780401|r 38 QRLHAPIPVICVGGFV------MG--------------GTGKTPTALAIAKAVIDKNLKPGFLS 81 (338) Q Consensus 38 ~~~~~~~pVI~VGNit------vG--------------GtGKTP~v~~l~~~l~~~g~~~~ils 81 (338) .....++++|+-|... .| |||||-+++.++...++.|.+++.+. T Consensus 29 ~~~~~~~~~i~TGs~~lD~~Lg~GGip~g~itei~G~~~sGKT~l~l~~~~~aqk~g~~v~yiD 92 (268) T d1xp8a1 29 AESKLDVQVVSTGSLSLDLALGVGGIPRGRITEIYGPESGGKTTLALAIVAQAQKAGGTCAFID 92 (268) T ss_dssp SCCCCCCCEECCSCHHHHHHTSSSSEETTSEEEEEESTTSSHHHHHHHHHHHHHHTTCCEEEEE T ss_pred CCCCCCCCEECCCCHHHHHHHCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEE T ss_conf 7678877767478889999756798667547898058765227999999999970799899998 No 90 >d1ckea_ c.37.1.1 (A:) CMP kinase {Escherichia coli [TaxId: 562]} Probab=58.07 E-value=3.4 Score=18.83 Aligned_cols=32 Identities=38% Similarity=0.584 Sum_probs=22.6 Q ss_pred CCEEEE-CCEEECCCCCCHHHHHHHHHHHHCCCCEEEEEEC Q ss_conf 988998-2300078887489999999985247315987604 Q gi|254780401|r 44 IPVICV-GGFVMGGTGKTPTALAIAKAVIDKNLKPGFLSRG 83 (338) Q Consensus 44 ~pVI~V-GNitvGGtGKTP~v~~l~~~l~~~g~~~~ilsRG 83 (338) .|||+| |= =|+|||-.+..|++.| ...-||=| T Consensus 3 ~piI~I~Gp---pGSGKgT~ak~La~~~-----gl~~iStG 35 (225) T d1ckea_ 3 APVITIDGP---SGAGKGTLCKAMAEAL-----QWHLLDSG 35 (225) T ss_dssp SCEEEEECC---TTSSHHHHHHHHHHHH-----TCEEEEHH T ss_pred CCEEEEECC---CCCCHHHHHHHHHHHH-----CCCEECHH T ss_conf 988997799---9889899999999996-----99089888 No 91 >d1ddga2 c.25.1.4 (A:447-599) Sulfite reductase flavoprotein {Escherichia coli [TaxId: 562]} Probab=57.99 E-value=5.3 Score=17.43 Aligned_cols=36 Identities=25% Similarity=0.372 Sum_probs=25.3 Q ss_pred CCCCCEEEECCEEECCCCCCHHHHHHHHHHHHCCCCEEEE Q ss_conf 3889889982300078887489999999985247315987 Q gi|254780401|r 41 HAPIPVICVGGFVMGGTGKTPTALAIAKAVIDKNLKPGFL 80 (338) Q Consensus 41 ~~~~pVI~VGNitvGGtGKTP~v~~l~~~l~~~g~~~~il 80 (338) ..+.|+|.| .||||=||+.-.|-..+........++ T Consensus 4 d~~~plvlI----a~GtGIaP~~s~l~~~~~~~~~~~~~l 39 (153) T d1ddga2 4 NPETPVIMI----GPGTGIAPFRAFMQQRAADEAPGKNWL 39 (153) T ss_dssp STTSCEEEE----CCGGGGHHHHHHHHHHHHHTCCSCEEE T ss_pred CCCCCEEEE----ECCHHHHHHHHHHHHHHHHCCCCCEEE T ss_conf 999999999----875219999999999998368773488 No 92 >d1sxja2 c.37.1.20 (A:295-547) Replication factor C1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Probab=57.08 E-value=1.8 Score=20.72 Aligned_cols=32 Identities=22% Similarity=0.205 Sum_probs=22.8 Q ss_pred CEEEECCEEECCCCCCHHHHHHHHHHHHCCCCEEEEEE Q ss_conf 88998230007888748999999998524731598760 Q gi|254780401|r 45 PVICVGGFVMGGTGKTPTALAIAKAVIDKNLKPGFLSR 82 (338) Q Consensus 45 pVI~VGNitvGGtGKTP~v~~l~~~l~~~g~~~~ilsR 82 (338) .++-.|. =|||||-++..+|+.+ +..+..++- T Consensus 54 ~lll~GP---pG~GKTt~a~~la~~~---~~~~~~~~~ 85 (253) T d1sxja2 54 AAMLYGP---PGIGKTTAAHLVAQEL---GYDILEQNA 85 (253) T ss_dssp EEEEECS---TTSSHHHHHHHHHHHT---TCEEEEECT T ss_pred EEEEECC---CCCCHHHHHHHHHHHH---HHHHHCCCC T ss_conf 4999879---9998889999999998---751201344 No 93 >d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]} Probab=56.91 E-value=5.5 Score=17.31 Aligned_cols=29 Identities=21% Similarity=0.300 Sum_probs=23.5 Q ss_pred EEECCCCCCHHHHHHHHHHHHCCCCEEEEEE Q ss_conf 0007888748999999998524731598760 Q gi|254780401|r 52 FVMGGTGKTPTALAIAKAVIDKNLKPGFLSR 82 (338) Q Consensus 52 itvGGtGKTP~v~~l~~~l~~~g~~~~ilsR 82 (338) |++|||| =+=-+|++.|.++|++|..+.| T Consensus 5 LVTG~tG--fIG~~l~~~Ll~~g~~V~~i~r 33 (347) T d1t2aa_ 5 LITGITG--QDGSYLAEFLLEKGYEVHGIVR 33 (347) T ss_dssp EEETTTS--HHHHHHHHHHHHTTCEEEEEEC T ss_pred EEECCCC--HHHHHHHHHHHHCCCEEEEEEC T ss_conf 9904776--8999999999978398999988 No 94 >d1zaka1 c.37.1.1 (A:3-127,A:159-222) Adenylate kinase {Maize (Zea mays) [TaxId: 4577]} Probab=56.64 E-value=3.9 Score=18.36 Aligned_cols=25 Identities=24% Similarity=0.353 Sum_probs=20.0 Q ss_pred CCCEEEECCEEECCCCCCHHHHHHHHHH Q ss_conf 8988998230007888748999999998 Q gi|254780401|r 43 PIPVICVGGFVMGGTGKTPTALAIAKAV 70 (338) Q Consensus 43 ~~pVI~VGNitvGGtGKTP~v~~l~~~l 70 (338) |..|+..|.- |+|||-.+..|++.+ T Consensus 3 Pm~I~i~Gpp---GsGKsT~a~~La~~~ 27 (189) T d1zaka1 3 PLKVMISGAP---ASGKGTQCELIKTKY 27 (189) T ss_dssp SCCEEEEEST---TSSHHHHHHHHHHHH T ss_pred CEEEEEECCC---CCCHHHHHHHHHHHH T ss_conf 7299998899---999899999999987 No 95 >d1o51a_ d.58.5.4 (A:) Hypothetical protein TM0021 {Thermotoga maritima [TaxId: 2336]} Probab=56.50 E-value=5.6 Score=17.26 Aligned_cols=74 Identities=14% Similarity=0.043 Sum_probs=41.0 Q ss_pred CCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCEEEECCCCCHHHHCCHHHHHHHCCCCC---C-CCCHHHHHHH-HCCC Q ss_conf 748999999998524731598760457877775587145678877042123322057634---6-5201225664-1024 Q gi|254780401|r 59 KTPTALAIAKAVIDKNLKPGFLSRGYGRKSRISFRVDLEKHSAYDVGDEPLLLARRAVTI---V-TSDRKIGVQM-LLQE 133 (338) Q Consensus 59 KTP~v~~l~~~l~~~g~~~~ilsRGYg~~~~~~~~v~~~~~~~~~vGDEp~lla~~~pv~---V-~~~R~~~~~~-~~~~ 133 (338) --|+..||.+.+++.|..=+.+.||.-|-.... .-| .+..+-++..-|++ | .++|.++... +.+. T Consensus 18 g~pl~~~iv~~ar~~giaGaTv~rgi~GfG~~~-----~~h-----~~~~~~ls~dlPv~Ie~vd~~eki~~~l~~l~~~ 87 (102) T d1o51a_ 18 GKPLFEYLVKRAYELGMKGVTVYRGIMGFGHKR-----HMH-----RSDFFSLSPDLPIVLEIVDEEERINLFLKEIDNI 87 (102) T ss_dssp TEEHHHHHHHHHHHTTCSCCEEEECSCCCCC-----------------------CCCEEEEEEEECHHHHHHHHHHHHTC T ss_pred CEEHHHHHHHHHHHCCCCCEEEEEEEEEECCCC-----CEE-----CCCHHHHCCCCCEEEEEECCHHHHHHHHHHHHHH T ss_conf 559999999999987998079993125437999-----674-----1522221799988999978899999999999987 Q ss_pred -CCCEEEECC Q ss_conf -574799718 Q gi|254780401|r 134 -GVDIIIMDD 142 (338) Q Consensus 134 -~~diiIlDD 142 (338) .--+|++.| T Consensus 88 ~~~glvt~e~ 97 (102) T d1o51a_ 88 DFDGLVFTAD 97 (102) T ss_dssp CCCSEEEEEE T ss_pred CCCCEEEEEE T ss_conf 4785699999 No 96 >d2bmfa2 c.37.1.14 (A:178-482) Dengue virus helicase {Dengue virus type 2 [TaxId: 11060]} Probab=56.34 E-value=4.7 Score=17.82 Aligned_cols=53 Identities=19% Similarity=0.178 Sum_probs=29.5 Q ss_pred CCEEEEEE-CCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCC-CEEEECH Q ss_conf 86389874-15535789998874010000122143323489899999999756479-8799854 Q gi|254780401|r 222 GKKVLAFS-GIADTEKFFTTVRQLGALIEQCYSFGDHAHLSDKKIAYLLDQAQQKG-LILVTTA 283 (338) Q Consensus 222 ~k~v~afs-GIa~P~~F~~~L~~~g~~i~~~~~fpDHh~ys~~dl~~i~~~a~~~~-~~iiTTE 283 (338) +.+++.|| ...+-+...+.|++.|..+... |......+ ....++.. ..+++|. T Consensus 178 ~~~~lvf~~~~~~~~~l~~~L~~~~~~~~~l-----~~~~~~~~----~~~~~~~~~~~lvaT~ 232 (305) T d2bmfa2 178 KGKTVWFVPSIKAGNDIAACLRKNGKKVIQL-----SRKTFDSE----YIKTRTNDWDFVVTTD 232 (305) T ss_dssp CSCEEEECSCHHHHHHHHHHHHHHTCCCEEC-----CTTCHHHH----GGGGGTSCCSEEEECG T ss_pred CCCEEEEECCHHHHHHHHHHHHHCCCCEEEE-----CCCCHHHH----HHHHHCCCHHHHHHHH T ss_conf 7998999630999999999998679989995-----78384777----7543100011355567 No 97 >d1htwa_ c.37.1.18 (A:) Hypothetical protein HI0065 {Haemophilus influenzae [TaxId: 727]} Probab=56.26 E-value=1.9 Score=20.56 Aligned_cols=26 Identities=23% Similarity=0.338 Sum_probs=20.7 Q ss_pred CEEEECCEEECCCCCCHHHHHHHHHHHHC Q ss_conf 88998230007888748999999998524 Q gi|254780401|r 45 PVICVGGFVMGGTGKTPTALAIAKAVIDK 73 (338) Q Consensus 45 pVI~VGNitvGGtGKTP~v~~l~~~l~~~ 73 (338) -|.-.|.+ |+|||-+|..+++.|--. T Consensus 35 ii~L~G~L---GaGKTtfvr~~~~~lg~~ 60 (158) T d1htwa_ 35 MVYLNGDL---GAGKTTLTRGMLQGIGHQ 60 (158) T ss_dssp EEEEECST---TSSHHHHHHHHHHHTTCC T ss_pred EEEEECCC---CCCHHHHHHHHHHHCCCC T ss_conf 99996687---765889999987642234 No 98 >d1tmka_ c.37.1.1 (A:) Thymidylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Probab=55.35 E-value=2.1 Score=20.21 Aligned_cols=21 Identities=24% Similarity=0.164 Sum_probs=18.0 Q ss_pred CCCCCCHHHHHHHHHHHHCCC Q ss_conf 788874899999999852473 Q gi|254780401|r 55 GGTGKTPTALAIAKAVIDKNL 75 (338) Q Consensus 55 GGtGKTP~v~~l~~~l~~~g~ 75 (338) -|+|||-.+..|++.|++++. T Consensus 12 DGsGKST~~~~L~~~L~~~~~ 32 (214) T d1tmka_ 12 DRTGKTTQCNILYKKLQPNCK 32 (214) T ss_dssp TTSSHHHHHHHHHHHTTTSEE T ss_pred CCCCHHHHHHHHHHHHHHCCE T ss_conf 888699999999999971977 No 99 >d1ja1a3 c.25.1.4 (A:519-678) NADPH-cytochrome p450 reductase {Rat (Rattus norvegicus) [TaxId: 10116]} Probab=55.10 E-value=5.3 Score=17.40 Aligned_cols=27 Identities=37% Similarity=0.524 Sum_probs=21.3 Q ss_pred CCCCCCEEEECCEEECCCCCCHHHHHHHHHH Q ss_conf 3388988998230007888748999999998 Q gi|254780401|r 40 LHAPIPVICVGGFVMGGTGKTPTALAIAKAV 70 (338) Q Consensus 40 ~~~~~pVI~VGNitvGGtGKTP~v~~l~~~l 70 (338) ...+.|+|.|| ||||=+|+--+|-+.. T Consensus 4 ~~~~~PiimIa----~GTGIAPf~s~l~~r~ 30 (160) T d1ja1a3 4 FKSTTPVIMVG----PGTGIAPFMGFIQERA 30 (160) T ss_dssp SSTTSCEEEEC----CGGGGHHHHHHHHHHH T ss_pred CCCCCCEEEEE----CCHHHHHHHHHHHHHH T ss_conf 69999999997----6382999999999999 No 100 >d1wu2a3 c.57.1.2 (A:181-324) MoeA, central domain {Pyrococcus horikoshii, PH1647 [TaxId: 53953]} Probab=54.91 E-value=5 Score=17.60 Aligned_cols=21 Identities=24% Similarity=0.381 Sum_probs=9.8 Q ss_pred CCEEEEEECCCCHHHHHHHHHHH Q ss_conf 86389874155357899988740 Q gi|254780401|r 222 GKKVLAFSGIADTEKFFTTVRQL 244 (338) Q Consensus 222 ~k~v~afsGIa~P~~F~~~L~~~ 244 (338) |+.++.+. |||-.-+-.++.+ T Consensus 110 g~~v~~LP--G~P~sa~~~~~~~ 130 (144) T d1wu2a3 110 GEKVFIMS--GYPVSVFAQFNLF 130 (144) T ss_dssp ETTEEECC--SSHHHHHHHHHHT T ss_pred CCEEECCC--CCHHHHHHHHHHH T ss_conf 65633388--8839999999999 No 101 >d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]} Probab=54.79 E-value=5.9 Score=17.08 Aligned_cols=32 Identities=22% Similarity=0.357 Sum_probs=25.2 Q ss_pred EEECCCCCCHHHHHHHHHHHHCCCCEEEEEECCC Q ss_conf 0007888748999999998524731598760457 Q gi|254780401|r 52 FVMGGTGKTPTALAIAKAVIDKNLKPGFLSRGYG 85 (338) Q Consensus 52 itvGGtGKTP~v~~l~~~l~~~g~~~~ilsRGYg 85 (338) +.+||||.. =..+++.|.++|+++.+++|--. T Consensus 7 lV~GatG~i--G~~v~~~Ll~~g~~V~~~~R~~~ 38 (205) T d1hdoa_ 7 AIFGATGQT--GLTTLAQAVQAGYEVTVLVRDSS 38 (205) T ss_dssp EEESTTSHH--HHHHHHHHHHTTCEEEEEESCGG T ss_pred EEECCCCHH--HHHHHHHHHHCCCEEEEEECCHH T ss_conf 999998789--99999999978698999983716 No 102 >d2ocpa1 c.37.1.1 (A:37-277) Deoxyguanosine kinase {Human (Homo sapiens) [TaxId: 9606]} Probab=54.58 E-value=1.8 Score=20.71 Aligned_cols=27 Identities=15% Similarity=0.211 Sum_probs=20.7 Q ss_pred EECCEEECCCCCCHHHHHHHHHHHHCCCCE Q ss_conf 982300078887489999999985247315 Q gi|254780401|r 48 CVGGFVMGGTGKTPTALAIAKAVIDKNLKP 77 (338) Q Consensus 48 ~VGNitvGGtGKTP~v~~l~~~l~~~g~~~ 77 (338) .=|+. |+|||.++..|++.|.+.++.. T Consensus 7 iEG~~---GsGKST~~~~L~~~l~~~~i~~ 33 (241) T d2ocpa1 7 IEGNI---AVGKSTFVKLLTKTYPEWHVAT 33 (241) T ss_dssp EEECT---TSSHHHHHHHHHHHCTTSEEEC T ss_pred EECCC---CCCHHHHHHHHHHHHHHCCCCC T ss_conf 98998---8859999999999873038700 No 103 >d1n4wa1 c.3.1.2 (A:9-318,A:451-507) Cholesterol oxidase of GMC family {Streptomyces sp. [TaxId: 1931]} Probab=54.57 E-value=2 Score=20.38 Aligned_cols=32 Identities=16% Similarity=0.225 Sum_probs=26.1 Q ss_pred CCEEEECCEEECCCCCCHHHHHHHHHHHHCCCCEEEEEEC Q ss_conf 9889982300078887489999999985247315987604 Q gi|254780401|r 44 IPVICVGGFVMGGTGKTPTALAIAKAVIDKNLKPGFLSRG 83 (338) Q Consensus 44 ~pVI~VGNitvGGtGKTP~v~~l~~~l~~~g~~~~ilsRG 83 (338) |+||.||.=..|+ .+|..|.++|++|.+|=|| T Consensus 3 v~VIVVGsG~aG~--------v~A~rLaeaG~~VlvLEaG 34 (367) T d1n4wa1 3 VPAVVIGTGYGAA--------VSALRLGEAGVQTLMLEMG 34 (367) T ss_dssp EEEEEECCSHHHH--------HHHHHHHHTTCCEEEEESS T ss_pred CEEEEECCCHHHH--------HHHHHHHHCCCEEEEEECC T ss_conf 7099967698999--------9999997795919999168 No 104 >d2bisa1 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} Probab=53.81 E-value=5.1 Score=17.56 Aligned_cols=32 Identities=22% Similarity=0.257 Sum_probs=26.4 Q ss_pred ECCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCC Q ss_conf 0788874899999999852473159876045787 Q gi|254780401|r 54 MGGTGKTPTALAIAKAVIDKNLKPGFLSRGYGRK 87 (338) Q Consensus 54 vGGtGKTP~v~~l~~~l~~~g~~~~ilsRGYg~~ 87 (338) +||.| -.+..|++.|.++|+.|.|++..|..- T Consensus 15 ~GG~~--~~~~~La~~L~~~Gh~V~Vvtp~~~~~ 46 (437) T d2bisa1 15 VGGLA--EALTAISEALASLGHEVLVFTPSHGRF 46 (437) T ss_dssp SSSHH--HHHHHHHHHHHHTTCEEEEEEECTTSS T ss_pred CCCHH--HHHHHHHHHHHHCCCEEEEEECCCCCC T ss_conf 58799--999999999997699899990589865 No 105 >d1p9oa_ c.72.3.1 (A:) Phosphopantothenoylcysteine synthetase {Human (Homo sapiens) [TaxId: 9606]} Probab=53.65 E-value=2.6 Score=19.60 Aligned_cols=38 Identities=26% Similarity=0.327 Sum_probs=32.0 Q ss_pred CCCC-CEEEECCEEECCCCCCHHHHHHHHHHHHCCCCEEEEEEC Q ss_conf 3889-889982300078887489999999985247315987604 Q gi|254780401|r 41 HAPI-PVICVGGFVMGGTGKTPTALAIAKAVIDKNLKPGFLSRG 83 (338) Q Consensus 41 ~~~~-pVI~VGNitvGGtGKTP~v~~l~~~l~~~g~~~~ilsRG 83 (338) .... ||=+|+|.+.|-+|. +||+.+..+|+.|..+++- T Consensus 31 pID~~pVR~ItN~SSGk~G~-----alA~~~~~~Ga~V~li~g~ 69 (290) T d1p9oa_ 31 PLEARPVRFLDNFSSGRRGA-----TSAEAFLAAGYGVLFLYRA 69 (290) T ss_dssp ESSSSCSEEEEECCCCHHHH-----HHHHHHHHTTCEEEEEEET T ss_pred CCCCCCCEEECCCCCHHHHH-----HHHHHHHHCCCEEEEEECC T ss_conf 34799962768779659999-----9999999869979999368 No 106 >d2bmwa2 c.25.1.1 (A:142-303) Ferredoxin reductase (flavodoxin reductase) {Cyanobacterium (Anabaena sp.), pcc 7119 [TaxId: 1167]} Probab=52.89 E-value=3.3 Score=18.93 Aligned_cols=28 Identities=32% Similarity=0.425 Sum_probs=21.4 Q ss_pred CCCCCEEEECCEEECCCCCCHHHHHHHHHHHH Q ss_conf 38898899823000788874899999999852 Q gi|254780401|r 41 HAPIPVICVGGFVMGGTGKTPTALAIAKAVID 72 (338) Q Consensus 41 ~~~~pVI~VGNitvGGtGKTP~v~~l~~~l~~ 72 (338) ....|||.| .||||=||+...|-..+.. T Consensus 4 d~~~~~llI----agGtGIaP~~s~l~~~~~~ 31 (162) T d2bmwa2 4 DPEANVIML----AGGTGITPMRTYLWRMFKD 31 (162) T ss_dssp CTTCEEEEE----EEGGGHHHHHHHHHHHHCH T ss_pred CCCCCEEEE----ECCEEHHHHHHHHHHHHHC T ss_conf 989998999----7600199999999999972 No 107 >d1lv7a_ c.37.1.20 (A:) AAA domain of cell division protein FtsH {Escherichia coli [TaxId: 562]} Probab=52.69 E-value=4.3 Score=18.08 Aligned_cols=34 Identities=41% Similarity=0.341 Sum_probs=23.2 Q ss_pred CCCCEEEECCEEECCCCCCHHHHHHHHHHHHCCCCEEEEE Q ss_conf 8898899823000788874899999999852473159876 Q gi|254780401|r 42 APIPVICVGGFVMGGTGKTPTALAIAKAVIDKNLKPGFLS 81 (338) Q Consensus 42 ~~~pVI~VGNitvGGtGKTP~v~~l~~~l~~~g~~~~ils 81 (338) .|--++-.|.- |||||-++.++|+.+ |.....++ T Consensus 44 ~~~~iLL~Gpp---GtGKT~la~~iA~~~---~~~~~~i~ 77 (256) T d1lv7a_ 44 IPKGVLMVGPP---GTGKTLLAKAIAGEA---KVPFFTIS 77 (256) T ss_dssp CCCEEEEECCT---TSCHHHHHHHHHHHH---TCCEEEEC T ss_pred CCCEEEEECCC---CCCCCHHHHHHHHHC---CCCEEEEE T ss_conf 88867866899---888228999999982---99879988 No 108 >d1thta_ c.69.1.13 (A:) Myristoyl-ACP-specific thioesterase {Vibrio harveyi [TaxId: 669]} Probab=52.59 E-value=6.4 Score=16.84 Aligned_cols=89 Identities=9% Similarity=-0.029 Sum_probs=45.4 Q ss_pred CCCCCCHHHHHHHHHHHHCCCCEEEE-EECCCCCCCCCEEEECCCCCHHHHCCHHH---HHHHC--CCC-CCCCCHHH-- Q ss_conf 78887489999999985247315987-60457877775587145678877042123---32205--763-46520122-- Q gi|254780401|r 55 GGTGKTPTALAIAKAVIDKNLKPGFL-SRGYGRKSRISFRVDLEKHSAYDVGDEPL---LLARR--AVT-IVTSDRKI-- 125 (338) Q Consensus 55 GGtGKTP~v~~l~~~l~~~g~~~~il-sRGYg~~~~~~~~v~~~~~~~~~vGDEp~---lla~~--~pv-~V~~~R~~-- 125 (338) |.++-.-.-..++++|.++||.+... .||++|.+.+...- .+....+-|=.. .+... .++ ++|..--- T Consensus 40 G~~~~~~~~~~~a~~L~~~G~~Vi~~D~rGh~G~S~g~~~~---~~~~~~~~dl~~vi~~l~~~~~~~i~lvG~SmGG~i 116 (302) T d1thta_ 40 GFARRMDHFAGLAEYLSTNGFHVFRYDSLHHVGLSSGSIDE---FTMTTGKNSLCTVYHWLQTKGTQNIGLIAASLSARV 116 (302) T ss_dssp TTCGGGGGGHHHHHHHHTTTCCEEEECCCBCC--------C---CCHHHHHHHHHHHHHHHHHTTCCCEEEEEETHHHHH T ss_pred CCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCC---CCHHHHHHHHHHHHHHHHCCCCCEEEEEEECHHHHH T ss_conf 98442779999999999789989995678988788886567---878899989999997630357761689997568999 Q ss_pred HHHHHCCCCCCEEEECCCCCC Q ss_conf 566410245747997183223 Q gi|254780401|r 126 GVQMLLQEGVDIIIMDDGFHS 146 (338) Q Consensus 126 ~~~~~~~~~~diiIlDDGfQh 146 (338) +..++....+..+|++-|+-+ T Consensus 117 al~~A~~~~v~~li~~~g~~~ 137 (302) T d1thta_ 117 AYEVISDLELSFLITAVGVVN 137 (302) T ss_dssp HHHHTTTSCCSEEEEESCCSC T ss_pred HHHHHCCCCCCEEEEECCCCC T ss_conf 999824302223676324423 No 109 >d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]} Probab=52.58 E-value=6.4 Score=16.84 Aligned_cols=31 Identities=19% Similarity=0.186 Sum_probs=24.9 Q ss_pred EEECCCCCCHHHHHHHHHHHHCCCCEEEEEECC Q ss_conf 000788874899999999852473159876045 Q gi|254780401|r 52 FVMGGTGKTPTALAIAKAVIDKNLKPGFLSRGY 84 (338) Q Consensus 52 itvGGtGKTP~v~~l~~~l~~~g~~~~ilsRGY 84 (338) +.+||||- +=-+|++.|.++|+.+..++|-. T Consensus 5 lItGasGf--iG~~l~~~L~~~g~~Vi~~~r~~ 35 (281) T d1vl0a_ 5 LITGANGQ--LGREIQKQLKGKNVEVIPTDVQD 35 (281) T ss_dssp EEESTTSH--HHHHHHHHHTTSSEEEEEECTTT T ss_pred EEECCCCH--HHHHHHHHHHHCCCEEEEEECHH T ss_conf 99799988--99999999986889899920412 No 110 >d1x6va3 c.37.1.4 (A:34-228) Adenosine-5'phosphosulfate kinase (APS kinase) {Human (Homo sapiens) [TaxId: 9606]} Probab=52.48 E-value=2.2 Score=20.09 Aligned_cols=30 Identities=20% Similarity=0.289 Sum_probs=24.4 Q ss_pred CCCCCCHHHHHHHHHHHHCCCCEEEEEECC Q ss_conf 788874899999999852473159876045 Q gi|254780401|r 55 GGTGKTPTALAIAKAVIDKNLKPGFLSRGY 84 (338) Q Consensus 55 GGtGKTP~v~~l~~~l~~~g~~~~ilsRGY 84 (338) =|+|||-++..|++.|...+.....+..-+ T Consensus 28 pGSGKTTiAk~La~~l~~~~~~~~~~~~d~ 57 (195) T d1x6va3 28 SGAGKTTVSMALEEYLVCHGIPCYTLDGDN 57 (195) T ss_dssp CHHHHHHHHHHHHHHHHHTTCCEEEECHHH T ss_pred CCCCHHHHHHHHHHHHHHCCCCCCCHHHHH T ss_conf 999999999999999974479731000776 No 111 >d1sxje2 c.37.1.20 (E:4-255) Replication factor C5 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Probab=52.30 E-value=6.5 Score=16.81 Aligned_cols=27 Identities=22% Similarity=0.470 Sum_probs=21.3 Q ss_pred CEEEECCEEECCCCCCHHHHHHHHHHHHCC Q ss_conf 889982300078887489999999985247 Q gi|254780401|r 45 PVICVGGFVMGGTGKTPTALAIAKAVIDKN 74 (338) Q Consensus 45 pVI~VGNitvGGtGKTP~v~~l~~~l~~~g 74 (338) .++-.| -.|||||-++..+++.+...+ T Consensus 35 ~lll~G---p~G~GKTt~~~~la~~l~~~~ 61 (252) T d1sxje2 35 HLLLYG---PNGTGKKTRCMALLESIFGPG 61 (252) T ss_dssp CEEEEC---STTSSHHHHHHTHHHHHSCTT T ss_pred EEEEEC---CCCCCHHHHHHHHHHHHCCCC T ss_conf 599889---999988999999997622764 No 112 >d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]} Probab=52.15 E-value=6.2 Score=16.95 Aligned_cols=29 Identities=28% Similarity=0.686 Sum_probs=23.1 Q ss_pred EEECCCCCCHHHHHHHHHHHHCCC--CEEEEEE Q ss_conf 000788874899999999852473--1598760 Q gi|254780401|r 52 FVMGGTGKTPTALAIAKAVIDKNL--KPGFLSR 82 (338) Q Consensus 52 itvGGtGKTP~v~~l~~~l~~~g~--~~~ilsR 82 (338) +.+||||- +=.+|++.|.++|+ ++.+++| T Consensus 18 lItGaTG~--iG~~l~~~Ll~~g~~~~v~~~~R 48 (232) T d2bkaa1 18 FILGASGE--TGRVLLKEILEQGLFSKVTLIGR 48 (232) T ss_dssp EEECTTSH--HHHHHHHHHHHHTCCSEEEEEES T ss_pred EEECCCCH--HHHHHHHHHHHCCCCCEEEEEEC T ss_conf 99889838--99999999996799877999866 No 113 >d1sxjc2 c.37.1.20 (C:12-238) Replication factor C3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Probab=51.67 E-value=2.3 Score=20.03 Aligned_cols=28 Identities=39% Similarity=0.611 Sum_probs=21.3 Q ss_pred EEEECCEEECCCCCCHHHHHHHHHHHHCCCC Q ss_conf 8998230007888748999999998524731 Q gi|254780401|r 46 VICVGGFVMGGTGKTPTALAIAKAVIDKNLK 76 (338) Q Consensus 46 VI~VGNitvGGtGKTP~v~~l~~~l~~~g~~ 76 (338) ++-.|. -|+|||-++..+++.+...++. T Consensus 38 lLl~Gp---~G~GKttl~~~la~~l~~~~~~ 65 (227) T d1sxjc2 38 LLFYGP---PGTGKTSTIVALAREIYGKNYS 65 (227) T ss_dssp EEEECS---SSSSHHHHHHHHHHHHHTTSHH T ss_pred EEEECC---CCCCHHHHHHHHHHHHHCCCCC T ss_conf 999889---9877558999999985167776 No 114 >d1ukza_ c.37.1.1 (A:) Uridylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Probab=51.00 E-value=4.4 Score=17.96 Aligned_cols=27 Identities=26% Similarity=0.305 Sum_probs=20.8 Q ss_pred CCCCEEEECCEEECCCCCCHHHHHHHHHH Q ss_conf 88988998230007888748999999998 Q gi|254780401|r 42 APIPVICVGGFVMGGTGKTPTALAIAKAV 70 (338) Q Consensus 42 ~~~pVI~VGNitvGGtGKTP~v~~l~~~l 70 (338) .++|||++ +=--|+|||-.+..|++.+ T Consensus 6 ~~~~iI~i--~GppGSGKsT~a~~La~~~ 32 (196) T d1ukza_ 6 DQVSVIFV--LGGPGAGKGTQCEKLVKDY 32 (196) T ss_dssp TTCEEEEE--ECSTTSSHHHHHHHHHHHS T ss_pred CCCCEEEE--ECCCCCCHHHHHHHHHHHH T ss_conf 99728999--8999999899999999985 No 115 >d1e9ra_ c.37.1.11 (A:) Bacterial conjugative coupling protein TrwB {Escherichia coli [TaxId: 562]} Probab=50.76 E-value=5.5 Score=17.31 Aligned_cols=33 Identities=18% Similarity=0.213 Sum_probs=25.6 Q ss_pred EEEECCEEECCCCCCHHHHHHHHHHHHCCCCEEEEE Q ss_conf 899823000788874899999999852473159876 Q gi|254780401|r 46 VICVGGFVMGGTGKTPTALAIAKAVIDKNLKPGFLS 81 (338) Q Consensus 46 VI~VGNitvGGtGKTP~v~~l~~~l~~~g~~~~ils 81 (338) ++.+|. =|+|||-+...++..+..+|..+.|+- T Consensus 53 ~~I~G~---tGsGKT~~l~~li~~~~~~g~~~iiiD 85 (433) T d1e9ra_ 53 LLVNGA---TGTGKSVLLRELAYTGLLRGDRMVIVD 85 (433) T ss_dssp EEEEEC---TTSSHHHHHHHHHHHHHHTTCEEEEEE T ss_pred EEEEEC---CCCCHHHHHHHHHHHHHHCCCCEEEEE T ss_conf 899907---999689999999999984799889996 No 116 >d1iqpa2 c.37.1.20 (A:2-232) Replication factor C {Archaeon Pyrococcus furiosus [TaxId: 2261]} Probab=50.75 E-value=2.6 Score=19.67 Aligned_cols=26 Identities=38% Similarity=0.661 Sum_probs=19.1 Q ss_pred EEEECCEEECCCCCCHHHHHHHHHHHHCC Q ss_conf 89982300078887489999999985247 Q gi|254780401|r 46 VICVGGFVMGGTGKTPTALAIAKAVIDKN 74 (338) Q Consensus 46 VI~VGNitvGGtGKTP~v~~l~~~l~~~g 74 (338) ++-.|. =|+|||-++..+++.+.... T Consensus 48 lll~Gp---~G~GKTtla~~iak~l~~~~ 73 (231) T d1iqpa2 48 LLFAGP---PGVGKTTAALALARELFGEN 73 (231) T ss_dssp EEEESC---TTSSHHHHHHHHHHHHHGGG T ss_pred EEEECC---CCCCHHHHHHHHHHHHHHCC T ss_conf 999789---99748799999999987314 No 117 >d1mo6a1 c.37.1.11 (A:1-269) RecA protein, ATPase-domain {Mycobacterium tuberculosis [TaxId: 1773]} Probab=50.41 E-value=5.7 Score=17.21 Aligned_cols=26 Identities=23% Similarity=0.276 Sum_probs=21.8 Q ss_pred CCCCCHHHHHHHHHHHHCCCCEEEEE Q ss_conf 88874899999999852473159876 Q gi|254780401|r 56 GTGKTPTALAIAKAVIDKNLKPGFLS 81 (338) Q Consensus 56 GtGKTP~v~~l~~~l~~~g~~~~ils 81 (338) |+|||-+++.++...++.|..++.+. T Consensus 70 ~~GKT~l~l~~~~~~q~~g~~~vyID 95 (269) T d1mo6a1 70 SSGKTTVALHAVANAQAAGGVAAFID 95 (269) T ss_dssp SSSHHHHHHHHHHHHHHTTCEEEEEE T ss_pred CCHHHHHHHHHHHHHHCCCCEEEEEE T ss_conf 74889999999998754898899998 No 118 >d1qfja2 c.25.1.1 (A:98-232) NAD(P)H:flavin oxidoreductase {Escherichia coli [TaxId: 562]} Probab=50.07 E-value=5.4 Score=17.36 Aligned_cols=28 Identities=25% Similarity=0.374 Sum_probs=20.7 Q ss_pred CCCCEEEECCEEECCCCCCHHHHHHHHHHHHC Q ss_conf 88988998230007888748999999998524 Q gi|254780401|r 42 APIPVICVGGFVMGGTGKTPTALAIAKAVIDK 73 (338) Q Consensus 42 ~~~pVI~VGNitvGGtGKTP~v~~l~~~l~~~ 73 (338) ..-|+|.| .||||=||+...|-..+... T Consensus 4 ~~rplv~I----agGtGiaP~~s~l~~~~~~~ 31 (135) T d1qfja2 4 EERPMILI----AGGTGFSYARSILLTALARN 31 (135) T ss_dssp SSSCEEEE----EETTCHHHHHHHHHHHHHHC T ss_pred CCCCEEEE----ECCEEHHHHHHHHHHHHHCC T ss_conf 99989999----88625999999999999706 No 119 >d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Probab=50.05 E-value=7 Score=16.57 Aligned_cols=30 Identities=17% Similarity=0.010 Sum_probs=23.9 Q ss_pred EEECCCCCCHHHHHHHHHHHHCCCCEEEEEEC Q ss_conf 00078887489999999985247315987604 Q gi|254780401|r 52 FVMGGTGKTPTALAIAKAVIDKNLKPGFLSRG 83 (338) Q Consensus 52 itvGGtGKTP~v~~l~~~l~~~g~~~~ilsRG 83 (338) |++|||| =+=.+|++.|.++|++|.++.|. T Consensus 19 LVTGgsG--fIGs~lv~~L~~~g~~V~~~d~~ 48 (363) T d2c5aa1 19 SITGAGG--FIASHIARRLKHEGHYVIASDWK 48 (363) T ss_dssp EEETTTS--HHHHHHHHHHHHTTCEEEEEESS T ss_pred EEECCCC--HHHHHHHHHHHHCCCEEEEEECC T ss_conf 9978887--89999999999782989999689 No 120 >d1ixsb2 c.37.1.20 (B:4-242) Holliday junction helicase RuvB {Thermus thermophilus [TaxId: 274]} Probab=49.91 E-value=7 Score=16.55 Aligned_cols=34 Identities=26% Similarity=0.248 Sum_probs=23.9 Q ss_pred CCCCEEEECCEEECCCCCCHHHHHHHHHHHHCCCCEEEEE Q ss_conf 8898899823000788874899999999852473159876 Q gi|254780401|r 42 APIPVICVGGFVMGGTGKTPTALAIAKAVIDKNLKPGFLS 81 (338) Q Consensus 42 ~~~pVI~VGNitvGGtGKTP~v~~l~~~l~~~g~~~~ils 81 (338) .+-.++-.|.= |||||-++.++++.+ ++....+| T Consensus 34 ~~~~~Ll~GPp---G~GKTtla~~la~~~---~~~~~~~~ 67 (239) T d1ixsb2 34 PLEHLLLFGPP---GLGKTTLAHVIAHEL---GVNLRVTS 67 (239) T ss_dssp CCCCEEEECCT---TSCHHHHHHHHHHHH---TCCEEEEE T ss_pred CCCEEEEECCC---CCCHHHHHHHHHHHH---CCCEEECC T ss_conf 88738988979---987888999999984---98747546 No 121 >d1svsa1 c.37.1.8 (A:32-60,A:182-347) Transducin (alpha subunit) {Rat (Rattus norvegicus) [TaxId: 10116]} Probab=49.91 E-value=3.6 Score=18.66 Aligned_cols=21 Identities=19% Similarity=0.517 Sum_probs=15.8 Q ss_pred CCEEEECCEEECCCCCCHHHHHHH Q ss_conf 988998230007888748999999 Q gi|254780401|r 44 IPVICVGGFVMGGTGKTPTALAIA 67 (338) Q Consensus 44 ~pVI~VGNitvGGtGKTP~v~~l~ 67 (338) +.|+.||. ||+|||-++..+. T Consensus 3 ~KivllG~---~~vGKTsl~~r~~ 23 (195) T d1svsa1 3 VKLLLLGA---GESGKSTIVKQMK 23 (195) T ss_dssp EEEEEECS---TTSSHHHHHHHHH T ss_pred EEEEEECC---CCCCHHHHHHHHH T ss_conf 69999999---9988899999884 No 122 >d1w44a_ c.37.1.11 (A:) NTPase P4 {Bacteriophage phi-12 [TaxId: 161736]} Probab=49.74 E-value=3.2 Score=18.93 Aligned_cols=25 Identities=32% Similarity=0.526 Sum_probs=18.5 Q ss_pred EECCEEE---CCCCCCHHHHHHHHHHHH Q ss_conf 9823000---788874899999999852 Q gi|254780401|r 48 CVGGFVM---GGTGKTPTALAIAKAVID 72 (338) Q Consensus 48 ~VGNitv---GGtGKTP~v~~l~~~l~~ 72 (338) .=||+.+ -|||||.++..||..+.. T Consensus 122 ~~g~~l~~G~pG~GKT~la~ala~~~~~ 149 (321) T d1w44a_ 122 ASGMVIVTGKGNSGKTPLVHALGEALGG 149 (321) T ss_dssp ESEEEEEECSSSSCHHHHHHHHHHHHHT T ss_pred CCCEEEEECCCCCCHHHHHHHHHHHHCC T ss_conf 8863888779985088999999998637 No 123 >d2d00a1 c.149.1.1 (A:6-109) V-type ATP synthase subunit F, AtpF {Thermus thermophilus [TaxId: 274]} Probab=49.60 E-value=6.9 Score=16.61 Aligned_cols=55 Identities=18% Similarity=0.224 Sum_probs=33.1 Q ss_pred ECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHH-HHCC-CEEEECHHHHHHCCCC Q ss_conf 41553578999887401000012214332348989999999975-6479-8799854663438233 Q gi|254780401|r 229 SGIADTEKFFTTVRQLGALIEQCYSFGDHAHLSDKKIAYLLDQA-QQKG-LILVTTAKDAMRLHKR 292 (338) Q Consensus 229 sGIa~P~~F~~~L~~~g~~i~~~~~fpDHh~ys~~dl~~i~~~a-~~~~-~~iiTTEKD~VKL~~~ 292 (338) +=||+++.- - |+....--.|+.| +.+++.+-+++. ...+ ..|+.||..+-++++. T Consensus 2 aViGd~dtv-~-----GFrLaGi~~~~v~---~~ee~~~~l~~l~~~~d~gII~Ite~~~~~i~~~ 58 (104) T d2d00a1 2 AVIADPETA-Q-----GFRLAGLEGYGAS---SAEEAQSLLETLVERGGYALVAVDEALLPDPERA 58 (104) T ss_dssp EEEECHHHH-H-----HHHHTTSEEEECS---SHHHHHHHHHHHHHHCCCSEEEEETTTCSCHHHH T ss_pred EEECCHHHH-H-----HHHHCCCEEECCC---CHHHHHHHHHHHHHCCCEEEEEECHHHHHHHHHH T ss_conf 798188889-9-----9998298005379---9899999999997479958999838998765999 No 124 >d1ixza_ c.37.1.20 (A:) AAA domain of cell division protein FtsH {Thermus thermophilus [TaxId: 274]} Probab=49.58 E-value=5.1 Score=17.54 Aligned_cols=33 Identities=36% Similarity=0.292 Sum_probs=21.9 Q ss_pred CCCEEEECCEEECCCCCCHHHHHHHHHHHHCCCCEEEEE Q ss_conf 898899823000788874899999999852473159876 Q gi|254780401|r 43 PIPVICVGGFVMGGTGKTPTALAIAKAVIDKNLKPGFLS 81 (338) Q Consensus 43 ~~pVI~VGNitvGGtGKTP~v~~l~~~l~~~g~~~~ils 81 (338) |--|+-.|.- |||||-++.++++.+ |.....++ T Consensus 42 ~~giLl~Gpp---GtGKT~la~aia~~~---~~~~~~i~ 74 (247) T d1ixza_ 42 PKGVLLVGPP---GVGKTHLARAVAGEA---RVPFITAS 74 (247) T ss_dssp CSEEEEECCT---TSSHHHHHHHHHHHT---TCCEEEEE T ss_pred CCEEEEECCC---CCCHHHHHHHHHHHC---CCCEEEEE T ss_conf 8648876689---888359999999873---99779978 No 125 >d2ftsa3 c.57.1.2 (A:499-653) Gephyrin, domain 5 {Rat (Rattus norvegicus) [TaxId: 10116]} Probab=49.58 E-value=7.1 Score=16.52 Aligned_cols=19 Identities=11% Similarity=0.092 Sum_probs=10.8 Q ss_pred EEEECCCCHHHHHHHHHHH Q ss_conf 9874155357899988740 Q gi|254780401|r 226 LAFSGIADTEKFFTTVRQL 244 (338) Q Consensus 226 ~afsGIa~P~~F~~~L~~~ 244 (338) ..|+==|+|..-+-.++.+ T Consensus 122 ~v~~LPG~P~a~~~~~~~~ 140 (155) T d2ftsa3 122 IIFALPGNPVSAVVTCNLF 140 (155) T ss_dssp EEEEECSSHHHHHHHHHHH T ss_pred EEEECCCCCHHHHHHHHHH T ss_conf 5897799809999999999 No 126 >d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]} Probab=49.46 E-value=7.1 Score=16.51 Aligned_cols=32 Identities=16% Similarity=0.291 Sum_probs=26.3 Q ss_pred EEECCCCCCHHHHHHHHHHHHCCCCEEEEEEC Q ss_conf 00078887489999999985247315987604 Q gi|254780401|r 52 FVMGGTGKTPTALAIAKAVIDKNLKPGFLSRG 83 (338) Q Consensus 52 itvGGtGKTP~v~~l~~~l~~~g~~~~ilsRG 83 (338) |.+||+|-.=+=..+|+.|.++|.+|++.+|. T Consensus 9 lITGaag~~GIG~AiA~~la~~Ga~V~i~~r~ 40 (274) T d2pd4a1 9 LIVGVANNKSIAYGIAQSCFNQGATLAFTYLN 40 (274) T ss_dssp EEECCCSTTSHHHHHHHHHHTTTCEEEEEESS T ss_pred EEECCCCCCHHHHHHHHHHHHCCCEEEEEECC T ss_conf 99799998389999999999879999999688 No 127 >d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]} Probab=48.95 E-value=7.3 Score=16.45 Aligned_cols=33 Identities=9% Similarity=0.217 Sum_probs=25.4 Q ss_pred EEECCCCCCHHHHHHHHHHHHCCCCEEEEEECCCC Q ss_conf 00078887489999999985247315987604578 Q gi|254780401|r 52 FVMGGTGKTPTALAIAKAVIDKNLKPGFLSRGYGR 86 (338) Q Consensus 52 itvGGtGKTP~v~~l~~~l~~~g~~~~ilsRGYg~ 86 (338) |.+|||| -+=.+|++.|.++|++|..+.|-+.+ T Consensus 5 lVtG~sG--fiG~~lv~~L~~~g~~V~~~d~~~~~ 37 (312) T d2b69a1 5 LITGGAG--FVGSHLTDKLMMDGHEVTVVDNFFTG 37 (312) T ss_dssp EEETTTS--HHHHHHHHHHHHTTCEEEEEECCSSC T ss_pred EEECCCC--HHHHHHHHHHHHCCCEEEEEECCCCC T ss_conf 9978973--89999999999786989999688767 No 128 >d1gvnb_ c.37.1.21 (B:) Plasmid maintenance system epsilon/zeta, toxin zeta subunit {Streptococcus pyogenes [TaxId: 1314]} Probab=48.76 E-value=3.6 Score=18.61 Aligned_cols=30 Identities=23% Similarity=0.177 Sum_probs=19.8 Q ss_pred EEEECCEEECCCCCCHHHHHHHHHHHHCCCCEEEEE Q ss_conf 899823000788874899999999852473159876 Q gi|254780401|r 46 VICVGGFVMGGTGKTPTALAIAKAVIDKNLKPGFLS 81 (338) Q Consensus 46 VI~VGNitvGGtGKTP~v~~l~~~l~~~g~~~~ils 81 (338) |+-+|- =|||||-++..||+.+. ..+.+++ T Consensus 35 ilL~Gp---PGtGKT~la~~la~~~~---~~~~~i~ 64 (273) T d1gvnb_ 35 FLLGGQ---PGSGKTSLRSAIFEETQ---GNVIVID 64 (273) T ss_dssp EEEECC---TTSCTHHHHHHHHHHTT---TCCEEEC T ss_pred EEEECC---CCCCHHHHHHHHHHHHH---CCEEEEE T ss_conf 998897---99889999999999865---1548983 No 129 >d1d1qa_ c.44.1.1 (A:) Tyrosine phosphatase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Probab=48.52 E-value=4.8 Score=17.76 Aligned_cols=40 Identities=33% Similarity=0.455 Sum_probs=28.5 Q ss_pred CCCCCEEEECCEEECCCCCCHHHHHHHHHHHHC-CCC---EEEEEECCC Q ss_conf 388988998230007888748999999998524-731---598760457 Q gi|254780401|r 41 HAPIPVICVGGFVMGGTGKTPTALAIAKAVIDK-NLK---PGFLSRGYG 85 (338) Q Consensus 41 ~~~~pVI~VGNitvGGtGKTP~v~~l~~~l~~~-g~~---~~ilsRGYg 85 (338) +..|-.||.||+ .-.||+.++.+.+... |.. +.+-|.|=. T Consensus 5 k~~ILFVCtgN~-----cRSpmAEai~~~~~~~~~l~~~~~~v~SAG~~ 48 (159) T d1d1qa_ 5 KISVAFIALGNF-----CRSPMAEAIFKHEVEKANLENRFNKIDSFGTS 48 (159) T ss_dssp CEEEEEEESSSS-----SHHHHHHHHHHHHHHHTTCGGGEEEEEEEESS T ss_pred CCEEEEEECCHH-----HHHHHHHHHHHHHHHHCCCCCCEEEEEECCCC T ss_conf 757999808727-----58999999999999866998885899952443 No 130 >d1vhta_ c.37.1.1 (A:) Dephospho-CoA kinase {Escherichia coli [TaxId: 562]} Probab=48.49 E-value=5.2 Score=17.50 Aligned_cols=25 Identities=32% Similarity=0.683 Sum_probs=17.2 Q ss_pred EE-EECCEEECCCCCCHHHHHHHHHHHHCCCCE Q ss_conf 89-982300078887489999999985247315 Q gi|254780401|r 46 VI-CVGGFVMGGTGKTPTALAIAKAVIDKNLKP 77 (338) Q Consensus 46 VI-~VGNitvGGtGKTP~v~~l~~~l~~~g~~~ 77 (338) || ..|++ |+|||- ++++|++.|+.+ T Consensus 5 iIgitG~i---gSGKSt----v~~~l~~~G~~v 30 (208) T d1vhta_ 5 IVALTGGI---GSGKST----VANAFADLGINV 30 (208) T ss_dssp EEEEECCT---TSCHHH----HHHHHHHTTCEE T ss_pred EEEEECCC---CCCHHH----HHHHHHHCCCCE T ss_conf 99978988---688999----999999879919 No 131 >d1fnda2 c.25.1.1 (A:155-314) Ferredoxin reductase (flavodoxin reductase) {Spinach (Spinacia oleracea) [TaxId: 3562]} Probab=48.18 E-value=5 Score=17.58 Aligned_cols=28 Identities=25% Similarity=0.390 Sum_probs=21.9 Q ss_pred CCCCCEEEECCEEECCCCCCHHHHHHHHHHHH Q ss_conf 38898899823000788874899999999852 Q gi|254780401|r 41 HAPIPVICVGGFVMGGTGKTPTALAIAKAVID 72 (338) Q Consensus 41 ~~~~pVI~VGNitvGGtGKTP~v~~l~~~l~~ 72 (338) ..+.|+|.|| ||||=||+.-.|-..+.. T Consensus 6 d~~~plilIa----~GtGIaP~~s~l~~~~~~ 33 (160) T d1fnda2 6 DPNATIIMLG----TGTGIAPFRSFLWKMFFE 33 (160) T ss_dssp CTTCEEEEEE----EGGGGHHHHHHHHHHHSC T ss_pred CCCCCEEEEE----CCHHHHHHHHHHHHHHHH T ss_conf 9999989997----750489999999999983 No 132 >d1tf7a1 c.37.1.11 (A:14-255) Circadian clock protein KaiC {Synechococcus sp. strain PCC 7942 (Anacystis nidulans R2) [TaxId: 1140]} Probab=48.07 E-value=6.3 Score=16.87 Aligned_cols=29 Identities=24% Similarity=0.342 Sum_probs=20.9 Q ss_pred CCCCCCHHHHH-HHHHHHHCCCCEEEEEEC Q ss_conf 78887489999-999985247315987604 Q gi|254780401|r 55 GGTGKTPTALA-IAKAVIDKNLKPGFLSRG 83 (338) Q Consensus 55 GGtGKTP~v~~-l~~~l~~~g~~~~ilsRG 83 (338) -|+|||-++.. +++.+...+.++..+|-. T Consensus 35 ~G~GKT~la~~~~~~~~~~~~~~~~~~s~e 64 (242) T d1tf7a1 35 SGTGKTLFSIQFLYNGIIEFDEPGVFVTFE 64 (242) T ss_dssp TTSSHHHHHHHHHHHHHHHHCCCEEEEESS T ss_pred CCCCHHHHHHHHHHHHHHHCCCCCCCCCCC T ss_conf 999999999999999998568874201266 No 133 >d1di6a_ c.57.1.1 (A:) MogA {Escherichia coli [TaxId: 562]} Probab=47.97 E-value=4.1 Score=18.19 Aligned_cols=21 Identities=10% Similarity=0.107 Sum_probs=15.3 Q ss_pred EEEEEECCCCHHHHHHHHHHH Q ss_conf 389874155357899988740 Q gi|254780401|r 224 KVLAFSGIADTEKFFTTVRQL 244 (338) Q Consensus 224 ~v~afsGIa~P~~F~~~L~~~ 244 (338) +-+.||==|+|......|+-. T Consensus 125 ~tlI~nLPGsp~av~~~le~I 145 (190) T d1di6a_ 125 QALILNLPGQPKSIKETLEGV 145 (190) T ss_dssp TEEEEEECSSHHHHHHHHHEE T ss_pred CEEEEECCCCHHHHHHHHHHH T ss_conf 989998799879999999998 No 134 >d1t6na_ c.37.1.19 (A:) Spliceosome RNA helicase BAT1 (UAP56) {Human (Homo sapiens) [TaxId: 9606]} Probab=47.71 E-value=7.6 Score=16.32 Aligned_cols=96 Identities=11% Similarity=0.126 Sum_probs=42.4 Q ss_pred CCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCEEEECCCCCHHHHCCHHHHHHHCCC-----CCCCCCH-HHHHH Q ss_conf 78887489999999985247315987604578777755871456788770421233220576-----3465201-22566 Q gi|254780401|r 55 GGTGKTPTALAIAKAVIDKNLKPGFLSRGYGRKSRISFRVDLEKHSAYDVGDEPLLLARRAV-----TIVTSDR-KIGVQ 128 (338) Q Consensus 55 GGtGKTP~v~~l~~~l~~~g~~~~ilsRGYg~~~~~~~~v~~~~~~~~~vGDEp~lla~~~p-----v~V~~~R-~~~~~ 128 (338) =|||||- .|+.-.+..... . ........+.+....+.++.++...+....+ ++++... ..... T Consensus 47 TGsGKTl--a~~lp~l~~~~~-------~--~~~~~~lil~PtreL~~qi~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 115 (207) T d1t6na_ 47 SGMGKTA--VFVLATLQQLEP-------V--TGQVSVLVMCHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEE 115 (207) T ss_dssp TTSCHHH--HHHHHHHHHCCC-------C--TTCCCEEEECSCHHHHHHHHHHHHHHTTTSTTCCEEEESCCSCHHHHHH T ss_pred CCCCCCC--CCCCCEEEEECC-------C--CCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHH T ss_conf 3332120--013440321024-------6--7786289985122036789999999984388751678845654889999 Q ss_pred HHCCCCCCEEEECCC-----CCCCCC-CCEEEEEEECCC Q ss_conf 410245747997183-----223441-230699996184 Q gi|254780401|r 129 MLLQEGVDIIIMDDG-----FHSADL-QADFSLIVVNSH 161 (338) Q Consensus 129 ~~~~~~~diiIlDDG-----fQh~~l-~rdl~Ivl~d~~ 161 (338) .+.+.++|++|.-=| ++...+ -+++..+++|.- T Consensus 116 ~l~~~~~~ilI~TP~rl~~~~~~~~~~l~~l~~lVlDEa 154 (207) T d1t6na_ 116 VLKKNCPHIVVGTPGRILALARNKSLNLKHIKHFILDEC 154 (207) T ss_dssp HHHHSCCSEEEECHHHHHHHHHTTSSCCTTCCEEEEESH T ss_pred HHHHCCCCEEEECCCHHHHHCCCCCEECCCCCEEEHHHH T ss_conf 987368998990854643202588255430303402344 No 135 >d1u7pa_ c.108.1.17 (A:) Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mus musculus) [TaxId: 10090]} Probab=47.25 E-value=7.7 Score=16.28 Aligned_cols=40 Identities=18% Similarity=0.211 Sum_probs=27.6 Q ss_pred CCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCC Q ss_conf 155357899988740100001221433234898999999997564798 Q gi|254780401|r 230 GIADTEKFFTTVRQLGALIEQCYSFGDHAHLSDKKIAYLLDQAQQKGL 277 (338) Q Consensus 230 GIa~P~~F~~~L~~~g~~i~~~~~fpDHh~ys~~dl~~i~~~a~~~~~ 277 (338) .=.+|+.|...++.+|+...+.+.+-|. ..|++. |++.+. T Consensus 97 ~kp~~~~~~~~~~~~~~~~~~~l~igD~----~~di~a----A~~aG~ 136 (164) T d1u7pa_ 97 PGSKVTHFERLHHKTGVPFSQMVFFDDE----NRNIID----VGRLGV 136 (164) T ss_dssp SSCHHHHHHHHHHHHCCCGGGEEEEESC----HHHHHH----HHTTTC T ss_pred CCCCHHHHHHHHHHHCCCHHHEEEECCC----HHHHHH----HHHCCC T ss_conf 6897699999999968886997987487----878999----998699 No 136 >d1fdra2 c.25.1.1 (A:101-248) Ferredoxin reductase (flavodoxin reductase) {Escherichia coli [TaxId: 562]} Probab=47.12 E-value=3.1 Score=19.07 Aligned_cols=21 Identities=19% Similarity=0.121 Sum_probs=14.7 Q ss_pred EECCCCCCHHHHHHHHHHHHCC Q ss_conf 0078887489999999985247 Q gi|254780401|r 53 VMGGTGKTPTALAIAKAVIDKN 74 (338) Q Consensus 53 tvGGtGKTP~v~~l~~~l~~~g 74 (338) ..||||=||+...|-. +...+ T Consensus 12 Ia~GtGiaP~~s~l~~-~~~~~ 32 (148) T d1fdra2 12 LATGTAIGPYLSILRL-GKDLD 32 (148) T ss_dssp EEEGGGGHHHHHHHHH-CCSCT T ss_pred EECCEEHHHHHHHHHH-HHHHC T ss_conf 9767579999999999-99837 No 137 >d1rkba_ c.37.1.1 (A:) Adenylate kinase {Human (Homo sapiens), isoenzyme 6 [TaxId: 9606]} Probab=47.10 E-value=3.8 Score=18.46 Aligned_cols=16 Identities=31% Similarity=0.385 Sum_probs=13.5 Q ss_pred CCCCCCHHHHHHHHHH Q ss_conf 7888748999999998 Q gi|254780401|r 55 GGTGKTPTALAIAKAV 70 (338) Q Consensus 55 GGtGKTP~v~~l~~~l 70 (338) -|||||-++..|++.| T Consensus 13 pGsGKTTia~~La~~l 28 (173) T d1rkba_ 13 PGVGKTTLGKELASKS 28 (173) T ss_dssp TTSSHHHHHHHHHHHH T ss_pred CCCCHHHHHHHHHHHH T ss_conf 9999899999999997 No 138 >d1sxjb2 c.37.1.20 (B:7-230) Replication factor C4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Probab=46.71 E-value=2.9 Score=19.24 Aligned_cols=21 Identities=24% Similarity=0.514 Sum_probs=17.4 Q ss_pred CCCCCHHHHHHHHHHHHCCCC Q ss_conf 888748999999998524731 Q gi|254780401|r 56 GTGKTPTALAIAKAVIDKNLK 76 (338) Q Consensus 56 GtGKTP~v~~l~~~l~~~g~~ 76 (338) |+|||-++..+++.+...... T Consensus 46 G~GKTt~a~~la~~l~~~~~~ 66 (224) T d1sxjb2 46 GIGKTTSVHCLAHELLGRSYA 66 (224) T ss_dssp TSSHHHHHHHHHHHHHGGGHH T ss_pred CCCCHHHHHHHHHHHHCCCCC T ss_conf 987054699999997256643 No 139 >d1pn3a_ c.87.1.5 (A:) TDP-epi-vancosaminyltransferase GtfA {Amycolatopsis orientalis [TaxId: 31958]} Probab=46.53 E-value=6.8 Score=16.64 Aligned_cols=32 Identities=16% Similarity=0.114 Sum_probs=24.4 Q ss_pred EECCC-CCCHHHHHHHHHHHHCCCCEEEEEECC Q ss_conf 00788-874899999999852473159876045 Q gi|254780401|r 53 VMGGT-GKTPTALAIAKAVIDKNLKPGFLSRGY 84 (338) Q Consensus 53 tvGGt-GKTP~v~~l~~~l~~~g~~~~ilsRGY 84 (338) +.||| |-.==.+.||+.|.++|+.|.+++-+. T Consensus 6 ~~~gt~Ghi~P~laLA~~L~~rGh~V~~~~~~~ 38 (391) T d1pn3a_ 6 TGCGSRGDTEPLVALAARLRELGADARMCLPPD 38 (391) T ss_dssp EEESSHHHHHHHHHHHHHHHHTTCEEEEEECGG T ss_pred ECCCCHHHHHHHHHHHHHHHHCCCEEEEEECHH T ss_conf 858873689999999999998899899997803 No 140 >d1umka2 c.25.1.1 (A:154-300) cytochrome b5 reductase {Human (Homo sapiens) [TaxId: 9606]} Probab=46.32 E-value=4.4 Score=18.00 Aligned_cols=33 Identities=27% Similarity=0.359 Sum_probs=21.9 Q ss_pred CCCCEEEECCE--EECCCCCCHHHHHHHHHHHHCC Q ss_conf 88988998230--0078887489999999985247 Q gi|254780401|r 42 APIPVICVGGF--VMGGTGKTPTALAIAKAVIDKN 74 (338) Q Consensus 42 ~~~pVI~VGNi--tvGGtGKTP~v~~l~~~l~~~g 74 (338) ++..+=.+-+| .+||||=||+...|-..+.+.+ T Consensus 11 ~~~~~~~~k~i~lIagGtGItP~~s~l~~~l~~~~ 45 (147) T d1umka2 11 SNPIIRTVKSVGMIAGGTGITPMLQVIRAIMKDPD 45 (147) T ss_dssp SCCEEEECSEEEEEEEGGGHHHHHHHHHHHHTCTT T ss_pred CCCCCCCCCEEEEEECCEECCHHHHHHHHHHHCCC T ss_conf 87531357769999788531658999999996689 No 141 >d1sxjd2 c.37.1.20 (D:26-262) Replication factor C2 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Probab=45.97 E-value=4 Score=18.26 Aligned_cols=25 Identities=40% Similarity=0.574 Sum_probs=18.5 Q ss_pred EEEECCEEECCCCCCHHHHHHHHHHHHC Q ss_conf 8998230007888748999999998524 Q gi|254780401|r 46 VICVGGFVMGGTGKTPTALAIAKAVIDK 73 (338) Q Consensus 46 VI~VGNitvGGtGKTP~v~~l~~~l~~~ 73 (338) ++-.|. -|+|||-++..+++.+... T Consensus 36 lll~Gp---~G~GKTtl~~~i~~~l~~~ 60 (237) T d1sxjd2 36 MLFYGP---PGTGKTSTILALTKELYGP 60 (237) T ss_dssp EEEECS---TTSSHHHHHHHHHHHHHHH T ss_pred EEEECC---CCCCHHHHHHHHHHHHCCC T ss_conf 999899---9998499999999997097 No 142 >d1r7ra3 c.37.1.20 (A:471-735) Membrane fusion ATPase VCP/p97 {Mouse (Mus musculus) [TaxId: 10090]} Probab=45.68 E-value=5.5 Score=17.28 Aligned_cols=33 Identities=30% Similarity=0.208 Sum_probs=22.6 Q ss_pred CCCEEEECCEEECCCCCCHHHHHHHHHHHHCCCCEEEEE Q ss_conf 898899823000788874899999999852473159876 Q gi|254780401|r 43 PIPVICVGGFVMGGTGKTPTALAIAKAVIDKNLKPGFLS 81 (338) Q Consensus 43 ~~pVI~VGNitvGGtGKTP~v~~l~~~l~~~g~~~~ils 81 (338) +.-|+-.| -=|||||-++.++|+.+ |.....++ T Consensus 41 ~~giLL~G---p~GtGKT~l~~ala~~~---~~~~~~~~ 73 (265) T d1r7ra3 41 SKGVLFYG---PPGCGKTLLAKAIANEC---QANFISIK 73 (265) T ss_dssp CCEEEEBC---CTTSSHHHHHHHHHHHT---TCEEEEEC T ss_pred CCEEEEEC---CCCCCCHHHHHHHHHHH---CCCEEEEE T ss_conf 87578878---99876304778878771---89479988 No 143 >d1uuya_ c.57.1.1 (A:) Plant CNX1 G domain {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Probab=45.55 E-value=4.1 Score=18.20 Aligned_cols=19 Identities=5% Similarity=0.025 Sum_probs=12.5 Q ss_pred EEEEECCCCHHHHHHHHHH Q ss_conf 8987415535789998874 Q gi|254780401|r 225 VLAFSGIADTEKFFTTVRQ 243 (338) Q Consensus 225 v~afsGIa~P~~F~~~L~~ 243 (338) -+.||==|+|......++- T Consensus 130 ~~if~LPG~P~a~~~~l~~ 148 (161) T d1uuya_ 130 TLIINMPGNPNAVAECMEA 148 (161) T ss_dssp EEEEEECSSTTHHHHHHHH T ss_pred EEEEECCCCHHHHHHHHHH T ss_conf 9999899997999999999 No 144 >d2r8ba1 c.69.1.14 (A:44-246) Uncharacterized protein Atu2452 {Agrobacterium tumefaciens [TaxId: 358]} Probab=45.20 E-value=8.2 Score=16.06 Aligned_cols=53 Identities=13% Similarity=0.151 Sum_probs=38.7 Q ss_pred CCEEEEEECCCC-------HHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHC Q ss_conf 863898741553-------578999887401000012214332348989999999975647 Q gi|254780401|r 222 GKKVLAFSGIAD-------TEKFFTTVRQLGALIEQCYSFGDHAHLSDKKIAYLLDQAQQK 275 (338) Q Consensus 222 ~k~v~afsGIa~-------P~~F~~~L~~~g~~i~~~~~fpDHh~ys~~dl~~i~~~a~~~ 275 (338) ...++.+.|--| -+++.+.|++.|..+ ..+.|+.-|.++..+++.+.+-..++ T Consensus 143 ~~~~~i~hG~~D~~vp~~~~~~~~~~L~~~g~~v-~~~~~~ggH~~~~~~~~~~~~wl~~~ 202 (203) T d2r8ba1 143 TRRVLITAGERDPICPVQLTKALEESLKAQGGTV-ETVWHPGGHEIRSGEIDAVRGFLAAY 202 (203) T ss_dssp TCEEEEEEETTCTTSCHHHHHHHHHHHHHHSSEE-EEEEESSCSSCCHHHHHHHHHHHGGG T ss_pred CCHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCE-EEEEECCCCCCCHHHHHHHHHHHHHC T ss_conf 3202115567898116999999999999789987-99998999868999999999999965 No 145 >d1d2na_ c.37.1.20 (A:) Hexamerization domain of N-ethylmalemide-sensitive fusion (NSF) protein {Chinese hamster (Cricetulus griseus) [TaxId: 10029]} Probab=44.94 E-value=4.3 Score=18.08 Aligned_cols=24 Identities=33% Similarity=0.285 Sum_probs=18.0 Q ss_pred CEEEECCEEECCCCCCHHHHHHHHHHH Q ss_conf 889982300078887489999999985 Q gi|254780401|r 45 PVICVGGFVMGGTGKTPTALAIAKAVI 71 (338) Q Consensus 45 pVI~VGNitvGGtGKTP~v~~l~~~l~ 71 (338) -|+-.|.- |||||-++..+|+.+. T Consensus 42 ~vLL~Gpp---GtGKT~la~alA~~~~ 65 (246) T d1d2na_ 42 SVLLEGPP---HSGKTALAAKIAEESN 65 (246) T ss_dssp EEEEECST---TSSHHHHHHHHHHHHT T ss_pred EEEEECCC---CCCHHHHHHHHHHCCC T ss_conf 79988969---9988999999862010 No 146 >d1jl3a_ c.44.1.1 (A:) Arsenate reductase ArsC {Bacillus subtilis [TaxId: 1423]} Probab=44.54 E-value=5.9 Score=17.07 Aligned_cols=34 Identities=24% Similarity=0.248 Sum_probs=24.4 Q ss_pred CCEEEECCEEECCCCCCHHHHHHHHHHHHCCCCEEEEEECC Q ss_conf 98899823000788874899999999852473159876045 Q gi|254780401|r 44 IPVICVGGFVMGGTGKTPTALAIAKAVIDKNLKPGFLSRGY 84 (338) Q Consensus 44 ~pVI~VGNitvGGtGKTP~v~~l~~~l~~~g~~~~ilsRGY 84 (338) |--||.||+ .-.||+..+++.+-. -+..+-|-|- T Consensus 4 ILFVC~gN~-----cRSpmAEai~~~~~~--~~~~~~Sag~ 37 (137) T d1jl3a_ 4 IYFLCTGNS-----CRSQMAEGWAKQYLG--DEWKVYSAGI 37 (137) T ss_dssp EEEEESSSS-----SHHHHHHHHHHHHSC--TTEEEEEEES T ss_pred EEEEECCCH-----HHHHHHHHHHHHHCC--CCEEECCCCC T ss_conf 999959872-----688999999998679--8765323123 No 147 >d1uf9a_ c.37.1.1 (A:) Dephospho-CoA kinase {Thermus thermophilus [TaxId: 274]} Probab=44.50 E-value=4.3 Score=18.09 Aligned_cols=19 Identities=21% Similarity=0.181 Sum_probs=12.7 Q ss_pred CCCCCCHHHHHHHHHHHHCCCCE Q ss_conf 78887489999999985247315 Q gi|254780401|r 55 GGTGKTPTALAIAKAVIDKNLKP 77 (338) Q Consensus 55 GGtGKTP~v~~l~~~l~~~g~~~ 77 (338) -|+|||-+ |++|++.|+.+ T Consensus 12 ~gSGKstv----a~~l~~~g~~~ 30 (191) T d1uf9a_ 12 IGSGKSTV----AALLRSWGYPV 30 (191) T ss_dssp TTSCHHHH----HHHHHHTTCCE T ss_pred CCCCHHHH----HHHHHHCCCEE T ss_conf 87789999----99999879909 No 148 >d1x94a_ c.80.1.3 (A:) Phosphoheptose isomerase GmhA1 {Vibrio cholerae [TaxId: 666]} Probab=44.24 E-value=8.5 Score=15.96 Aligned_cols=25 Identities=24% Similarity=0.412 Sum_probs=12.0 Q ss_pred HHHHHHHHCCC-EEEECHHHHHHCCC Q ss_conf 99997564798-79985466343823 Q gi|254780401|r 267 YLLDQAQQKGL-ILVTTAKDAMRLHK 291 (338) Q Consensus 267 ~i~~~a~~~~~-~iiTTEKD~VKL~~ 291 (338) ...+.|++.+. .+..|-++--+|.+ T Consensus 129 ~a~~~Ak~~g~~~i~it~~~~~~l~~ 154 (191) T d1x94a_ 129 KAIEAAKAKGMKTIALTGKDGGKMAG 154 (191) T ss_dssp HHHHHHHHHTCEEEEEEETTCGGGTT T ss_pred HHHHHHHHCCCEEEEEECCCCCCCCC T ss_conf 22799985797699995689984234 No 149 >d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Probab=44.12 E-value=8.5 Score=15.95 Aligned_cols=30 Identities=17% Similarity=0.169 Sum_probs=23.4 Q ss_pred EEECCCCCCHHHHHHHHHHHHCCCCEEEEEEC Q ss_conf 00078887489999999985247315987604 Q gi|254780401|r 52 FVMGGTGKTPTALAIAKAVIDKNLKPGFLSRG 83 (338) Q Consensus 52 itvGGtGKTP~v~~l~~~l~~~g~~~~ilsRG 83 (338) |++|||| -+--+|++.|.++|+.+-++.+. T Consensus 6 LVTGgtG--fIGs~lv~~L~~~g~~v~v~~~d 35 (346) T d1oc2a_ 6 IVTGGAG--FIGSNFVHYVYNNHPDVHVTVLD 35 (346) T ss_dssp EEETTTS--HHHHHHHHHHHHHCTTCEEEEEE T ss_pred EEECCCC--HHHHHHHHHHHHCCCCEEEEEEE T ss_conf 9918886--89999999999779974999984 No 150 >d2iw1a1 c.87.1.8 (A:2-371) Lipopolysaccharide core biosynthesis protein RfaG {Escherichia coli [TaxId: 562]} Probab=44.12 E-value=7.2 Score=16.49 Aligned_cols=33 Identities=15% Similarity=0.304 Sum_probs=26.7 Q ss_pred ECCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCC Q ss_conf 07888748999999998524731598760457877 Q gi|254780401|r 54 MGGTGKTPTALAIAKAVIDKNLKPGFLSRGYGRKS 88 (338) Q Consensus 54 vGGtGKTP~v~~l~~~l~~~g~~~~ilsRGYg~~~ 88 (338) .||+++ .+..||+.|.++|+.|.|+++.+.+.. T Consensus 12 ~GG~e~--~~~~la~~L~~~G~~V~v~~~~~~~~~ 44 (370) T d2iw1a1 12 FGGLQR--DFMRIASTVAARGHHVRVYTQSWEGDC 44 (370) T ss_dssp TCHHHH--HHHHHHHHHHHTTCCEEEEESEECSCC T ss_pred CCCHHH--HHHHHHHHHHHCCCEEEEEECCCCCCC T ss_conf 998999--999999999977997999956787788 No 151 >d1ofha_ c.37.1.20 (A:) HslU {Haemophilus influenzae [TaxId: 727]} Probab=43.90 E-value=4.5 Score=17.90 Aligned_cols=26 Identities=35% Similarity=0.494 Sum_probs=18.5 Q ss_pred CCCEEEECCEEECCCCCCHHHHHHHHHHH Q ss_conf 89889982300078887489999999985 Q gi|254780401|r 43 PIPVICVGGFVMGGTGKTPTALAIAKAVI 71 (338) Q Consensus 43 ~~pVI~VGNitvGGtGKTP~v~~l~~~l~ 71 (338) |--++-+|- =|||||=++..||+.+. T Consensus 49 ~~~iLl~GP---pG~GKT~lAkalA~~~~ 74 (309) T d1ofha_ 49 PKNILMIGP---TGVGKTEIARRLAKLAN 74 (309) T ss_dssp CCCEEEECC---TTSSHHHHHHHHHHHHT T ss_pred CCEEEEECC---CCCCHHHHHHHHHHCCC T ss_conf 866999899---99888899999862132 No 152 >d1kaga_ c.37.1.2 (A:) Shikimate kinase (AroK) {Escherichia coli [TaxId: 562]} Probab=43.90 E-value=3.9 Score=18.38 Aligned_cols=23 Identities=26% Similarity=0.439 Sum_probs=17.6 Q ss_pred CEEEECCEEECCCCCCHHHHHHHHHH Q ss_conf 88998230007888748999999998 Q gi|254780401|r 45 PVICVGGFVMGGTGKTPTALAIAKAV 70 (338) Q Consensus 45 pVI~VGNitvGGtGKTP~v~~l~~~l 70 (338) +|+-+| .-|+|||-+...||+.| T Consensus 4 ~I~l~G---~~GsGKSTvak~La~~L 26 (169) T d1kaga_ 4 NIFLVG---PMGAGKSTIGRQLAQQL 26 (169) T ss_dssp CEEEEC---CTTSCHHHHHHHHHHHT T ss_pred EEEEEC---CCCCCHHHHHHHHHHHH T ss_conf 499989---99999999999999996 No 153 >d2fz4a1 c.37.1.19 (A:24-229) DNA repair protein RAD25 {Archaeoglobus fulgidus [TaxId: 2234]} Probab=43.88 E-value=6.6 Score=16.74 Aligned_cols=13 Identities=46% Similarity=0.670 Sum_probs=5.4 Q ss_pred CCCCCHHHHHHHH Q ss_conf 8887489999999 Q gi|254780401|r 56 GTGKTPTALAIAK 68 (338) Q Consensus 56 GtGKTP~v~~l~~ 68 (338) |+|||=+.++++. T Consensus 95 G~GKT~~a~~~~~ 107 (206) T d2fz4a1 95 GSGKTHVAMAAIN 107 (206) T ss_dssp STTHHHHHHHHHH T ss_pred CCCCEEHHHHHHH T ss_conf 9982643776787 No 154 >d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]} Probab=43.73 E-value=4.4 Score=18.01 Aligned_cols=23 Identities=22% Similarity=0.398 Sum_probs=18.1 Q ss_pred EECCCCCCHHHHHHHHHHHHCCCCEEE Q ss_conf 007888748999999998524731598 Q gi|254780401|r 53 VMGGTGKTPTALAIAKAVIDKNLKPGF 79 (338) Q Consensus 53 tvGGtGKTP~v~~l~~~l~~~g~~~~i 79 (338) -+||+|-.+ ||++|.++|+.|.- T Consensus 15 GigG~GMs~----LA~~L~~~G~~VsG 37 (96) T d1p3da1 15 GIGGAGMSG----IAEILLNEGYQISG 37 (96) T ss_dssp TTTSTTHHH----HHHHHHHHTCEEEE T ss_pred EECHHHHHH----HHHHHHHCCCEEEE T ss_conf 877999999----99999848977999 No 155 >d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} Probab=43.67 E-value=8.7 Score=15.90 Aligned_cols=30 Identities=20% Similarity=0.324 Sum_probs=23.6 Q ss_pred EEECCCCCCHHHHHHHHHHHHCCCCEEEEEEC Q ss_conf 00078887489999999985247315987604 Q gi|254780401|r 52 FVMGGTGKTPTALAIAKAVIDKNLKPGFLSRG 83 (338) Q Consensus 52 itvGGtGKTP~v~~l~~~l~~~g~~~~ilsRG 83 (338) |.+||||= +=.+|+++|.++|+.|..+.|- T Consensus 5 LITGatGf--iGs~lv~~Ll~~g~~V~~~~r~ 34 (357) T d1db3a_ 5 LITGVTGQ--DGSYLAEFLLEKGYEVHGIKRR 34 (357) T ss_dssp EEETTTSH--HHHHHHHHHHHTTCEEEEECC- T ss_pred EEECCCCH--HHHHHHHHHHHCCCEEEEEECC T ss_conf 99688868--9999999999786989999789 No 156 >d2j0sa1 c.37.1.19 (A:22-243) Probable ATP-dependent RNA helicase DDX48 {Human (Homo sapiens) [TaxId: 9606]} Probab=43.19 E-value=8.8 Score=15.85 Aligned_cols=96 Identities=14% Similarity=0.128 Sum_probs=44.9 Q ss_pred CCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCEEEECCCCCHHHHCCHHHHHHHCCC----CCCCCCHHHHHHHH Q ss_conf 78887489999999985247315987604578777755871456788770421233220576----34652012256641 Q gi|254780401|r 55 GGTGKTPTALAIAKAVIDKNLKPGFLSRGYGRKSRISFRVDLEKHSAYDVGDEPLLLARRAV----TIVTSDRKIGVQML 130 (338) Q Consensus 55 GGtGKTP~v~~l~~~l~~~g~~~~ilsRGYg~~~~~~~~v~~~~~~~~~vGDEp~lla~~~p----v~V~~~R~~~~~~~ 130 (338) =|||||- .|+.-.++..... ... ...+.+.+...-+.++-++...+++... .+++.......... T Consensus 63 TGSGKTl--ayllPil~~l~~~--------~~~-~~~lil~PtreLa~Qi~~~~~~l~~~~~i~~~~~~g~~~~~~~~~~ 131 (222) T d2j0sa1 63 SGTGKTA--TFSISVLQCLDIQ--------VRE-TQALILAPTRELAVQIQKGLLALGDYMNVQCHACIGGTNVGEDIRK 131 (222) T ss_dssp TTSSHHH--HHHHHHHHTCCTT--------SCS-CCEEEECSSHHHHHHHHHHHHHHTTTTTCCEEEECTTSCHHHHHHH T ss_pred CCHHHHH--HHCCCCCCCCCCC--------CCC-CEEEEECCHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCHHHHHH T ss_conf 4341454--4045401100333--------467-4257755528888999999999847563458887511210246787 Q ss_pred CCCCCCEEEECCC-----CCCCC-CCCEEEEEEECCC Q ss_conf 0245747997183-----22344-1230699996184 Q gi|254780401|r 131 LQEGVDIIIMDDG-----FHSAD-LQADFSLIVVNSH 161 (338) Q Consensus 131 ~~~~~diiIlDDG-----fQh~~-l~rdl~Ivl~d~~ 161 (338) .+.++|++|.-=| +++.. --+++..+++|-- T Consensus 132 l~~~~~Ilv~TPgrl~~~~~~~~~~~~~l~~lVlDEa 168 (222) T d2j0sa1 132 LDYGQHVVAGTPGRVFDMIRRRSLRTRAIKMLVLDEA 168 (222) T ss_dssp HHHCCSEEEECHHHHHHHHHTTSSCCTTCCEEEEETH T ss_pred HCCCCEEEECCCCCHHHCCCCCCCCCCCCEEEEECCH T ss_conf 5148738867987577612001034442303554224 No 157 >d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]} Probab=42.94 E-value=8.9 Score=15.83 Aligned_cols=34 Identities=15% Similarity=0.310 Sum_probs=25.4 Q ss_pred EEECCCCCCHHHHHHHHHHHHCCCCEEEE---EECCCCC Q ss_conf 00078887489999999985247315987---6045787 Q gi|254780401|r 52 FVMGGTGKTPTALAIAKAVIDKNLKPGFL---SRGYGRK 87 (338) Q Consensus 52 itvGGtGKTP~v~~l~~~l~~~g~~~~il---sRGYg~~ 87 (338) |.+|||| =+=-+|++.|.++|+.|.++ ++++... T Consensus 6 LITG~tG--fIGs~lv~~Ll~~g~~V~~ld~~~~~~~~~ 42 (346) T d1ek6a_ 6 LVTGGAG--YIGSHTVLELLEAGYLPVVIDNFHNAFRGG 42 (346) T ss_dssp EEETTTS--HHHHHHHHHHHHTTCCEEEEECSSSSCBCS T ss_pred EEECCCC--HHHHHHHHHHHHCCCEEEEEECCCCCCCCC T ss_conf 9978973--899999999997869799997787421344 No 158 >d1p6xa_ c.37.1.1 (A:) Thymidine kinase {Equine herpesvirus type 4 [TaxId: 10331]} Probab=42.51 E-value=6.7 Score=16.68 Aligned_cols=31 Identities=23% Similarity=0.351 Sum_probs=22.6 Q ss_pred EEEECCEEECCCCCCHHHHHHHHHHHHCCCCEEEE Q ss_conf 89982300078887489999999985247315987 Q gi|254780401|r 46 VICVGGFVMGGTGKTPTALAIAKAVIDKNLKPGFL 80 (338) Q Consensus 46 VI~VGNitvGGtGKTP~v~~l~~~l~~~g~~~~il 80 (338) |..=||+ |+|||-++..|++.+..++ .+.++ T Consensus 9 I~iEG~i---GsGKSTl~~~L~~~l~~~~-~v~~~ 39 (333) T d1p6xa_ 9 IYLDGVY---GIGKSTTGRVMASAASGGS-PTLYF 39 (333) T ss_dssp EEEECST---TSSHHHHHHHHHSGGGCSS-CEEEE T ss_pred EEEECCC---CCCHHHHHHHHHHHHCCCC-CEEEE T ss_conf 9998886---6789999999999865699-76998 No 159 >d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]} Probab=42.26 E-value=9.1 Score=15.76 Aligned_cols=29 Identities=14% Similarity=0.156 Sum_probs=23.4 Q ss_pred EEECCCCCCHHHHHHHHHHHHCCCCEEEEEE Q ss_conf 0007888748999999998524731598760 Q gi|254780401|r 52 FVMGGTGKTPTALAIAKAVIDKNLKPGFLSR 82 (338) Q Consensus 52 itvGGtGKTP~v~~l~~~l~~~g~~~~ilsR 82 (338) |++|||| =+-.+|++.|.+.|++|..+.| T Consensus 20 LVTG~tG--fIGs~lv~~L~~~g~~V~~~d~ 48 (341) T d1sb8a_ 20 LITGVAG--FIGSNLLETLLKLDQKVVGLDN 48 (341) T ss_dssp EEETTTS--HHHHHHHHHHHHTTCEEEEEEC T ss_pred EEECCCC--HHHHHHHHHHHHCCCEEEEEEC T ss_conf 9966887--8999999999978698999978 No 160 >d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} Probab=41.94 E-value=9.2 Score=15.72 Aligned_cols=29 Identities=17% Similarity=0.264 Sum_probs=24.2 Q ss_pred EEECCCCCCHHHHHHHHHHHHCCCCEEEEEE Q ss_conf 0007888748999999998524731598760 Q gi|254780401|r 52 FVMGGTGKTPTALAIAKAVIDKNLKPGFLSR 82 (338) Q Consensus 52 itvGGtGKTP~v~~l~~~l~~~g~~~~ilsR 82 (338) |.+|||| =+-.+|++.|.++|++|.++.| T Consensus 4 LItG~tG--fIG~~l~~~L~~~g~~V~~~d~ 32 (338) T d1udca_ 4 LVTGGSG--YIGSHTCVQLLQNGHDVIILDN 32 (338) T ss_dssp EEETTTS--HHHHHHHHHHHHTTCEEEEEEC T ss_pred EEECCCC--HHHHHHHHHHHHCCCEEEEEEC T ss_conf 9989887--8999999999978497999978 No 161 >d1svma_ c.37.1.20 (A:) Papillomavirus large T antigen helicase domain {Simian virus 40 [TaxId: 10633]} Probab=41.89 E-value=5.1 Score=17.55 Aligned_cols=17 Identities=29% Similarity=0.176 Sum_probs=15.3 Q ss_pred CCCCCCHHHHHHHHHHH Q ss_conf 78887489999999985 Q gi|254780401|r 55 GGTGKTPTALAIAKAVI 71 (338) Q Consensus 55 GGtGKTP~v~~l~~~l~ 71 (338) -|||||-++..||+.+. T Consensus 163 ~~~gk~~~~~~~~~~~~ 179 (362) T d1svma_ 163 IDSGKTTLAAALLELCG 179 (362) T ss_dssp TTSSHHHHHHHHHHHHC T ss_pred CCCCHHHHHHHHHHHCC T ss_conf 99888999999999859 No 162 >d2g0ta1 c.37.1.10 (A:1-338) Hypothetical protein TM0796 {Thermotoga maritima [TaxId: 2336]} Probab=41.83 E-value=9.2 Score=15.71 Aligned_cols=122 Identities=17% Similarity=0.185 Sum_probs=54.1 Q ss_pred CCEEEECCEEECCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCE---------EEECCCCCHHHHCCHHHHHHHC Q ss_conf 9889982300078887489999999985247315987604578777755---------8714567887704212332205 Q gi|254780401|r 44 IPVICVGGFVMGGTGKTPTALAIAKAVIDKNLKPGFLSRGYGRKSRISF---------RVDLEKHSAYDVGDEPLLLARR 114 (338) Q Consensus 44 ~pVI~VGNitvGGtGKTP~v~~l~~~l~~~g~~~~ilsRGYg~~~~~~~---------~v~~~~~~~~~vGDEp~lla~~ 114 (338) +-|.|-|++ -.-.|||= .-|.++-+ .+.++++-+-+-++..+.. ++. +-..+.+.|=+.+++- - T Consensus 13 a~Il~~g~~-~~~~gKTa--~gLlRy~~--~~~v~~V~~~~aG~~~~~~l~g~~~~IPIv~-s~~~A~~~g~~~liiG-v 85 (338) T d2g0ta1 13 AAIVAWGQL-GTAHAKTT--YGLLRHSR--LFKPVCVVAEHEGKMASDFVKPVRYDVPVVS-SVEKAKEMGAEVLIIG-V 85 (338) T ss_dssp EEEECTTTT-TSGGGHHH--HHHHHHCS--SEEEEEEESSCTTCBGGGTCC-CCSCCBEES-SHHHHHHTTCCEEEEC-C T ss_pred EEEEECCCC-CCCCCHHH--HHHHHCCC--CCEEEEEECCCCCCCHHHHCCCCCCCCCEEC-CHHHHHHCCCCEEEEE-E T ss_conf 899828986-99975676--46774467--8707999777778735432278789988767-8999986699989998-5 Q ss_pred CC--CCCCCCHHHHHHHHCCCCCCEEEECCCCCCCCCCCEEE---------EEEECCCCCCCCCCCCCCHHHHH Q ss_conf 76--34652012256641024574799718322344123069---------99961843356655376136521 Q gi|254780401|r 115 AV--TIVTSDRKIGVQMLLQEGVDIIIMDDGFHSADLQADFS---------LIVVNSHRGLGNGLVFPAGPLRV 177 (338) Q Consensus 115 ~p--v~V~~~R~~~~~~~~~~~~diiIlDDGfQh~~l~rdl~---------Ivl~d~~~~~gn~~llPaGpLRE 177 (338) +| -...++.+..+..+.+.+.|++- ||.+ .|.-|-+ .-++|-.+|. ...-+..|..++ T Consensus 86 Ap~GG~lp~~w~~~i~~Al~~Gl~Ivs---GLH~-~L~ddpel~~~A~~~g~~i~DvR~p~-~~l~v~~G~~~~ 154 (338) T d2g0ta1 86 SNPGGYLEEQIATLVKKALSLGMDVIS---GLHF-KISQQTEFLKIAHENGTRIIDIRIPP-LELDVLRGGIYR 154 (338) T ss_dssp CSCCHHHHHHHHHHHHHHHHTTCEEEE---CCCC---CCHHHHHHHHHHHTCCEEESSSCC-SSCCCCCSGGGG T ss_pred CCCCCCCCHHHHHHHHHHHHCCCEEEE---CCHH-HHCCCHHHHHHHHHCCCEEEEEECCC-CCCCHHHCCHHC T ss_conf 266885899999999999985981772---2124-43168899999876799899920899-765621131012 No 163 >d1e6ca_ c.37.1.2 (A:) Shikimate kinase (AroK) {Erwinia chrysanthemi [TaxId: 556]} Probab=41.23 E-value=9.4 Score=15.65 Aligned_cols=24 Identities=33% Similarity=0.566 Sum_probs=18.5 Q ss_pred CCEEEECCEEECCCCCCHHHHHHHHHH Q ss_conf 988998230007888748999999998 Q gi|254780401|r 44 IPVICVGGFVMGGTGKTPTALAIAKAV 70 (338) Q Consensus 44 ~pVI~VGNitvGGtGKTP~v~~l~~~l 70 (338) -|||-+| .-|+|||-+...||+.| T Consensus 3 ~~Iil~G---~~GsGKSTia~~LA~~L 26 (170) T d1e6ca_ 3 EPIFMVG---ARGCGMTTVGRELARAL 26 (170) T ss_dssp CCEEEES---CTTSSHHHHHHHHHHHH T ss_pred CCEEEEC---CCCCCHHHHHHHHHHHH T ss_conf 9889988---99998899999999994 No 164 >d1njfa_ c.37.1.20 (A:) delta prime subunit of DNA polymerase III, N-domain {Escherichia coli [TaxId: 562]} Probab=40.29 E-value=9.7 Score=15.55 Aligned_cols=30 Identities=27% Similarity=0.277 Sum_probs=22.8 Q ss_pred CCCCCEEEECCEEECCCCCCHHHHHHHHHHHHC Q ss_conf 388988998230007888748999999998524 Q gi|254780401|r 41 HAPIPVICVGGFVMGGTGKTPTALAIAKAVIDK 73 (338) Q Consensus 41 ~~~~pVI~VGNitvGGtGKTP~v~~l~~~l~~~ 73 (338) +.|-.++-.|. =|+|||.++.++++.+... T Consensus 32 ~~~~~~Ll~Gp---~G~GKtt~a~~~~~~l~~~ 61 (239) T d1njfa_ 32 RIHHAYLFSGT---RGVGKTSIARLLAKGLNCE 61 (239) T ss_dssp CCCSEEEEECS---TTSSHHHHHHHHHHHHHCT T ss_pred CCCEEEEEECC---CCCCHHHHHHHHHHHHCCC T ss_conf 98705988889---9875899999999984685 No 165 >d1ur4a_ c.1.8.3 (A:) Beta-1,4-galactanase {Bacillus licheniformis [TaxId: 1402]} Probab=40.10 E-value=9.8 Score=15.53 Aligned_cols=64 Identities=13% Similarity=0.021 Sum_probs=32.9 Q ss_pred EEEEEECCCCHH---HHHHHHHHHCCC--CCCCCCCCCCCCCCHHHHHH-HHHHHHHCCCEEEECHHHHHH Q ss_conf 389874155357---899988740100--00122143323489899999-999756479879985466343 Q gi|254780401|r 224 KVLAFSGIADTE---KFFTTVRQLGAL--IEQCYSFGDHAHLSDKKIAY-LLDQAQQKGLILVTTAKDAMR 288 (338) Q Consensus 224 ~v~afsGIa~P~---~F~~~L~~~g~~--i~~~~~fpDHh~ys~~dl~~-i~~~a~~~~~~iiTTEKD~VK 288 (338) -++.+++.++.. .|++.+...+.. ++....||- ...+..++.. +...+...+.+++++|=.+-- T Consensus 189 vi~~~~~~~~~~~~~~~~~~~~~~~~~~d~ig~s~Y~~-w~~~~~~~~~~l~~l~~~~~k~v~v~E~~~~~ 258 (387) T d1ur4a_ 189 VALHFTNPETSGRYAWIAETLHRHHVDYDVFASSYYPF-WHGTLKNLTSVLTSVADTYGKKVMVAETSYTY 258 (387) T ss_dssp EEEEECCTTSTTHHHHHHHHHHHTTCCCSEEEEEECTT-TSCCHHHHHHHHHHHHHHHCCEEEEEEECCCS T ss_pred EEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEECC-CCCCHHHHHHHHHHHHHHHCCCEEEEEECCCC T ss_conf 78722676532778899999986598764002023123-47608999999999999839963899850443 No 166 >d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]} Probab=39.63 E-value=8.6 Score=15.91 Aligned_cols=26 Identities=19% Similarity=0.392 Sum_probs=21.5 Q ss_pred CHHHHHHHHHHHHCCCCEEEEEECCC Q ss_conf 48999999998524731598760457 Q gi|254780401|r 60 TPTALAIAKAVIDKNLKPGFLSRGYG 85 (338) Q Consensus 60 TP~v~~l~~~l~~~g~~~~ilsRGYg 85 (338) +|-+..+.+.|+++|++++|+|-|+. T Consensus 84 ~pg~~~~i~~lk~~G~~~~ivS~~~~ 109 (217) T d1nnla_ 84 TPGIRELVSRLQERNVQVFLISGGFR 109 (217) T ss_dssp CTTHHHHHHHHHHTTCEEEEEEEEEH T ss_pred CHHHHHHHHHHHHCCCEEEEECCCCH T ss_conf 77799999999737997999899935 No 167 >d2fi1a1 c.108.1.3 (A:4-190) Putative hydrolase SP0805 {Streptococcus pneumoniae [TaxId: 1313]} Probab=39.45 E-value=8.6 Score=15.93 Aligned_cols=23 Identities=13% Similarity=0.183 Sum_probs=13.8 Q ss_pred CHHHHHHHHHHHCCCCCCCCCCCCC Q ss_conf 3578999887401000012214332 Q gi|254780401|r 233 DTEKFFTTVRQLGALIEQCYSFGDH 257 (338) Q Consensus 233 ~P~~F~~~L~~~g~~i~~~~~fpDH 257 (338) +|+.|...++.++.+ ..+.+-|+ T Consensus 136 ~p~~~~~~~~~~~~~--~~l~vgDs 158 (187) T d2fi1a1 136 NPESMLYLREKYQIS--SGLVIGDR 158 (187) T ss_dssp SCHHHHHHHHHTTCS--SEEEEESS T ss_pred CHHHHHHHHHHCCCC--CEEEEECC T ss_conf 899999999984999--76999079 No 168 >d1p9ra_ c.37.1.11 (A:) Extracellular secretion NTPase EpsE {Vibrio cholerae [TaxId: 666]} Probab=39.44 E-value=10 Score=15.46 Aligned_cols=20 Identities=25% Similarity=0.252 Sum_probs=10.4 Q ss_pred EEEEEECCCCHHHHHHHHHH Q ss_conf 38987415535789998874 Q gi|254780401|r 224 KVLAFSGIADTEKFFTTVRQ 243 (338) Q Consensus 224 ~v~afsGIa~P~~F~~~L~~ 243 (338) .++.+-=|-|++.....++. T Consensus 229 Dvi~igEiRd~~ta~~a~~a 248 (401) T d1p9ra_ 229 DVVMVGEIRDLETAQIAVQA 248 (401) T ss_dssp SEEEESCCCSHHHHHHHHHH T ss_pred CEEEECCCCCHHHHHHHHHH T ss_conf 88984576875999999999 No 169 >d2fuka1 c.69.1.36 (A:3-220) XC6422 protein {Xanthomonas campestris [TaxId: 339]} Probab=39.16 E-value=10 Score=15.43 Aligned_cols=44 Identities=16% Similarity=0.210 Sum_probs=34.5 Q ss_pred CEEEECCEEECCCCCCHHHHHHHHHHHHCCCCEEEE-EECCCCCC Q ss_conf 889982300078887489999999985247315987-60457877 Q gi|254780401|r 45 PVICVGGFVMGGTGKTPTALAIAKAVIDKNLKPGFL-SRGYGRKS 88 (338) Q Consensus 45 pVI~VGNitvGGtGKTP~v~~l~~~l~~~g~~~~il-sRGYg~~~ 88 (338) -|+|=++=..||+-.-+++..+++.|.++||.+... .||||.+. T Consensus 38 ~vl~Hph~~~GG~~~~~~~~~la~~l~~~G~~vlrfd~RG~G~S~ 82 (218) T d2fuka1 38 AIVCHPLSTEGGSMHNKVVTMAARALRELGITVVRFNFRSVGTSA 82 (218) T ss_dssp EEEECSCTTTTCSTTCHHHHHHHHHHHTTTCEEEEECCTTSTTCC T ss_pred EEEECCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCC T ss_conf 999799988786789869999999999759859996467876677 No 170 >d1zh2a1 c.23.1.1 (A:2-120) Transcriptional regulatory protein KdpE, N-terminal domain {Escherichia coli [TaxId: 562]} Probab=38.98 E-value=10 Score=15.41 Aligned_cols=20 Identities=10% Similarity=0.212 Sum_probs=10.7 Q ss_pred EEEEEECCCCHHHHHHHHHH Q ss_conf 38987415535789998874 Q gi|254780401|r 224 KVLAFSGIADTEKFFTTVRQ 243 (338) Q Consensus 224 ~v~afsGIa~P~~F~~~L~~ 243 (338) +++++|+-++++...+.++. T Consensus 73 piI~lt~~~~~~~~~~a~~~ 92 (119) T d1zh2a1 73 PVIVLSARSEESDKIAALDA 92 (119) T ss_dssp CEEEEESCCSHHHHHHHHHH T ss_pred CEEEEECCCCHHHHHHHHHC T ss_conf 67999515899999999986 No 171 >d1zcba2 c.37.1.8 (A:47-75,A:202-372) Transducin (alpha subunit) {Mouse (Mus musculus) [TaxId: 10090]} Probab=38.80 E-value=6.9 Score=16.62 Aligned_cols=20 Identities=20% Similarity=0.522 Sum_probs=15.7 Q ss_pred CCEEEECCEEECCCCCCHHHHHH Q ss_conf 98899823000788874899999 Q gi|254780401|r 44 IPVICVGGFVMGGTGKTPTALAI 66 (338) Q Consensus 44 ~pVI~VGNitvGGtGKTP~v~~l 66 (338) +.|+.||. +|+|||-++..+ T Consensus 3 iKivllG~---~~vGKTsll~r~ 22 (200) T d1zcba2 3 VKILLLGA---GESGKSTFLKQM 22 (200) T ss_dssp EEEEEECS---TTSSHHHHHHHH T ss_pred EEEEEECC---CCCCHHHHHHHH T ss_conf 89999989---999989999988 No 172 >d2a9pa1 c.23.1.1 (A:2-118) DNA-binding response regulator MicA, N-terminal domain {Streptococcus pneumoniae [TaxId: 1313]} Probab=38.78 E-value=10 Score=15.39 Aligned_cols=26 Identities=23% Similarity=0.350 Sum_probs=15.0 Q ss_pred CCCCCCCHHHHHHHHCCCCCCEEEEC Q ss_conf 63465201225664102457479971 Q gi|254780401|r 116 VTIVTSDRKIGVQMLLQEGVDIIIMD 141 (338) Q Consensus 116 pv~V~~~R~~~~~~~~~~~~diiIlD 141 (338) .|..+.+-.+|...+.+..+|+||+| T Consensus 26 ~v~~a~~~~eal~~~~~~~~dlillD 51 (117) T d2a9pa1 26 EVVTAFNGREALEQFEAEQPDIIILD 51 (117) T ss_dssp EEEEESSHHHHHHHHHHHCCSEEEEC T ss_pred EEEEECCHHHHHHHHHHCCCCEEEEC T ss_conf 99998787999999983698789850 No 173 >d1iira_ c.87.1.5 (A:) UDP-glucosyltransferase GtfB {Amycolatopsis orientalis [TaxId: 31958]} Probab=38.68 E-value=10 Score=15.38 Aligned_cols=33 Identities=21% Similarity=0.195 Sum_probs=24.5 Q ss_pred EEECCC-CCCHHHHHHHHHHHHCCCCEEEEEECC Q ss_conf 000788-874899999999852473159876045 Q gi|254780401|r 52 FVMGGT-GKTPTALAIAKAVIDKNLKPGFLSRGY 84 (338) Q Consensus 52 itvGGt-GKTP~v~~l~~~l~~~g~~~~ilsRGY 84 (338) |+.+|| |-.==.+.|++.|.++|+.|.+++-+. T Consensus 5 ~~~~gt~Gh~~P~lala~~L~~~Gh~V~~~~~~~ 38 (401) T d1iira_ 5 LATCGSRGDTEPLVALAVRVRDLGADVRMCAPPD 38 (401) T ss_dssp EECCSCHHHHHHHHHHHHHHHHTTCEEEEEECGG T ss_pred EECCCCHHHHHHHHHHHHHHHHCCCEEEEEECCC T ss_conf 9889872689999999999998799899996830 No 174 >d2btma_ c.1.1.1 (A:) Triosephosphate isomerase {Bacillus stearothermophilus [TaxId: 1422]} Probab=38.49 E-value=7.6 Score=16.29 Aligned_cols=14 Identities=7% Similarity=0.285 Sum_probs=5.0 Q ss_pred EECCCCHHHHHHHH Q ss_conf 74155357899988 Q gi|254780401|r 228 FSGIADTEKFFTTV 241 (338) Q Consensus 228 fsGIa~P~~F~~~L 241 (338) .-|=-+|+...+.+ T Consensus 209 YGGSV~~~N~~~i~ 222 (251) T d2btma_ 209 YGGSVKPDNIRDFL 222 (251) T ss_dssp EESSCCTTTHHHHH T ss_pred EECCCCHHHHHHHH T ss_conf 50897986999996 No 175 >d1qhxa_ c.37.1.3 (A:) Chloramphenicol phosphotransferase {Streptomyces venezuelae [TaxId: 54571]} Probab=38.31 E-value=5.5 Score=17.32 Aligned_cols=17 Identities=12% Similarity=0.216 Sum_probs=14.7 Q ss_pred CCCCCCHHHHHHHHHHH Q ss_conf 78887489999999985 Q gi|254780401|r 55 GGTGKTPTALAIAKAVI 71 (338) Q Consensus 55 GGtGKTP~v~~l~~~l~ 71 (338) =|+|||-++..|++.|. T Consensus 12 ~GsGKsTva~~L~~~l~ 28 (178) T d1qhxa_ 12 SSAGKSGIVRCLQSVLP 28 (178) T ss_dssp TTSSHHHHHHHHHHHSS T ss_pred CCCCHHHHHHHHHHHCC T ss_conf 99998999999999728 No 176 >d1wrba1 c.37.1.19 (A:164-401) putative ATP-dependent RNA helicase VlgB {Flatworm (Dugesia japonica) [TaxId: 6161]} Probab=37.99 E-value=11 Score=15.31 Aligned_cols=59 Identities=15% Similarity=0.170 Sum_probs=23.1 Q ss_pred CCCCCCHH-HHHHHHHHHHCCCCEEEEEECCCCCCCCCEEEECCCCCHHHHCCHHHHHHHCCC Q ss_conf 78887489-999999985247315987604578777755871456788770421233220576 Q gi|254780401|r 55 GGTGKTPT-ALAIAKAVIDKNLKPGFLSRGYGRKSRISFRVDLEKHSAYDVGDEPLLLARRAV 116 (338) Q Consensus 55 GGtGKTP~-v~~l~~~l~~~g~~~~ilsRGYg~~~~~~~~v~~~~~~~~~vGDEp~lla~~~p 116 (338) =|||||=. ++-+.+.+........-.++.. ......+.+....+.++..+-..+....+ T Consensus 67 TGsGKTlayllp~l~~l~~~~~~~~~~~~~~---~~~alil~pt~el~~q~~~~~~~~~~~~~ 126 (238) T d1wrba1 67 TGSGKTAAFLIPIINHLVCQDLNQQRYSKTA---YPKCLILAPTRELAIQILSESQKFSLNTP 126 (238) T ss_dssp TTSSHHHHHHHHHHHHHHTTCC------CCB---CCSEEEECSSHHHHHHHHHHHHHHHTTSS T ss_pred CCCCCCEEEHHHHHHHHHHCCCCCCCCCCCC---CCEEEEECCCHHHHCCHHEEEEECCCCCC T ss_conf 7777511319999999972221112456777---83699953514430100101110035788 No 177 >d1ly1a_ c.37.1.1 (A:) Polynucleotide kinase, kinase domain {Bacteriophage T4 [TaxId: 10665]} Probab=37.95 E-value=7.4 Score=16.40 Aligned_cols=23 Identities=26% Similarity=0.160 Sum_probs=13.1 Q ss_pred CCCCCCHHHHHHHHHHHHCCCCEEEEE Q ss_conf 788874899999999852473159876 Q gi|254780401|r 55 GGTGKTPTALAIAKAVIDKNLKPGFLS 81 (338) Q Consensus 55 GGtGKTP~v~~l~~~l~~~g~~~~ils 81 (338) =|+|||-++..|+ +......++| T Consensus 11 pGsGKTTla~~L~----~~~~~~~~~~ 33 (152) T d1ly1a_ 11 PGSGKSTWAREFI----AKNPGFYNIN 33 (152) T ss_dssp TTSSHHHHHHHHH----HHSTTEEEEC T ss_pred CCCCHHHHHHHHH----HHCCCCEEEC T ss_conf 9999999999999----9579979960 No 178 >d2cnda2 c.25.1.1 (A:125-270) Nitrate reductase {Corn (Zea mays) [TaxId: 4577]} Probab=37.47 E-value=6.8 Score=16.64 Aligned_cols=21 Identities=33% Similarity=0.562 Sum_probs=16.8 Q ss_pred EECCCCCCHHHHHHHHHHHHC Q ss_conf 007888748999999998524 Q gi|254780401|r 53 VMGGTGKTPTALAIAKAVIDK 73 (338) Q Consensus 53 tvGGtGKTP~v~~l~~~l~~~ 73 (338) .+||||=||+...+-..++.. T Consensus 18 IAgGtGIaP~~s~l~~~~~~~ 38 (146) T d2cnda2 18 ICGGSGITPMYQIIQAVLRDQ 38 (146) T ss_dssp EEEGGGHHHHHHHHHHHHHTT T ss_pred EECEEEHHHHHHHHHHHHHHC T ss_conf 966288749999999999847 No 179 >d2bdta1 c.37.1.25 (A:1-176) Hypothetical protein BH3686 {Bacillus halodurans [TaxId: 86665]} Probab=37.39 E-value=5.4 Score=17.39 Aligned_cols=17 Identities=29% Similarity=0.421 Sum_probs=13.6 Q ss_pred CCCCCCHHHHHHHHHHH Q ss_conf 78887489999999985 Q gi|254780401|r 55 GGTGKTPTALAIAKAVI 71 (338) Q Consensus 55 GGtGKTP~v~~l~~~l~ 71 (338) -|+|||-++..|++.+. T Consensus 11 ~GsGKTTva~~L~~~~~ 27 (176) T d2bdta1 11 AGVGKSTTCKRLAAQLD 27 (176) T ss_dssp TTSSHHHHHHHHHHHSS T ss_pred CCCCHHHHHHHHHHHCC T ss_conf 99998999999999809 No 180 >d2vp4a1 c.37.1.1 (A:12-208) Deoxyribonucleoside kinase {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Probab=37.27 E-value=2.5 Score=19.78 Aligned_cols=30 Identities=27% Similarity=0.281 Sum_probs=17.6 Q ss_pred CCEEEECCEEECCCCCCHHHHHHHHHHHHCCCCEEEE Q ss_conf 9889982300078887489999999985247315987 Q gi|254780401|r 44 IPVICVGGFVMGGTGKTPTALAIAKAVIDKNLKPGFL 80 (338) Q Consensus 44 ~pVI~VGNitvGGtGKTP~v~~l~~~l~~~g~~~~il 80 (338) .-|..-|+. |+|||-++..|++.| ..+.++ T Consensus 10 ~~I~ieG~~---GsGKTTl~~~L~~~l----~~~~~~ 39 (197) T d2vp4a1 10 FTVLIEGNI---GSGKTTYLNHFEKYK----NDICLL 39 (197) T ss_dssp EEEEEECST---TSCHHHHHHTTGGGT----TTEEEE T ss_pred EEEEEECCC---CCCHHHHHHHHHHHH----CCCEEE T ss_conf 199988999---988899999999870----786789 No 181 >d1knqa_ c.37.1.17 (A:) Gluconate kinase {Escherichia coli [TaxId: 562]} Probab=36.66 E-value=6.8 Score=16.65 Aligned_cols=17 Identities=29% Similarity=0.583 Sum_probs=14.6 Q ss_pred ECCCCCCHHHHHHHHHH Q ss_conf 07888748999999998 Q gi|254780401|r 54 MGGTGKTPTALAIAKAV 70 (338) Q Consensus 54 vGGtGKTP~v~~l~~~l 70 (338) .=|||||-++..|++.| T Consensus 14 ~~GsGKsT~a~~La~~l 30 (171) T d1knqa_ 14 VSGSGKSAVASEVAHQL 30 (171) T ss_dssp STTSCHHHHHHHHHHHH T ss_pred CCCCCHHHHHHHHHHHH T ss_conf 99989899999999986 No 182 >d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Probab=36.65 E-value=11 Score=15.17 Aligned_cols=30 Identities=17% Similarity=0.180 Sum_probs=23.6 Q ss_pred EEECCCCCCHHHHHHHHHHHHCCCCEEEEEEC Q ss_conf 00078887489999999985247315987604 Q gi|254780401|r 52 FVMGGTGKTPTALAIAKAVIDKNLKPGFLSRG 83 (338) Q Consensus 52 itvGGtGKTP~v~~l~~~l~~~g~~~~ilsRG 83 (338) |.+|||| =+-.+|++.|.++|++|..+.|- T Consensus 5 LVTGatG--fIG~~lv~~Ll~~g~~V~~~d~~ 34 (347) T d1z45a2 5 LVTGGAG--YIGSHTVVELIENGYDCVVADNL 34 (347) T ss_dssp EEETTTS--HHHHHHHHHHHHTTCEEEEEECC T ss_pred EEECCCC--HHHHHHHHHHHHCCCEEEEEECC T ss_conf 9918874--79999999999786959999788 No 183 >d2p6ra3 c.37.1.19 (A:1-202) Hel308 helicase {Archaeoglobus fulgidus [TaxId: 2234]} Probab=36.62 E-value=6.1 Score=16.98 Aligned_cols=22 Identities=9% Similarity=0.179 Sum_probs=14.5 Q ss_pred CCEEEEEEC-CCCHHHHHHHHHH Q ss_conf 863898741-5535789998874 Q gi|254780401|r 222 GKKVLAFSG-IADTEKFFTTVRQ 243 (338) Q Consensus 222 ~k~v~afsG-Ia~P~~F~~~L~~ 243 (338) +.+++++|| +.||+.|-+.|.. T Consensus 172 ~~~~l~lSATl~n~~~~~~~l~~ 194 (202) T d2p6ra3 172 ALRVIGLSATAPNVTEIAEWLDA 194 (202) T ss_dssp TCEEEEEECCCTTHHHHHHHTTC T ss_pred CCCEEEECCCCCCHHHHHHHCCC T ss_conf 98389981788759999987089 No 184 >d1y63a_ c.37.1.1 (A:) Probable kinase LmjF30.1890 {Leishmania major [TaxId: 5664]} Probab=36.55 E-value=5.6 Score=17.24 Aligned_cols=25 Identities=40% Similarity=0.480 Sum_probs=18.1 Q ss_pred CCEEEECCEEECCCCCCHHHHHHHHHHH Q ss_conf 9889982300078887489999999985 Q gi|254780401|r 44 IPVICVGGFVMGGTGKTPTALAIAKAVI 71 (338) Q Consensus 44 ~pVI~VGNitvGGtGKTP~v~~l~~~l~ 71 (338) +-|+..|. -|+|||-++..|++.|. T Consensus 6 ~~I~i~G~---~GsGKTT~~~~La~~l~ 30 (174) T d1y63a_ 6 INILITGT---PGTGKTSMAEMIAAELD 30 (174) T ss_dssp CEEEEECS---TTSSHHHHHHHHHHHST T ss_pred CEEEEEEC---CCCCHHHHHHHHHHHHC T ss_conf 88999828---99988999999999858 No 185 >d1e32a2 c.37.1.20 (A:201-458) Membrane fusion ATPase VCP/p97 {Mouse (Mus musculus) [TaxId: 10090]} Probab=36.14 E-value=6.1 Score=16.96 Aligned_cols=33 Identities=30% Similarity=0.307 Sum_probs=21.0 Q ss_pred CCCEEEECCEEECCCCCCHHHHHHHHHHHHCCCCEEEEE Q ss_conf 898899823000788874899999999852473159876 Q gi|254780401|r 43 PIPVICVGGFVMGGTGKTPTALAIAKAVIDKNLKPGFLS 81 (338) Q Consensus 43 ~~pVI~VGNitvGGtGKTP~v~~l~~~l~~~g~~~~ils 81 (338) |--|+-.|- =|||||-++.++++.+ +.....++ T Consensus 38 ~~giLL~Gp---pGtGKT~l~~ala~~~---~~~~~~i~ 70 (258) T d1e32a2 38 PRGILLYGP---PGTGKTLIARAVANET---GAFFFLIN 70 (258) T ss_dssp CCEEEEECC---TTSSHHHHHHHHHHHT---TCEEEEEC T ss_pred CCEEEEECC---CCCCCHHHHHHHHHHH---CCEEEEEE T ss_conf 864687669---9888308999999874---88379997 No 186 >d1e2ka_ c.37.1.1 (A:) Thymidine kinase {Herpes simplex virus type 1, different strains [TaxId: 10298]} Probab=36.12 E-value=5.7 Score=17.17 Aligned_cols=23 Identities=26% Similarity=0.234 Sum_probs=17.7 Q ss_pred EECCEEECCCCCCHHHHHHHHHHHHC Q ss_conf 98230007888748999999998524 Q gi|254780401|r 48 CVGGFVMGGTGKTPTALAIAKAVIDK 73 (338) Q Consensus 48 ~VGNitvGGtGKTP~v~~l~~~l~~~ 73 (338) .=||+ |+|||-++..|++.+... T Consensus 9 IEG~i---GsGKTTl~~~La~~l~~~ 31 (329) T d1e2ka_ 9 IDGPH---GMGKTTTTQLLVALGSRD 31 (329) T ss_dssp ECSCT---TSSHHHHHHHHTC----C T ss_pred EECCC---CCCHHHHHHHHHHHHCCC T ss_conf 98986---778999999999981779 No 187 >d3raba_ c.37.1.8 (A:) Rab3a {Rat (Rattus norvegicus) [TaxId: 10116]} Probab=36.05 E-value=10 Score=15.34 Aligned_cols=22 Identities=23% Similarity=0.440 Sum_probs=16.0 Q ss_pred CCEEEECCEEECCCCCCHHHHHHHH Q ss_conf 9889982300078887489999999 Q gi|254780401|r 44 IPVICVGGFVMGGTGKTPTALAIAK 68 (338) Q Consensus 44 ~pVI~VGNitvGGtGKTP~v~~l~~ 68 (338) ..|+.||. .|+|||-++..++. T Consensus 6 ~Ki~vvG~---~~vGKTsLi~~l~~ 27 (169) T d3raba_ 6 FKILIIGN---SSVGKTSFLFRYAD 27 (169) T ss_dssp EEEEEECS---TTSSHHHHHHHHHH T ss_pred EEEEEECC---CCCCHHHHHHHHHC T ss_conf 89999999---99198999999973 No 188 >d1xhfa1 c.23.1.1 (A:2-122) Aerobic respiration control protein ArcA, N-terminal domain {Escherichia coli [TaxId: 562]} Probab=35.80 E-value=11 Score=15.08 Aligned_cols=17 Identities=6% Similarity=0.106 Sum_probs=8.9 Q ss_pred EEEEEECCCCHHHHHHH Q ss_conf 38987415535789998 Q gi|254780401|r 224 KVLAFSGIADTEKFFTT 240 (338) Q Consensus 224 ~v~afsGIa~P~~F~~~ 240 (338) .++++||-++++.-.+. T Consensus 75 pii~lt~~~~~~~~~~a 91 (121) T d1xhfa1 75 ALMFLTGRDNEVDKILG 91 (121) T ss_dssp EEEEEESCCSHHHHHHH T ss_pred CEEEEECCCCHHHHHHH T ss_conf 59999888999999999 No 189 >d2iyva1 c.37.1.2 (A:2-166) Shikimate kinase (AroK) {Mycobacterium tuberculosis [TaxId: 1773]} Probab=35.54 E-value=7.4 Score=16.41 Aligned_cols=22 Identities=36% Similarity=0.529 Sum_probs=17.4 Q ss_pred EEEECCEEECCCCCCHHHHHHHHHH Q ss_conf 8998230007888748999999998 Q gi|254780401|r 46 VICVGGFVMGGTGKTPTALAIAKAV 70 (338) Q Consensus 46 VI~VGNitvGGtGKTP~v~~l~~~l 70 (338) ||-+|- -|+|||-+...|++.| T Consensus 4 IvliG~---~G~GKSTig~~La~~l 25 (165) T d2iyva1 4 AVLVGL---PGSGKSTIGRRLAKAL 25 (165) T ss_dssp EEEECS---TTSSHHHHHHHHHHHH T ss_pred EEEECC---CCCCHHHHHHHHHHHH T ss_conf 899889---9998899999999984 No 190 >d1qkka_ c.23.1.1 (A:) Transcriptional regulatory protein DctD, receiver domain {Sinorhizobium meliloti [TaxId: 382]} Probab=35.26 E-value=12 Score=15.02 Aligned_cols=25 Identities=16% Similarity=0.080 Sum_probs=11.6 Q ss_pred CCCCCCHHHHHHHHCCCCCCEEEEC Q ss_conf 3465201225664102457479971 Q gi|254780401|r 117 TIVTSDRKIGVQMLLQEGVDIIIMD 141 (338) Q Consensus 117 v~V~~~R~~~~~~~~~~~~diiIlD 141 (338) |..+.+=.+|...+.+..+|+||+| T Consensus 27 v~~~~~~~~al~~l~~~~~dlil~D 51 (140) T d1qkka_ 27 VSSFASATEALAGLSADFAGIVISD 51 (140) T ss_dssp EEEESCHHHHHHTCCTTCCSEEEEE T ss_pred EEEECCHHHHHHHHHCCCCCHHHHH T ss_conf 9982774789999745585167776 No 191 >d1tzfa_ c.68.1.13 (A:) Glucose-1-phosphate cytidylyltransferase RfbF {Salmonella typhimurium [TaxId: 90371]} Probab=35.22 E-value=12 Score=15.01 Aligned_cols=39 Identities=26% Similarity=0.408 Sum_probs=31.9 Q ss_pred CCCCCCEEEECCEEECCCCCCHHHHHHHHHHHHCCCCEEEEEECCCC Q ss_conf 33889889982300078887489999999985247315987604578 Q gi|254780401|r 40 LHAPIPVICVGGFVMGGTGKTPTALAIAKAVIDKNLKPGFLSRGYGR 86 (338) Q Consensus 40 ~~~~~pVI~VGNitvGGtGKTP~v~~l~~~l~~~g~~~~ilsRGYg~ 86 (338) ...|-|.|-|+|- |+..+..+.|++.|.+-.++-.||++ T Consensus 21 ~~~PK~Ll~i~gk--------plI~~~i~~l~~~gi~~i~iv~gy~~ 59 (259) T d1tzfa_ 21 IVKPKPMVEIGGK--------PILWHIMKMYSVHGIKDFIICCGYKG 59 (259) T ss_dssp -CCCGGGCEETTE--------EHHHHHHHHHHHTTCCEEEEEECTTH T ss_pred CCCCCCCEEECCE--------EHHHHHHHHHHHCCCCEEEECCCHHH T ss_conf 7998101499999--------99999999999839974531200217 No 192 >d1jjva_ c.37.1.1 (A:) Dephospho-CoA kinase {Haemophilus influenzae [TaxId: 727]} Probab=35.16 E-value=7.3 Score=16.43 Aligned_cols=23 Identities=39% Similarity=0.589 Sum_probs=15.2 Q ss_pred EECCEEECCCCCCHHHHHHHHHHHHCCCCE Q ss_conf 982300078887489999999985247315 Q gi|254780401|r 48 CVGGFVMGGTGKTPTALAIAKAVIDKNLKP 77 (338) Q Consensus 48 ~VGNitvGGtGKTP~v~~l~~~l~~~g~~~ 77 (338) ..|++ |||||- ++++|++.|+.+ T Consensus 7 ITG~i---gSGKSt----v~~~l~~~G~~v 29 (205) T d1jjva_ 7 LTGGI---GSGKTT----IANLFTDLGVPL 29 (205) T ss_dssp EECST---TSCHHH----HHHHHHTTTCCE T ss_pred EECCC---CCCHHH----HHHHHHHCCCEE T ss_conf 88888---788999----999999879939 No 193 >d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]} Probab=34.94 E-value=12 Score=14.98 Aligned_cols=31 Identities=26% Similarity=0.305 Sum_probs=24.6 Q ss_pred EEECCCCCCHHHHHHHHHHHHCCCCEEEEEE Q ss_conf 0007888748999999998524731598760 Q gi|254780401|r 52 FVMGGTGKTPTALAIAKAVIDKNLKPGFLSR 82 (338) Q Consensus 52 itvGGtGKTP~v~~l~~~l~~~g~~~~ilsR 82 (338) |.+||+|-.=+-..+|+.|.+.|.+|.+..| T Consensus 9 lITGass~~GIG~aiA~~l~~~G~~V~i~~~ 39 (258) T d1qsga_ 9 LVTGVASKLSIAYGIAQAMHREGAELAFTYQ 39 (258) T ss_dssp EECCCCSTTSHHHHHHHHHHHTTCEEEEEES T ss_pred EEECCCCCHHHHHHHHHHHHHCCCEEEEEEC T ss_conf 9989998511899999999986999999958 No 194 >d3coxa1 c.3.1.2 (A:5-318,A:451-506) Cholesterol oxidase of GMC family {Brevibacterium sterolicum [TaxId: 1702]} Probab=34.57 E-value=7.6 Score=16.32 Aligned_cols=32 Identities=16% Similarity=0.310 Sum_probs=25.4 Q ss_pred CCEEEECCEEECCCCCCHHHHHHHHHHHHCCCCEEEEEEC Q ss_conf 9889982300078887489999999985247315987604 Q gi|254780401|r 44 IPVICVGGFVMGGTGKTPTALAIAKAVIDKNLKPGFLSRG 83 (338) Q Consensus 44 ~pVI~VGNitvGGtGKTP~v~~l~~~l~~~g~~~~ilsRG 83 (338) ++||.||.=..| ..+|..|.+.|++|.+|=|| T Consensus 8 ~dvIVVGsG~aG--------~v~A~rLaeaG~~VlvLEaG 39 (370) T d3coxa1 8 VPALVIGSGYGG--------AVAALRLTQAGIPTQIVEMG 39 (370) T ss_dssp EEEEEECCSHHH--------HHHHHHHHHTTCCEEEECSS T ss_pred CCEEEECCCHHH--------HHHHHHHHHCCCEEEEEECC T ss_conf 979997847899--------99999998787939999678 No 195 >d1tk9a_ c.80.1.3 (A:) Phosphoheptose isomerase GmhA1 {Campylobacter jejuni [TaxId: 197]} Probab=34.33 E-value=12 Score=14.92 Aligned_cols=12 Identities=0% Similarity=-0.139 Sum_probs=4.3 Q ss_pred HHHHHCCCCCCE Q ss_conf 566410245747 Q gi|254780401|r 126 GVQMLLQEGVDI 137 (338) Q Consensus 126 ~~~~~~~~~~di 137 (338) +++++.+.+..+ T Consensus 129 a~~~Ak~~g~~t 140 (188) T d1tk9a_ 129 ALKKAKELNMLC 140 (188) T ss_dssp HHHHHHHTTCEE T ss_pred HHHHHHHHCCEE T ss_conf 889998511538 No 196 >d1x1ra1 c.37.1.8 (A:10-178) Ras-related protein M-Ras (XRas) {Mouse (Mus musculus) [TaxId: 10090]} Probab=33.50 E-value=12 Score=14.87 Aligned_cols=20 Identities=30% Similarity=0.664 Sum_probs=14.3 Q ss_pred CEEEECCEEECCCCCCHHHHHHH Q ss_conf 88998230007888748999999 Q gi|254780401|r 45 PVICVGGFVMGGTGKTPTALAIA 67 (338) Q Consensus 45 pVI~VGNitvGGtGKTP~v~~l~ 67 (338) .|+.||+ .|+|||-++..++ T Consensus 6 Ki~lvG~---~~vGKTsll~~~~ 25 (169) T d1x1ra1 6 KLVVVGD---GGVGKSALTIQFF 25 (169) T ss_dssp EEEEECC---TTSSHHHHHHHHH T ss_pred EEEEECC---CCCCHHHHHHHHH T ss_conf 9999998---9959899999997 No 197 >d1z3ix2 c.37.1.19 (X:92-389) Rad54-like, Rad54L {Zebra fish (Danio rerio) [TaxId: 7955]} Probab=33.15 E-value=12 Score=14.79 Aligned_cols=19 Identities=21% Similarity=0.454 Sum_probs=15.9 Q ss_pred CCCCCHHHHHHHHHHHHCC Q ss_conf 8887489999999985247 Q gi|254780401|r 56 GTGKTPTALAIAKAVIDKN 74 (338) Q Consensus 56 GtGKTP~v~~l~~~l~~~g 74 (338) |+|||=.++.++..+.+++ T Consensus 89 GlGKT~qaia~l~~l~~~~ 107 (298) T d1z3ix2 89 GLGKTLQCITLIWTLLKQS 107 (298) T ss_dssp TSCHHHHHHHHHHHHHHCC T ss_pred CCCHHHHHHHHHHHHHHHC T ss_conf 7889999999999999846 No 198 >d1foba_ c.1.8.3 (A:) Beta-1,4-galactanase {Fungus (Aspergillus aculeatus) [TaxId: 5053]} Probab=33.03 E-value=12 Score=14.77 Aligned_cols=65 Identities=11% Similarity=-0.024 Sum_probs=36.8 Q ss_pred CEEEEEECCCCH----HHHHHHHHHHC------CCCCCCCCCCCCC-CCCHHHHHH-HHHHHHHCCCEEEECHHHHH Q ss_conf 638987415535----78999887401------0000122143323-489899999-99975647987998546634 Q gi|254780401|r 223 KKVLAFSGIADT----EKFFTTVRQLG------ALIEQCYSFGDHA-HLSDKKIAY-LLDQAQQKGLILVTTAKDAM 287 (338) Q Consensus 223 k~v~afsGIa~P----~~F~~~L~~~g------~~i~~~~~fpDHh-~ys~~dl~~-i~~~a~~~~~~iiTTEKD~V 287 (338) .++.+..+-|.+ ..|++.+...| +.++....||.=| ..+..++.. +...+.+.+.+++.+|=-+. T Consensus 174 ~~i~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~Dvig~syYp~w~~~~~l~~l~~~l~~l~~~y~k~v~I~Et~~~ 250 (334) T d1foba_ 174 PKIMIHLDDGWSWDQQNYFYETVLATGELLSTDFDYFGVSYYPFYSASATLASLKTSLANLQSTYDKPVVVVETNWP 250 (334) T ss_dssp CEEEEEESCTTCHHHHHHHHHHHHHTSSSCGGGCCEEEEECCSSSCTTCCHHHHHHHHHHHHHHHCCCEEEEECCCC T ss_pred CCEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCC T ss_conf 31344014678704667999999962787787767688742788888554999999999999970986178873156 No 199 >d2bcjq2 c.37.1.8 (Q:38-66,Q:184-354) Transducin (alpha subunit) {Mouse (Mus musculus) [TaxId: 10090]} Probab=32.86 E-value=9.3 Score=15.68 Aligned_cols=22 Identities=18% Similarity=0.392 Sum_probs=16.1 Q ss_pred CCEEEECCEEECCCCCCHHHHHHHH Q ss_conf 9889982300078887489999999 Q gi|254780401|r 44 IPVICVGGFVMGGTGKTPTALAIAK 68 (338) Q Consensus 44 ~pVI~VGNitvGGtGKTP~v~~l~~ 68 (338) +.||.+|. +|+|||-++..+.. T Consensus 3 ~Kiv~lG~---~~vGKTsll~r~~~ 24 (200) T d2bcjq2 3 LKLLLLGT---GESGKSTFIKQMRI 24 (200) T ss_dssp EEEEEEES---TTSSHHHHHHHHHH T ss_pred EEEEEECC---CCCCHHHHHHHHHC T ss_conf 59999999---99988999999967 No 200 >d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Probab=32.83 E-value=13 Score=14.75 Aligned_cols=32 Identities=19% Similarity=0.259 Sum_probs=21.1 Q ss_pred CEEECCCCCCHHHHHHHHHHHHCCCCEEEEEECC Q ss_conf 3000788874899999999852473159876045 Q gi|254780401|r 51 GFVMGGTGKTPTALAIAKAVIDKNLKPGFLSRGY 84 (338) Q Consensus 51 NitvGGtGKTP~v~~l~~~l~~~g~~~~ilsRGY 84 (338) |+.+-|+|++=. .+|++|.++|+++.|+-|-- T Consensus 4 ~IliiGaG~~G~--~~a~~L~~~g~~V~v~dr~~ 35 (182) T d1e5qa1 4 SVLMLGSGFVTR--PTLDVLTDSGIKVTVACRTL 35 (182) T ss_dssp EEEEECCSTTHH--HHHHHHHTTTCEEEEEESCH T ss_pred EEEEECCCHHHH--HHHHHHHHCCCEEEEEECCH T ss_conf 799987879999--99999984979799998974 No 201 >d2atva1 c.37.1.8 (A:5-172) Ras-like estrogen-regulated growth inhibitor, RERG {Human (Homo sapiens) [TaxId: 9606]} Probab=32.79 E-value=10 Score=15.32 Aligned_cols=22 Identities=18% Similarity=0.397 Sum_probs=15.8 Q ss_pred CCCEEEECCEEECCCCCCHHHHHHH Q ss_conf 8988998230007888748999999 Q gi|254780401|r 43 PIPVICVGGFVMGGTGKTPTALAIA 67 (338) Q Consensus 43 ~~pVI~VGNitvGGtGKTP~v~~l~ 67 (338) .+.|+.||+ .|+|||-++..++ T Consensus 2 eiKi~lvG~---~~vGKTsli~r~~ 23 (168) T d2atva1 2 EVKLAIFGR---AGVGKSALVVRFL 23 (168) T ss_dssp CEEEEEECC---TTSSHHHHHHHHH T ss_pred CEEEEEECC---CCCCHHHHHHHHH T ss_conf 679999998---9978999999997 No 202 >d1f20a2 c.25.1.4 (A:1233-1397) Neuronal nitric-oxide synthase FAD/NADP+ domain {Rat (Rattus norvegicus) [TaxId: 10116]} Probab=32.78 E-value=13 Score=14.75 Aligned_cols=48 Identities=8% Similarity=0.093 Sum_probs=27.1 Q ss_pred CEEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCE Q ss_conf 63898741553578999887401000012214332348989999999975647987 Q gi|254780401|r 223 KKVLAFSGIADTEKFFTTVRQLGALIEQCYSFGDHAHLSDKKIAYLLDQAQQKGLI 278 (338) Q Consensus 223 k~v~afsGIa~P~~F~~~L~~~g~~i~~~~~fpDHh~ys~~dl~~i~~~a~~~~~~ 278 (338) ...+-+|| |..+.+.+++.=.+ .+-.|-.++..+.+...+..++.+-. T Consensus 111 ~~~~yiCG---p~~M~~~v~~~L~~-----i~~~~~~~~~~~a~~~~~~l~~~~r~ 158 (165) T d1f20a2 111 GGHIYVCG---DVTMAADVLKAIQR-----IMTQQGKLSEEDAGVFISRLRDDNRY 158 (165) T ss_dssp CCEEEEEE---CHHHHHHHHHHHHH-----HHHHHTTCCHHHHHHHHHHHHHTTCE T ss_pred CCEEEEEC---CCCHHHHHHHHHHH-----HHHHHCCCCHHHHHHHHHHHHHCCCE T ss_conf 95899978---83048999999999-----99985599999999999999987988 No 203 >d1r6bx2 c.37.1.20 (X:169-436) ClpA, an Hsp100 chaperone, AAA+ modules {Escherichia coli [TaxId: 562]} Probab=32.70 E-value=13 Score=14.74 Aligned_cols=27 Identities=30% Similarity=0.347 Sum_probs=22.5 Q ss_pred CCEEEECCEEECCCCCCHHHHHHHHHHHHC Q ss_conf 988998230007888748999999998524 Q gi|254780401|r 44 IPVICVGGFVMGGTGKTPTALAIAKAVIDK 73 (338) Q Consensus 44 ~pVI~VGNitvGGtGKTP~v~~l~~~l~~~ 73 (338) -.++-||.- |+|||-+|..||+.+.+. T Consensus 40 ~n~lLVG~~---GvGKTalv~~la~ri~~~ 66 (268) T d1r6bx2 40 NNPLLVGES---GVGKTAIAEGLAWRIVQG 66 (268) T ss_dssp CEEEEECCT---TSSHHHHHHHHHHHHHHT T ss_pred CCCEEECCC---CCCHHHHHHHHHHHHHHC T ss_conf 896798889---886779999999999817 No 204 >d1zp6a1 c.37.1.25 (A:6-181) Hypothetical protein Atu3015 {Agrobacterium tumefaciens [TaxId: 358]} Probab=32.57 E-value=6.3 Score=16.86 Aligned_cols=24 Identities=25% Similarity=0.303 Sum_probs=15.1 Q ss_pred CCCCCCHHHHHHHHHHHHCCCCEEEEE Q ss_conf 788874899999999852473159876 Q gi|254780401|r 55 GGTGKTPTALAIAKAVIDKNLKPGFLS 81 (338) Q Consensus 55 GGtGKTP~v~~l~~~l~~~g~~~~ils 81 (338) =|||||-++..|++.+ |.....++ T Consensus 13 ~GsGKSTia~~La~~l---g~~~~~~~ 36 (176) T d1zp6a1 13 PGSGKSTIAEALANLP---GVPKVHFH 36 (176) T ss_dssp TTSCHHHHHHHHHTCS---SSCEEEEC T ss_pred CCCCHHHHHHHHHHHH---CCCEEEEC T ss_conf 9998899999999995---99979906 No 205 >d1jbka_ c.37.1.20 (A:) ClpB, AAA+ modules {Escherichia coli [TaxId: 562]} Probab=32.03 E-value=9.6 Score=15.57 Aligned_cols=27 Identities=26% Similarity=0.395 Sum_probs=21.8 Q ss_pred CCEEEECCEEECCCCCCHHHHHHHHHHHHC Q ss_conf 988998230007888748999999998524 Q gi|254780401|r 44 IPVICVGGFVMGGTGKTPTALAIAKAVIDK 73 (338) Q Consensus 44 ~pVI~VGNitvGGtGKTP~v~~l~~~l~~~ 73 (338) -.+|-||.- |+|||-+|.-||+.+.+. T Consensus 44 ~n~lLvG~p---GVGKTalv~~LA~ri~~~ 70 (195) T d1jbka_ 44 NNPVLIGEP---GVGKTAIVEGLAQRIING 70 (195) T ss_dssp CEEEEECCT---TSCHHHHHHHHHHHHHHT T ss_pred CCEEEEECC---CCCCHHHHHHHHHHHHHC T ss_conf 873998358---754479999999999808 No 206 >d1p5zb_ c.37.1.1 (B:) Deoxycytidine kinase {Human (Homo sapiens) [TaxId: 9606]} Probab=31.92 E-value=1.8 Score=20.71 Aligned_cols=30 Identities=17% Similarity=0.209 Sum_probs=21.8 Q ss_pred EECCEEECCCCCCHHHHHHHHHHHHCCCCEEEE Q ss_conf 982300078887489999999985247315987 Q gi|254780401|r 48 CVGGFVMGGTGKTPTALAIAKAVIDKNLKPGFL 80 (338) Q Consensus 48 ~VGNitvGGtGKTP~v~~l~~~l~~~g~~~~il 80 (338) .-|+. |+|||-++..|++.|.+.++.+... T Consensus 7 ieG~d---GsGKST~~~~L~~~l~~~~~~~e~~ 36 (241) T d1p5zb_ 7 IEGNI---AAGKSTFVNILKQLCEDWEVVPEPV 36 (241) T ss_dssp EECST---TSSHHHHHTTTGGGCTTEEEECCCH T ss_pred EECCC---CCCHHHHHHHHHHHHHCCCCEEEEE T ss_conf 98788---8779999999999973589836663 No 207 >d2erxa1 c.37.1.8 (A:6-176) di-Ras2 {Human (Homo sapiens) [TaxId: 9606]} Probab=31.61 E-value=11 Score=15.24 Aligned_cols=20 Identities=35% Similarity=0.619 Sum_probs=14.5 Q ss_pred CEEEECCEEECCCCCCHHHHHHH Q ss_conf 88998230007888748999999 Q gi|254780401|r 45 PVICVGGFVMGGTGKTPTALAIA 67 (338) Q Consensus 45 pVI~VGNitvGGtGKTP~v~~l~ 67 (338) .|+.||+ .|+|||-++..++ T Consensus 4 Ki~viG~---~~vGKTsLi~r~~ 23 (171) T d2erxa1 4 RVAVFGA---GGVGKSSLVLRFV 23 (171) T ss_dssp EEEEECC---TTSSHHHHHHHHH T ss_pred EEEEECC---CCCCHHHHHHHHH T ss_conf 8999998---9979899999997 No 208 >d1vzya2 g.81.1.1 (A:234-290) HSP33, C-terminal domain {Bacillus subtilis [TaxId: 1423]} Probab=31.55 E-value=13 Score=14.61 Aligned_cols=39 Identities=13% Similarity=0.197 Sum_probs=26.4 Q ss_pred HHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHH Q ss_conf 578999887401000012214332348989999999975 Q gi|254780401|r 234 TEKFFTTVRQLGALIEQCYSFGDHAHLSDKKIAYLLDQA 272 (338) Q Consensus 234 P~~F~~~L~~~g~~i~~~~~fpDHh~ys~~dl~~i~~~a 272 (338) ++-..+++.+.|---+....-.-+|.|+..|++.|++++ T Consensus 18 ~~el~~~~~e~g~iev~C~fC~~~Y~f~~~dl~~l~~~~ 56 (57) T d1vzya2 18 KKEIQDMIEEDGQAEAVCHFCNEKYLFTKEELEGLRDQT 56 (57) T ss_dssp HHHHHHHHHHHSEEEEECTTTCCEEEEEHHHHHHHHHHC T ss_pred HHHHHHHHHCCCCEEEEEECCCCEEEECHHHHHHHHHCC T ss_conf 999999997399789980187998878999999998643 No 209 >d1vjpa2 d.81.1.3 (A:210-316) Hypothetical protein TM1419 {Thermotoga maritima [TaxId: 2336]} Probab=31.19 E-value=12 Score=14.95 Aligned_cols=33 Identities=18% Similarity=0.196 Sum_probs=24.8 Q ss_pred CCCCCHHHHHHHHHHHHCCCCEE-EEEECCCCCC Q ss_conf 88874899999999852473159-8760457877 Q gi|254780401|r 56 GTGKTPTALAIAKAVIDKNLKPG-FLSRGYGRKS 88 (338) Q Consensus 56 GtGKTP~v~~l~~~l~~~g~~~~-ilsRGYg~~~ 88 (338) .||-|.+--.|+.+|.++|.+|- +.|---+|.. T Consensus 1 ~tG~T~~~~~La~~~~~Rg~kv~~~~q~N~~GN~ 34 (107) T d1vjpa2 1 ATGATPFTADVLSHLAQRNRYVKDVAQFNIGGNM 34 (107) T ss_dssp SCSHHHHHHHHHHHHHHTTCEEEEEEEEEEECCG T ss_pred CCCCCHHHHHHHHHHHHCCCCEEEEEEEEECCCH T ss_conf 9872248999999999869950479988515761 No 210 >d1trea_ c.1.1.1 (A:) Triosephosphate isomerase {Escherichia coli [TaxId: 562]} Probab=31.14 E-value=12 Score=14.93 Aligned_cols=11 Identities=18% Similarity=0.746 Sum_probs=5.3 Q ss_pred EEECCEEECCC Q ss_conf 99823000788 Q gi|254780401|r 47 ICVGGFVMGGT 57 (338) Q Consensus 47 I~VGNitvGGt 57 (338) |.+||--+=|| T Consensus 5 iIigNWKMN~~ 15 (255) T d1trea_ 5 LVMGNWKLNGS 15 (255) T ss_dssp EEEEECCBCCC T ss_pred EEEEECCCCCC T ss_conf 89998131799 No 211 >d1rifa_ c.37.1.23 (A:) DNA helicase UvsW {Bacteriophage T4 [TaxId: 10665]} Probab=31.06 E-value=13 Score=14.55 Aligned_cols=25 Identities=16% Similarity=-0.067 Sum_probs=18.1 Q ss_pred CCCCH--HHHHHHHHHHHCCCCEEEEE Q ss_conf 88748--99999999852473159876 Q gi|254780401|r 57 TGKTP--TALAIAKAVIDKNLKPGFLS 81 (338) Q Consensus 57 tGKTP--~v~~l~~~l~~~g~~~~ils 81 (338) +|.+| +..++.+.++++|++.-+.. T Consensus 57 ~~~~~~GL~~~i~~f~~~~~~~~~~~~ 83 (282) T d1rifa_ 57 NRLLPFGLVGQIKKFCDNFGYKAWIDP 83 (282) T ss_dssp TCEEEGGGGGGHHHHHHHTTCCEEECG T ss_pred CCCCCHHHHHHHHHHHHHCCCCEEEEC T ss_conf 333026899999999986377314302 No 212 >d1zina1 c.37.1.1 (A:1-125,A:161-217) Adenylate kinase {Bacillus stearothermophilus [TaxId: 1422]} Probab=30.91 E-value=9.7 Score=15.54 Aligned_cols=16 Identities=38% Similarity=0.389 Sum_probs=14.0 Q ss_pred CCCCCCHHHHHHHHHH Q ss_conf 7888748999999998 Q gi|254780401|r 55 GGTGKTPTALAIAKAV 70 (338) Q Consensus 55 GGtGKTP~v~~l~~~l 70 (338) =|+|||-.+..|++.+ T Consensus 9 pGSGKsT~a~~La~~~ 24 (182) T d1zina1 9 PGAGKGTQAEKIVAAY 24 (182) T ss_dssp TTSSHHHHHHHHHHHH T ss_pred CCCCHHHHHHHHHHHH T ss_conf 9999899999999987 No 213 >d2i1qa2 c.37.1.11 (A:65-322) DNA repair protein Rad51, catalytic domain {Archaeon Methanococcus voltae [TaxId: 2188]} Probab=30.71 E-value=5.5 Score=17.32 Aligned_cols=36 Identities=11% Similarity=-0.077 Sum_probs=25.7 Q ss_pred EEECCEEE----CCCCCCHHHHHHHHHHHHCCCCEEEEEE Q ss_conf 99823000----7888748999999998524731598760 Q gi|254780401|r 47 ICVGGFVM----GGTGKTPTALAIAKAVIDKNLKPGFLSR 82 (338) Q Consensus 47 I~VGNitv----GGtGKTP~v~~l~~~l~~~g~~~~ilsR 82 (338) +.-|.+++ .|+|||-++..+|-.+...+..+...+- T Consensus 31 l~~G~l~~i~G~~G~GKT~~~l~~a~~~~~~~~~~~~~~~ 70 (258) T d2i1qa2 31 LESQSVTEFAGVFGSGKTQIMHQSCVNLQNPEFLFYDEEA 70 (258) T ss_dssp EETTEEEEEEESTTSSHHHHHHHHHHHTTCGGGEECCTTT T ss_pred CCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCEEEEE T ss_conf 6288599999179999899999999999853797437753 No 214 >d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]} Probab=30.64 E-value=14 Score=14.51 Aligned_cols=29 Identities=14% Similarity=0.283 Sum_probs=22.8 Q ss_pred EEECCCCCCHHHHHHHHHHHHCCCCEEEEEE Q ss_conf 0007888748999999998524731598760 Q gi|254780401|r 52 FVMGGTGKTPTALAIAKAVIDKNLKPGFLSR 82 (338) Q Consensus 52 itvGGtGKTP~v~~l~~~l~~~g~~~~ilsR 82 (338) |.+|||| -+=-+|++.|.++|++|.++-| T Consensus 4 LVTGatG--fIGs~lv~~Ll~~g~~V~~id~ 32 (338) T d1orra_ 4 LITGGCG--FLGSNLASFALSQGIDLIVFDN 32 (338) T ss_dssp EEETTTS--HHHHHHHHHHHHTTCEEEEEEC T ss_pred EEECCCC--HHHHHHHHHHHHCCCEEEEEEC T ss_conf 9989872--8999999999978398999979 No 215 >d1mh1a_ c.37.1.8 (A:) Rac {Human (Homo sapiens) [TaxId: 9606]} Probab=30.61 E-value=11 Score=15.18 Aligned_cols=21 Identities=33% Similarity=0.543 Sum_probs=16.0 Q ss_pred CCEEEECCEEECCCCCCHHHHHHH Q ss_conf 988998230007888748999999 Q gi|254780401|r 44 IPVICVGGFVMGGTGKTPTALAIA 67 (338) Q Consensus 44 ~pVI~VGNitvGGtGKTP~v~~l~ 67 (338) +.|+.||. .|+|||-++..+. T Consensus 6 iKivviG~---~~vGKTsli~~~~ 26 (183) T d1mh1a_ 6 IKCVVVGD---GAVGKTCLLISYT 26 (183) T ss_dssp EEEEEECS---TTSSHHHHHHHHH T ss_pred EEEEEECC---CCCCHHHHHHHHH T ss_conf 99999999---9979999999997 No 216 >d1lvga_ c.37.1.1 (A:) Guanylate kinase {Mouse (Mus musculus) [TaxId: 10090]} Probab=30.60 E-value=14 Score=14.50 Aligned_cols=25 Identities=24% Similarity=0.349 Sum_probs=18.9 Q ss_pred CEEEECCEEECCCCCCHHHHHHHHHHHH Q ss_conf 8899823000788874899999999852 Q gi|254780401|r 45 PVICVGGFVMGGTGKTPTALAIAKAVID 72 (338) Q Consensus 45 pVI~VGNitvGGtGKTP~v~~l~~~l~~ 72 (338) |||.+|=- |+|||.+...|++.+-. T Consensus 2 pIvl~GPs---GsGK~tl~~~L~~~~~~ 26 (190) T d1lvga_ 2 PVVLSGPS---GAGKSTLLKKLFQEHSS 26 (190) T ss_dssp CEEEECCT---TSSHHHHHHHHHHHHTT T ss_pred EEEEECCC---CCCHHHHHHHHHHHCCC T ss_conf 19999999---99999999999974887 No 217 >d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]} Probab=30.43 E-value=5.6 Score=17.23 Aligned_cols=22 Identities=18% Similarity=0.212 Sum_probs=16.8 Q ss_pred EECCCCCCHHHHHHHHHHHHCCCCEE Q ss_conf 00788874899999999852473159 Q gi|254780401|r 53 VMGGTGKTPTALAIAKAVIDKNLKPG 78 (338) Q Consensus 53 tvGGtGKTP~v~~l~~~l~~~g~~~~ 78 (338) =+||+|-.+ ||++|+++|+.|. T Consensus 8 GIgG~GMs~----LA~~L~~~G~~Vs 29 (89) T d1j6ua1 8 GIGGIGMSA----VALHEFSNGNDVY 29 (89) T ss_dssp TTTSHHHHH----HHHHHHHTTCEEE T ss_pred EECHHHHHH----HHHHHHHCCCEEE T ss_conf 577899999----9999996899699 No 218 >d1gkma_ a.127.1.2 (A:) Histidine ammonia-lyase (HAL) {Pseudomonas putida [TaxId: 303]} Probab=30.41 E-value=14 Score=14.48 Aligned_cols=40 Identities=15% Similarity=0.236 Sum_probs=32.5 Q ss_pred EEEECCEEECCCCCCHHHHHHHHHHHHCCCCEEEEEECCC Q ss_conf 8998230007888748999999998524731598760457 Q gi|254780401|r 46 VICVGGFVMGGTGKTPTALAIAKAVIDKNLKPGFLSRGYG 85 (338) Q Consensus 46 VI~VGNitvGGtGKTP~v~~l~~~l~~~g~~~~ilsRGYg 85 (338) ++=+=++..|+||=.|-++-....+.++|..|+|=++|== T Consensus 101 ~~Rln~l~~G~SGV~~~~~~~L~~~lN~~v~P~VP~~GSv 140 (509) T d1gkma_ 101 VLKINSLSRGFSGIRRKVIDALIALVNAEVYPHIPLKGSV 140 (509) T ss_dssp HHHHHHHTTSCSCCCHHHHHHHHHHHHHTEEECCEEECCC T ss_pred HHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCC T ss_conf 9999985468887577899999999958972336687887 No 219 >d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]} Probab=30.12 E-value=14 Score=14.45 Aligned_cols=29 Identities=14% Similarity=0.188 Sum_probs=22.6 Q ss_pred EEECCCCCCHHHHHHHHHHHHCCCCEEEEEE Q ss_conf 0007888748999999998524731598760 Q gi|254780401|r 52 FVMGGTGKTPTALAIAKAVIDKNLKPGFLSR 82 (338) Q Consensus 52 itvGGtGKTP~v~~l~~~l~~~g~~~~ilsR 82 (338) +.+|||| -+=.+|++.|.++|+.+..+.| T Consensus 4 lItG~tG--fIG~~l~~~L~~~g~~v~~~~~ 32 (322) T d1r6da_ 4 LVTGGAG--FIGSHFVRQLLAGAYPDVPADE 32 (322) T ss_dssp EEETTTS--HHHHHHHHHHHHTSCTTSCCSE T ss_pred EEECCCC--HHHHHHHHHHHHCCCCCCCCCE T ss_conf 9988877--8999999999977997667765 No 220 >d3ceda1 d.58.18.13 (A:247-341) Methionine import ATP-binding protein MetN2 {Staphylococcus aureus [TaxId: 1280]} Probab=29.89 E-value=14 Score=14.42 Aligned_cols=23 Identities=26% Similarity=0.447 Sum_probs=9.5 Q ss_pred CCCCCCHHHHHHHHHHHHCCCCEEEE Q ss_conf 78887489999999985247315987 Q gi|254780401|r 55 GGTGKTPTALAIAKAVIDKNLKPGFL 80 (338) Q Consensus 55 GGtGKTP~v~~l~~~l~~~g~~~~il 80 (338) |.+...|+..-|++.+ |..+-|| T Consensus 26 G~~a~~Pvis~l~r~~---~v~vnIL 48 (95) T d3ceda1 26 GSTTTEPIVSSLSTAY---DIKINIL 48 (95) T ss_dssp EESCHHHHHHHHHHHH---TCCCEEE T ss_pred CCCCCCHHHHHHHHHH---CCCEEEE T ss_conf 8865851999999985---9963899 No 221 >d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} Probab=29.80 E-value=14 Score=14.41 Aligned_cols=29 Identities=10% Similarity=-0.047 Sum_probs=23.9 Q ss_pred EEECCCCCCHHHHHHHHHHHHCCCCEEEEEE Q ss_conf 0007888748999999998524731598760 Q gi|254780401|r 52 FVMGGTGKTPTALAIAKAVIDKNLKPGFLSR 82 (338) Q Consensus 52 itvGGtGKTP~v~~l~~~l~~~g~~~~ilsR 82 (338) |.+||++ -+=..+|+.|.+.|++|.+++| T Consensus 5 lITGas~--GIG~aiA~~la~~Ga~V~~~~~ 33 (257) T d1fjha_ 5 VISGCAT--GIGAATRKVLEAAGHQIVGIDI 33 (257) T ss_dssp EEETTTS--HHHHHHHHHHHHTTCEEEEEES T ss_pred EEECCCC--HHHHHHHHHHHHCCCEEEEEEC T ss_conf 9908888--9999999999987998999979 No 222 >d1pfka_ c.89.1.1 (A:) ATP-dependent phosphofructokinase {Escherichia coli [TaxId: 562]} Probab=29.78 E-value=14 Score=14.41 Aligned_cols=103 Identities=20% Similarity=0.321 Sum_probs=54.9 Q ss_pred ECCEEECCC--CCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCEEEECCCCCHHHHCCHHHHHHHCCCCCCCCCH--- Q ss_conf 823000788--874899999999852473159876045787777558714567887704212332205763465201--- Q gi|254780401|r 49 VGGFVMGGT--GKTPTALAIAKAVIDKNLKPGFLSRGYGRKSRISFRVDLEKHSAYDVGDEPLLLARRAVTIVTSDR--- 123 (338) Q Consensus 49 VGNitvGGt--GKTP~v~~l~~~l~~~g~~~~ilsRGYg~~~~~~~~v~~~~~~~~~vGDEp~lla~~~pv~V~~~R--- 123 (338) ||=+|.||- |=-..+..+++...+.|+++--+-.||.|-..+.+...+. .++.+ +.+..-.+.+..| T Consensus 5 IgIltsGG~~pg~Na~i~~~v~~~~~~~~~v~g~~~G~~Gl~~~~~~~l~~----~~v~~----~~~~gGs~lgt~R~~~ 76 (320) T d1pfka_ 5 IGVLTSGGDAPGMNAAIRGVVRSALTEGLEVMGIYDGYLGLYEDRMVQLDR----YSVSD----MINRGGTFLGSARFPE 76 (320) T ss_dssp EEEEECSSCCTTHHHHHHHHHHHHHHTTCEEEEESTHHHHHHTTCEEEECS----GGGTT----CTTCCSCTTCCCCCGG T ss_pred EEEECCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHCCCCEEECCH----HHHHH----HHHCCCCCCCCCCCCC T ss_conf 999866888668899999999999878998999946688872798572999----99988----9846998523147887 Q ss_pred -------HHHHHHHCCCCCCEEEE---CCCCCCCCCCC--EEEEEEEC Q ss_conf -------22566410245747997---18322344123--06999961 Q gi|254780401|r 124 -------KIGVQMLLQEGVDIIIM---DDGFHSADLQA--DFSLIVVN 159 (338) Q Consensus 124 -------~~~~~~~~~~~~diiIl---DDGfQh~~l~r--dl~Ivl~d 159 (338) .+.+..+.+.+.|.++. ||.++.-..-. .+.++.+. T Consensus 77 ~~~~~~~~~~~~~l~~~~I~~li~iGG~~s~~~a~~l~~~~~~vigiP 124 (320) T d1pfka_ 77 FRDENIRAVAIENLKKRGIDALVVIGGDGSYMGAMRLTEMGFPCIGLP 124 (320) T ss_dssp GGSHHHHHHHHHHHHHTTCCEEEEEECHHHHHHHHHHHHTTCCEEEEE T ss_pred CCCHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHCCCCEEEEE T ss_conf 766555503888998769988999679658999999875166522230 No 223 >d1s3ga1 c.37.1.1 (A:1-125,A:161-217) Adenylate kinase {Bacillus globisporus [TaxId: 1459]} Probab=29.76 E-value=10 Score=15.32 Aligned_cols=17 Identities=29% Similarity=0.370 Sum_probs=14.6 Q ss_pred ECCCCCCHHHHHHHHHH Q ss_conf 07888748999999998 Q gi|254780401|r 54 MGGTGKTPTALAIAKAV 70 (338) Q Consensus 54 vGGtGKTP~v~~l~~~l 70 (338) .-|+|||-.+..|++.| T Consensus 8 ~pGSGKsT~a~~La~~~ 24 (182) T d1s3ga1 8 LPGAGKGTQADRIVEKY 24 (182) T ss_dssp STTSSHHHHHHHHHHHH T ss_pred CCCCCHHHHHHHHHHHH T ss_conf 99998799999999987 No 224 >d2cdna1 c.37.1.1 (A:1-181) Adenylate kinase {Mycobacterium tuberculosis [TaxId: 1773]} Probab=29.72 E-value=10 Score=15.31 Aligned_cols=16 Identities=31% Similarity=0.542 Sum_probs=14.0 Q ss_pred CCCCCCHHHHHHHHHH Q ss_conf 7888748999999998 Q gi|254780401|r 55 GGTGKTPTALAIAKAV 70 (338) Q Consensus 55 GGtGKTP~v~~l~~~l 70 (338) =|||||-.+..|++.+ T Consensus 9 pGsGKsT~a~~La~~~ 24 (181) T d2cdna1 9 PGAGKGTQAVKLAEKL 24 (181) T ss_dssp TTSSHHHHHHHHHHHH T ss_pred CCCCHHHHHHHHHHHH T ss_conf 9999799999999998 No 225 >d1krwa_ c.23.1.1 (A:) NTRC receiver domain {Salmonella typhimurium [TaxId: 90371]} Probab=29.58 E-value=14 Score=14.38 Aligned_cols=25 Identities=12% Similarity=0.159 Sum_probs=11.1 Q ss_pred CCCCCCHHHHHHHHCCCCCCEEEEC Q ss_conf 3465201225664102457479971 Q gi|254780401|r 117 TIVTSDRKIGVQMLLQEGVDIIIMD 141 (338) Q Consensus 117 v~V~~~R~~~~~~~~~~~~diiIlD 141 (338) |.++.+-.+|...+.+..+|+||+| T Consensus 30 v~~a~~~~~a~~~l~~~~~dlii~D 54 (123) T d1krwa_ 30 CTTFENGNEVLAALASKTPDVLLSD 54 (123) T ss_dssp EEEESSSHHHHHHHTTCCCSEEEEC T ss_pred EEEECCHHHHHHHHHHCCCCEEEEH T ss_conf 9995888999999982788799865 No 226 >d1rrva_ c.87.1.5 (A:) TDP-vancosaminyltransferase GftD {Amycolatopsis orientalis [TaxId: 31958]} Probab=29.47 E-value=14 Score=14.37 Aligned_cols=28 Identities=18% Similarity=0.214 Sum_probs=21.3 Q ss_pred ECCC-C-CCHHHHHHHHHHHHCCCCEEEEEE Q ss_conf 0788-8-748999999998524731598760 Q gi|254780401|r 54 MGGT-G-KTPTALAIAKAVIDKNLKPGFLSR 82 (338) Q Consensus 54 vGGt-G-KTP~v~~l~~~l~~~g~~~~ilsR 82 (338) ++|| | =+|++ .||+.|.++|+.|.+++- T Consensus 7 ~~gt~Ghv~P~l-~lA~~L~~rGh~V~~~t~ 36 (401) T d1rrva_ 7 VCGTRGDVEIGV-ALADRLKALGVQTRMCAP 36 (401) T ss_dssp EESCHHHHHHHH-HHHHHHHHTTCEEEEEEC T ss_pred CCCCHHHHHHHH-HHHHHHHHCCCEEEEEEC T ss_conf 898756899999-999999987998999978 No 227 >d2pl1a1 c.23.1.1 (A:1-119) PhoP receiver domain {Escherichia coli [TaxId: 562]} Probab=29.28 E-value=12 Score=14.80 Aligned_cols=25 Identities=28% Similarity=0.127 Sum_probs=11.9 Q ss_pred CCCCCCHHHHHHHHCCCCCCEEEEC Q ss_conf 3465201225664102457479971 Q gi|254780401|r 117 TIVTSDRKIGVQMLLQEGVDIIIMD 141 (338) Q Consensus 117 v~V~~~R~~~~~~~~~~~~diiIlD 141 (338) |..+.+-.+|...+.+..+|+||+| T Consensus 27 v~~a~~g~eal~~l~~~~~dliilD 51 (119) T d2pl1a1 27 VDDAEDAKEADYYLNEHIPDIAIVD 51 (119) T ss_dssp EEEESSHHHHHHHHHHSCCSEEEEC T ss_pred EEEECCHHHHHHHHHHCCCCEEEHH T ss_conf 9997887999999983464555342 No 228 >d1gkya_ c.37.1.1 (A:) Guanylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Probab=29.26 E-value=14 Score=14.35 Aligned_cols=36 Identities=22% Similarity=0.304 Sum_probs=23.5 Q ss_pred CEEEECCEEECCCCCCHHHHHHHHHHHHC-CCCEEEEEEC Q ss_conf 88998230007888748999999998524-7315987604 Q gi|254780401|r 45 PVICVGGFVMGGTGKTPTALAIAKAVIDK-NLKPGFLSRG 83 (338) Q Consensus 45 pVI~VGNitvGGtGKTP~v~~l~~~l~~~-g~~~~ilsRG 83 (338) |||.+|=- |+|||-+...|++.+... .+-+..-+|. T Consensus 3 pIvl~Gps---G~GK~tl~~~L~~~~~~~~~~~~~~TTR~ 39 (186) T d1gkya_ 3 PIVISGPS---GTGKSTLLKKLFAEYPDSFGFSVSSTTRT 39 (186) T ss_dssp CEEEECCT---TSSHHHHHHHHHHHCTTTEEECCEEECSC T ss_pred EEEEECCC---CCCHHHHHHHHHHHCCCCEEEEEEECCCC T ss_conf 69998999---99989999999974886624777642689 No 229 >d1c4oa2 c.37.1.19 (A:410-583) Nucleotide excision repair enzyme UvrB {Thermus thermophilus [TaxId: 274]} Probab=29.04 E-value=14 Score=14.32 Aligned_cols=19 Identities=11% Similarity=-0.066 Sum_probs=7.4 Q ss_pred HHHHHCCCCCCEEEECCCC Q ss_conf 5664102457479971832 Q gi|254780401|r 126 GVQMLLQEGVDIIIMDDGF 144 (338) Q Consensus 126 ~~~~~~~~~~diiIlDDGf 144 (338) ..+...+-..+|++.=|.| T Consensus 73 ~l~~F~~G~~~vLVaT~v~ 91 (174) T d1c4oa2 73 LIRDLRLGHYDCLVGINLL 91 (174) T ss_dssp HHHHHHTTSCSEEEESCCC T ss_pred HHHHHHCCCEEEEEEEEEE T ss_conf 9999977986999963564 No 230 >d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]} Probab=28.89 E-value=15 Score=14.30 Aligned_cols=29 Identities=14% Similarity=0.274 Sum_probs=20.4 Q ss_pred EEECCCCCCHHHHHHHHHHHHCCCCEEEEEE Q ss_conf 0007888748999999998524731598760 Q gi|254780401|r 52 FVMGGTGKTPTALAIAKAVIDKNLKPGFLSR 82 (338) Q Consensus 52 itvGGtGKTP~v~~l~~~l~~~g~~~~ilsR 82 (338) +.+||||- +=.+|++.|.++|+.+-|+++ T Consensus 6 lItGatG~--iG~~lv~~L~~~~~~~~v~~~ 34 (212) T d2a35a1 6 LLAGATGL--TGEHLLDRILSEPTLAKVIAP 34 (212) T ss_dssp EEECTTSH--HHHHHHHHHHHCTTCCEEECC T ss_pred EEECCCCH--HHHHHHHHHHHCCCEEEEEEE T ss_conf 99889848--999999999968895799997 No 231 >d2h1ia1 c.69.1.14 (A:1-202) Carboxylesterase {Bacillus cereus [TaxId: 1396]} Probab=28.87 E-value=15 Score=14.30 Aligned_cols=51 Identities=16% Similarity=0.122 Sum_probs=37.3 Q ss_pred CCEEEEEECCCCH-------HHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHH Q ss_conf 8638987415535-------789998874010000122143323489899999999756 Q gi|254780401|r 222 GKKVLAFSGIADT-------EKFFTTVRQLGALIEQCYSFGDHAHLSDKKIAYLLDQAQ 273 (338) Q Consensus 222 ~k~v~afsGIa~P-------~~F~~~L~~~g~~i~~~~~fpDHh~ys~~dl~~i~~~a~ 273 (338) ...+..+.|-.|| +.+.+.|++.|+++ ....||.-|.++..+++.+.+-.+ T Consensus 142 ~~~~~i~~G~~D~~vp~~~~~~~~~~l~~~g~~~-~~~~~~ggH~~~~~~~~~~~~wl~ 199 (202) T d2h1ia1 142 GKSVFIAAGTNDPICSSAESEELKVLLENANANV-TMHWENRGHQLTMGEVEKAKEWYD 199 (202) T ss_dssp TCEEEEEEESSCSSSCHHHHHHHHHHHHTTTCEE-EEEEESSTTSCCHHHHHHHHHHHH T ss_pred CCHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCE-EEEEECCCCCCCHHHHHHHHHHHH T ss_conf 2011124436888549999999999999789987-999989999689999999999999 No 232 >d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]} Probab=28.82 E-value=15 Score=14.30 Aligned_cols=29 Identities=21% Similarity=0.249 Sum_probs=22.8 Q ss_pred EEECCCCCCHHHHHHHHHHHHCCCCEEEEEE Q ss_conf 0007888748999999998524731598760 Q gi|254780401|r 52 FVMGGTGKTPTALAIAKAVIDKNLKPGFLSR 82 (338) Q Consensus 52 itvGGtGKTP~v~~l~~~l~~~g~~~~ilsR 82 (338) |.+|||| =+=-+|++.|.++|+.+.++.+ T Consensus 6 lITG~tG--fiG~~l~~~L~~~g~~vi~~~~ 34 (315) T d1e6ua_ 6 FIAGHRG--MVGSAIRRQLEQRGDVELVLRT 34 (315) T ss_dssp EEETTTS--HHHHHHHHHHTTCTTEEEECCC T ss_pred EEECCCC--HHHHHHHHHHHHCCCEEEEECC T ss_conf 9985872--8999999999978498999657 No 233 >d1mvoa_ c.23.1.1 (A:) PhoP receiver domain {Bacillus subtilis [TaxId: 1423]} Probab=28.37 E-value=12 Score=14.91 Aligned_cols=26 Identities=27% Similarity=0.351 Sum_probs=13.4 Q ss_pred CCCCCCCHHHHHHHHCCCCCCEEEEC Q ss_conf 63465201225664102457479971 Q gi|254780401|r 116 VTIVTSDRKIGVQMLLQEGVDIIIMD 141 (338) Q Consensus 116 pv~V~~~R~~~~~~~~~~~~diiIlD 141 (338) -|.++.+-.+|...+.+..+|+||+| T Consensus 28 ~v~~a~~~~~al~~l~~~~~dlillD 53 (121) T d1mvoa_ 28 DVITASDGEEALKKAETEKPDLIVLD 53 (121) T ss_dssp EEEEESSHHHHHHHHHHHCCSEEEEE T ss_pred EEEEECCHHHHHHHHHCCCCCEEEEC T ss_conf 99998788999998743566589731 No 234 >d1jb9a2 c.25.1.1 (A:163-316) Ferredoxin reductase (flavodoxin reductase) {Maize (Zea mays), root isoform [TaxId: 4577]} Probab=28.18 E-value=10 Score=15.33 Aligned_cols=26 Identities=19% Similarity=0.298 Sum_probs=20.2 Q ss_pred CCCEEEECCEEECCCCCCHHHHHHHHHHHH Q ss_conf 898899823000788874899999999852 Q gi|254780401|r 43 PIPVICVGGFVMGGTGKTPTALAIAKAVID 72 (338) Q Consensus 43 ~~pVI~VGNitvGGtGKTP~v~~l~~~l~~ 72 (338) ..|+|.| .||||=||+.-.|-..+.. T Consensus 3 ~~plllI----a~GtGIaP~~s~l~~~~~~ 28 (154) T d1jb9a2 3 NATHIMI----ATGTGVAPFRGYLRRMFME 28 (154) T ss_dssp TCEEEEE----EEGGGGHHHHHHHHHHHTE T ss_pred CCCEEEE----ECCEEHHHHHHHHHHHHHH T ss_conf 9989999----8233499999999999985 No 235 >d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]} Probab=28.15 E-value=15 Score=14.22 Aligned_cols=28 Identities=14% Similarity=0.132 Sum_probs=22.6 Q ss_pred EECCCCCCHHHHHHHHHHHHCCCCEEEEEE Q ss_conf 007888748999999998524731598760 Q gi|254780401|r 53 VMGGTGKTPTALAIAKAVIDKNLKPGFLSR 82 (338) Q Consensus 53 tvGGtGKTP~v~~l~~~l~~~g~~~~ilsR 82 (338) .+|||| =+=..+|+.|.+.|.+|.+++| T Consensus 30 ITGas~--GIG~aiA~~la~~Ga~Vii~~r 57 (294) T d1w6ua_ 30 ITGGGT--GLGKGMTTLLSSLGAQCVIASR 57 (294) T ss_dssp EETTTS--HHHHHHHHHHHHTTCEEEEEES T ss_pred EECCCC--HHHHHHHHHHHHCCCEEEEEEC T ss_conf 928888--8999999999986998999979 No 236 >d1a8pa2 c.25.1.1 (A:101-258) Ferredoxin reductase (flavodoxin reductase) {Azotobacter vinelandii [TaxId: 354]} Probab=28.14 E-value=7.5 Score=16.35 Aligned_cols=32 Identities=19% Similarity=0.230 Sum_probs=20.6 Q ss_pred CEEEECCEEECCCCCCHHHHHHHHHHHHCCCCEEEE Q ss_conf 889982300078887489999999985247315987 Q gi|254780401|r 45 PVICVGGFVMGGTGKTPTALAIAKAVIDKNLKPGFL 80 (338) Q Consensus 45 pVI~VGNitvGGtGKTP~v~~l~~~l~~~g~~~~il 80 (338) ++|+| +||||=||+.-.+-..+.....+...+ T Consensus 9 ~lvlI----agGtGIaP~~sil~~~~~~~~~~~~~l 40 (158) T d1a8pa2 9 HLYML----STGTGLAPFMSLIQDPEVYERFEKVVL 40 (158) T ss_dssp EEEEE----EEGGGGHHHHHHTTCHHHHHHCSEEEE T ss_pred CEEEE----ECHHHHHHHHHHHHHHHHHCCCCCEEE T ss_conf 79999----855529999999999998099883466 No 237 >d1ak2a1 c.37.1.1 (A:14-146,A:177-233) Adenylate kinase {Cow (Bos taurus), mitochondrial izozyme-2 [TaxId: 9913]} Probab=27.81 E-value=12 Score=14.93 Aligned_cols=24 Identities=29% Similarity=0.448 Sum_probs=18.0 Q ss_pred CCEEEECCEEECCCCCCHHHHHHHHHH Q ss_conf 988998230007888748999999998 Q gi|254780401|r 44 IPVICVGGFVMGGTGKTPTALAIAKAV 70 (338) Q Consensus 44 ~pVI~VGNitvGGtGKTP~v~~l~~~l 70 (338) +.||-+| .-|+|||-.+..||+.+ T Consensus 4 ~riil~G---~pGSGKsT~a~~La~~~ 27 (190) T d1ak2a1 4 VRAVLLG---PPGAGKGTQAPKLAKNF 27 (190) T ss_dssp CEEEEEC---CTTSSHHHHHHHHHHHH T ss_pred CEEEEEC---CCCCCHHHHHHHHHHHH T ss_conf 3899989---99998899999999986 No 238 >d1jf8a_ c.44.1.1 (A:) Arsenate reductase ArsC {Staphylococcus aureus [TaxId: 1280]} Probab=27.76 E-value=15 Score=14.17 Aligned_cols=34 Identities=21% Similarity=0.240 Sum_probs=25.1 Q ss_pred CCEEEECCEEECCCCCCHHHHHHHHHHHHCCCCEEEEEECC Q ss_conf 98899823000788874899999999852473159876045 Q gi|254780401|r 44 IPVICVGGFVMGGTGKTPTALAIAKAVIDKNLKPGFLSRGY 84 (338) Q Consensus 44 ~pVI~VGNitvGGtGKTP~v~~l~~~l~~~g~~~~ilsRGY 84 (338) |-.||.||. +-+||+.++++.+... ++-+-|-|- T Consensus 5 vlFvC~~N~-----cRS~mAEa~~~~~~~~--~~~v~SAG~ 38 (130) T d1jf8a_ 5 IYFISTGNS-----ARSQMAEGWGKEILGE--GWNVYSAGI 38 (130) T ss_dssp EEEEESSSS-----SHHHHHHHHHHHHSTT--TEEEEEEES T ss_pred EEEEECCCC-----HHHHHHHHHHHHCCCC--CCEECCCCC T ss_conf 999929981-----7989999999960776--605504342 No 239 >d1qf9a_ c.37.1.1 (A:) UMP/CMP kinase {Dictyostelium discoideum [TaxId: 44689]} Probab=27.76 E-value=12 Score=14.92 Aligned_cols=17 Identities=24% Similarity=0.343 Sum_probs=13.9 Q ss_pred ECCCCCCHHHHHHHHHH Q ss_conf 07888748999999998 Q gi|254780401|r 54 MGGTGKTPTALAIAKAV 70 (338) Q Consensus 54 vGGtGKTP~v~~l~~~l 70 (338) .-|+|||-.+..|++.+ T Consensus 14 ~pGSGKsT~a~~La~~~ 30 (194) T d1qf9a_ 14 GPGSGKGTQCANIVRDF 30 (194) T ss_dssp STTSSHHHHHHHHHHHH T ss_pred CCCCCHHHHHHHHHHHH T ss_conf 99998899999999997 No 240 >d1xjha_ g.81.1.1 (A:) HSP33, C-terminal domain {Escherichia coli [TaxId: 562]} Probab=27.73 E-value=11 Score=15.08 Aligned_cols=42 Identities=19% Similarity=0.279 Sum_probs=27.1 Q ss_pred CCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHH Q ss_conf 1553578999887401000012214332348989999999975 Q gi|254780401|r 230 GIADTEKFFTTVRQLGALIEQCYSFGDHAHLSDKKIAYLLDQA 272 (338) Q Consensus 230 GIa~P~~F~~~L~~~g~~i~~~~~fpDHh~ys~~dl~~i~~~a 272 (338) +++ ++-..+++.+.|---+....-..+|.|+..|++.|++.| T Consensus 20 ~l~-~~El~~~~~e~g~iev~C~fC~~~Y~f~~~dl~~l~~~a 61 (62) T d1xjha_ 20 TLP-DEEVDSILAEDGEIDMHCDYCGNHYLFNAMDIAEIRNNA 61 (62) T ss_dssp TSC-HHHHHHHHHHHSEEEEECTTTCCEEEEEHHHHHHHTTTC T ss_pred HCC-HHHHHHHHHCCCCEEEEEECCCCEEEECHHHHHHHHHHC T ss_conf 369-999999996289789982387998888999999999845 No 241 >d1a2oa1 c.23.1.1 (A:1-140) Methylesterase CheB, N-terminal domain {Salmonella typhimurium [TaxId: 90371]} Probab=27.71 E-value=10 Score=15.41 Aligned_cols=25 Identities=12% Similarity=0.290 Sum_probs=17.1 Q ss_pred CCCCCCHHHHHHHHCCCCCCEEEEC Q ss_conf 3465201225664102457479971 Q gi|254780401|r 117 TIVTSDRKIGVQMLLQEGVDIIIMD 141 (338) Q Consensus 117 v~V~~~R~~~~~~~~~~~~diiIlD 141 (338) |..+.|-.+|...+.+..+|+||+| T Consensus 32 v~~a~~g~~al~~~~~~~pDlvllD 56 (140) T d1a2oa1 32 VATAPDPLVARDLIKKFNPDVLTLD 56 (140) T ss_dssp EEEESSHHHHHHHHHHHCCSEEEEE T ss_pred EEEECCHHHHHHHHHHCCCCEEEEC T ss_conf 9997999999999984598999975 No 242 >d1ltqa1 c.108.1.9 (A:153-301) Polynucleotide kinase, phosphatase domain {Bacteriophage T4 [TaxId: 10665]} Probab=27.69 E-value=15 Score=14.16 Aligned_cols=22 Identities=14% Similarity=0.132 Sum_probs=14.7 Q ss_pred CHHHHHHHHHHHHCCCCEEEEE Q ss_conf 4899999999852473159876 Q gi|254780401|r 60 TPTALAIAKAVIDKNLKPGFLS 81 (338) Q Consensus 60 TP~v~~l~~~l~~~g~~~~ils 81 (338) -|-++.+++.|+++|++++++| T Consensus 38 ~p~v~~~l~~l~~~G~~Iii~T 59 (149) T d1ltqa1 38 NPMVVELSKMYALMGYQIVVVS 59 (149) T ss_dssp CHHHHHHHHHHHHTTCEEEEEE T ss_pred CHHHHHHHHHHHHCCCEEEEEE T ss_conf 8789999999984448089992 No 243 >d1x92a_ c.80.1.3 (A:) Phosphoheptose isomerase GmhA1 {Pseudomonas aeruginosa [TaxId: 287]} Probab=27.62 E-value=15 Score=14.15 Aligned_cols=19 Identities=5% Similarity=0.090 Sum_probs=11.8 Q ss_pred CHHHHHHHHCCCCCCEEEE Q ss_conf 0122566410245747997 Q gi|254780401|r 122 DRKIGVQMLLQEGVDIIIM 140 (338) Q Consensus 122 ~R~~~~~~~~~~~~diiIl 140 (338) +=..+++++.+.+..+|.+ T Consensus 125 nvi~a~~~Ak~~g~~~i~l 143 (194) T d1x92a_ 125 NVIQAIQAAHDREMLVVAL 143 (194) T ss_dssp HHHHHHHHHHHTTCEEEEE T ss_pred HHHHHHHHHHHCCCEEEEE T ss_conf 3579999987538469999 No 244 >d1dbwa_ c.23.1.1 (A:) Transcriptional regulatory protein FixJ, receiver domain {Rhizobium meliloti [TaxId: 382]} Probab=27.55 E-value=15 Score=14.14 Aligned_cols=46 Identities=15% Similarity=0.270 Sum_probs=25.7 Q ss_pred CCEEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH Q ss_conf 86389874155357899988740100001221433234898999999997564 Q gi|254780401|r 222 GKKVLAFSGIADTEKFFTTVRQLGALIEQCYSFGDHAHLSDKKIAYLLDQAQQ 274 (338) Q Consensus 222 ~k~v~afsGIa~P~~F~~~L~~~g~~i~~~~~fpDHh~ys~~dl~~i~~~a~~ 274 (338) ..+++++||-++++...+.++. |+. ..+. -+|+..++....++|.+ T Consensus 75 ~~~iI~lt~~~~~~~~~~a~~~-Ga~--~yl~----KP~~~~~L~~~i~~a~e 120 (123) T d1dbwa_ 75 NIPSIVITGHGDVPMAVEAMKA-GAV--DFIE----KPFEDTVIIEAIERASE 120 (123) T ss_dssp CCCEEEEECTTCHHHHHHHHHT-TCS--EEEE----SSCCHHHHHHHHHHHHT T ss_pred CCEEEEEEEECCHHHHHHHHHC-CCC--EEEE----CCCCHHHHHHHHHHHHH T ss_conf 8759999836899999999987-998--8998----97999999999999998 No 245 >d1x74a1 c.123.1.1 (A:2-360) 2-methylacyl-CoA racemase Mcr {Mycobacterium tuberculosis [TaxId: 1773]} Probab=27.48 E-value=15 Score=14.14 Aligned_cols=32 Identities=19% Similarity=0.116 Sum_probs=22.3 Q ss_pred CCCEEEECCEEECCCCCCHHHHHHHHHHHHCCCCEEEEEE Q ss_conf 8988998230007888748999999998524731598760 Q gi|254780401|r 43 PIPVICVGGFVMGGTGKTPTALAIAKAVIDKNLKPGFLSR 82 (338) Q Consensus 43 ~~pVI~VGNitvGGtGKTP~v~~l~~~l~~~g~~~~ilsR 82 (338) .+.||..++...|. +..+.|-+.|-.|.=|-+ T Consensus 6 girVld~~~~~agp--------~~~~~lad~GA~VikvE~ 37 (359) T d1x74a1 6 GLRVVELAGIGPGP--------HAAMILGDLGADVVRIDR 37 (359) T ss_dssp TCEEEEECCSTHHH--------HHHHHHHHTTCEEEEEEC T ss_pred CCEEEECCCCHHHH--------HHHHHHHHHCCEEEEECC T ss_conf 98999827830899--------999999983997999899 No 246 >d1e4va1 c.37.1.1 (A:1-121,A:157-214) Adenylate kinase {Escherichia coli [TaxId: 562]} Probab=27.38 E-value=12 Score=14.85 Aligned_cols=16 Identities=25% Similarity=0.127 Sum_probs=13.6 Q ss_pred CCCCCCHHHHHHHHHH Q ss_conf 7888748999999998 Q gi|254780401|r 55 GGTGKTPTALAIAKAV 70 (338) Q Consensus 55 GGtGKTP~v~~l~~~l 70 (338) =|+|||-.+..|++.+ T Consensus 9 pGSGKsT~~~~La~~~ 24 (179) T d1e4va1 9 PVAGKGTQAQFIMEKY 24 (179) T ss_dssp TTSSHHHHHHHHHHHH T ss_pred CCCCHHHHHHHHHHHH T ss_conf 9999899999999986 No 247 >d1g8pa_ c.37.1.20 (A:) ATPase subunit of magnesium chelatase, BchI {Rhodobacter capsulatus [TaxId: 1061]} Probab=27.09 E-value=12 Score=15.00 Aligned_cols=23 Identities=35% Similarity=0.525 Sum_probs=16.7 Q ss_pred EEEECCEEECCCCCCHHHHHHHHHHH Q ss_conf 89982300078887489999999985 Q gi|254780401|r 46 VICVGGFVMGGTGKTPTALAIAKAVI 71 (338) Q Consensus 46 VI~VGNitvGGtGKTP~v~~l~~~l~ 71 (338) |+-+|- =|||||-++..+++.|- T Consensus 31 vLl~G~---pG~GKT~lar~~~~iLp 53 (333) T d1g8pa_ 31 VLVFGD---RGTGKSTAVRALAALLP 53 (333) T ss_dssp EEEECC---GGGCTTHHHHHHHHHSC T ss_pred EEEECC---CCCCHHHHHHHHHHHCC T ss_conf 899889---98529999999987379 No 248 >d1teva_ c.37.1.1 (A:) UMP/CMP kinase {Human (Homo sapiens) [TaxId: 9606]} Probab=26.86 E-value=13 Score=14.74 Aligned_cols=16 Identities=25% Similarity=0.353 Sum_probs=14.3 Q ss_pred CCCCCCHHHHHHHHHH Q ss_conf 7888748999999998 Q gi|254780401|r 55 GGTGKTPTALAIAKAV 70 (338) Q Consensus 55 GGtGKTP~v~~l~~~l 70 (338) -|+|||-.+..|++.+ T Consensus 10 pGSGKsT~a~~La~~~ 25 (194) T d1teva_ 10 PGAGKGTQCARIVEKY 25 (194) T ss_dssp TTSSHHHHHHHHHHHH T ss_pred CCCCHHHHHHHHHHHH T ss_conf 9999899999999986 No 249 >d2fnaa2 c.37.1.20 (A:1-283) Archaeal ATPase SSO1545 {Sulfolobus solfataricus [TaxId: 2287]} Probab=26.68 E-value=13 Score=14.54 Aligned_cols=18 Identities=17% Similarity=0.099 Sum_probs=14.2 Q ss_pred ECCCCCCHHHHHHHHHHH Q ss_conf 078887489999999985 Q gi|254780401|r 54 MGGTGKTPTALAIAKAVI 71 (338) Q Consensus 54 vGGtGKTP~v~~l~~~l~ 71 (338) -.|+|||-++..+++.+. T Consensus 37 ~~G~GKTsLl~~~~~~~~ 54 (283) T d2fnaa2 37 LRRTGKSSIIKIGINELN 54 (283) T ss_dssp STTSSHHHHHHHHHHHHT T ss_pred CCCCCHHHHHHHHHHHCC T ss_conf 999829999999999779 No 250 >d1u8za_ c.37.1.8 (A:) Ras-related protein RalA {Cotton-top tamarin (Saguinus oedipus) [TaxId: 9490]} Probab=26.60 E-value=16 Score=14.03 Aligned_cols=20 Identities=45% Similarity=0.742 Sum_probs=14.4 Q ss_pred CEEEECCEEECCCCCCHHHHHHH Q ss_conf 88998230007888748999999 Q gi|254780401|r 45 PVICVGGFVMGGTGKTPTALAIA 67 (338) Q Consensus 45 pVI~VGNitvGGtGKTP~v~~l~ 67 (338) .|+.||+ .|+|||-++..++ T Consensus 6 KivlvG~---~~vGKTsli~~~~ 25 (168) T d1u8za_ 6 KVIMVGS---GGVGKSALTLQFM 25 (168) T ss_dssp EEEEECS---TTSSHHHHHHHHH T ss_pred EEEEECC---CCCCHHHHHHHHH T ss_conf 9999998---9958899999997 No 251 >d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Probab=26.36 E-value=16 Score=14.00 Aligned_cols=29 Identities=17% Similarity=0.300 Sum_probs=22.3 Q ss_pred EEECCCCCCHHHHHHHHHHHHCCCCEEEEEE Q ss_conf 0007888748999999998524731598760 Q gi|254780401|r 52 FVMGGTGKTPTALAIAKAVIDKNLKPGFLSR 82 (338) Q Consensus 52 itvGGtGKTP~v~~l~~~l~~~g~~~~ilsR 82 (338) |.+|||| -+=-+|++.|.+.|+.+.+..+ T Consensus 4 LItG~tG--fIGs~l~~~L~~~g~~vv~~~d 32 (361) T d1kewa_ 4 LITGGAG--FIGSAVVRHIIKNTQDTVVNID 32 (361) T ss_dssp EEESTTS--HHHHHHHHHHHHHCSCEEEEEE T ss_pred EEECCCC--HHHHHHHHHHHHCCCCEEEEEE T ss_conf 9988876--7999999999977997899984 No 252 >d1znwa1 c.37.1.1 (A:20-201) Guanylate kinase {Mycobacterium tuberculosis [TaxId: 1773]} Probab=26.05 E-value=9.9 Score=15.49 Aligned_cols=28 Identities=11% Similarity=0.223 Sum_probs=17.3 Q ss_pred CCCCCCHHHHHHHHHHHHCCCCEEEEEE Q ss_conf 7888748999999998524731598760 Q gi|254780401|r 55 GGTGKTPTALAIAKAVIDKNLKPGFLSR 82 (338) Q Consensus 55 GGtGKTP~v~~l~~~l~~~g~~~~ilsR 82 (338) -|+|||.+...|++.+....+.+...+| T Consensus 11 sG~GK~tl~~~L~~~~~~~~~~~~~tTR 38 (182) T d1znwa1 11 SAVGKSTVVRCLRERIPNLHFSVSATTR 38 (182) T ss_dssp TTSSHHHHHHHHHHHSTTCEECCCEESS T ss_pred CCCCHHHHHHHHHHHCCCCEEEEEEECC T ss_conf 9999999999998458997179886046 No 253 >d1a04a2 c.23.1.1 (A:5-142) Nitrate/nitrite response regulator (NarL), receiver domain {Escherichia coli [TaxId: 562]} Probab=26.03 E-value=9.7 Score=15.54 Aligned_cols=22 Identities=23% Similarity=0.471 Sum_probs=11.9 Q ss_pred CCCHHHHHHHHCCCCCCEEEEC Q ss_conf 5201225664102457479971 Q gi|254780401|r 120 TSDRKIGVQMLLQEGVDIIIMD 141 (338) Q Consensus 120 ~~~R~~~~~~~~~~~~diiIlD 141 (338) +.+-.++.+.+.+..+|++|+| T Consensus 34 a~~~~~al~~~~~~~~DlvllD 55 (138) T d1a04a2 34 ASNGEQGIELAESLDPDLILLD 55 (138) T ss_dssp ESSHHHHHHHHHHHCCSEEEEE T ss_pred ECCHHHHHHHHHHCCCCEEEEE T ss_conf 7999999999985699799986 No 254 >d1kgsa2 c.23.1.1 (A:2-123) PhoB receiver domain {Thermotoga maritima [TaxId: 2336]} Probab=25.81 E-value=15 Score=14.12 Aligned_cols=25 Identities=36% Similarity=0.510 Sum_probs=11.8 Q ss_pred CCCCCCHHHHHHHHCCCCCCEEEEC Q ss_conf 3465201225664102457479971 Q gi|254780401|r 117 TIVTSDRKIGVQMLLQEGVDIIIMD 141 (338) Q Consensus 117 v~V~~~R~~~~~~~~~~~~diiIlD 141 (338) |.++.+-.+|...+.+..+|+||+| T Consensus 28 v~~a~~~~~al~~l~~~~~dlillD 52 (122) T d1kgsa2 28 VDVCYDGEEGMYMALNEPFDVVILD 52 (122) T ss_dssp EEEESSHHHHHHHHHHSCCSEEEEE T ss_pred EEEECCHHHHHHHHHHHCCCCCCCC T ss_conf 9997566999999986276522001 No 255 >d2f5va1 c.3.1.2 (A:43-354,A:553-619) Pyranose 2-oxidase {White-rot fungus (Peniophora sp. SG) [TaxId: 204723]} Probab=25.73 E-value=13 Score=14.66 Aligned_cols=32 Identities=19% Similarity=0.244 Sum_probs=23.0 Q ss_pred EEEECCEEECCCCCCHHHHHHHHHHHHCCCCEEEEEECCC Q ss_conf 8998230007888748999999998524731598760457 Q gi|254780401|r 46 VICVGGFVMGGTGKTPTALAIAKAVIDKNLKPGFLSRGYG 85 (338) Q Consensus 46 VI~VGNitvGGtGKTP~v~~l~~~l~~~g~~~~ilsRGYg 85 (338) ||.||.=+. =.-+|..|.+.|++|.+|=+|.. T Consensus 7 viIVGsG~a--------G~v~A~~La~~G~kVlvLEaG~~ 38 (379) T d2f5va1 7 VVIVGSGPI--------GCTYARELVGAGYKVAMFDIGEI 38 (379) T ss_dssp EEEECCSHH--------HHHHHHHHHHTTCEEEEECSSCC T ss_pred EEEECCCHH--------HHHHHHHHHHCCCEEEEEECCCC T ss_conf 899896889--------99999999658893999936899 No 256 >d1q3ta_ c.37.1.1 (A:) CMP kinase {Streptococcus pneumoniae [TaxId: 1313]} Probab=25.66 E-value=14 Score=14.49 Aligned_cols=24 Identities=33% Similarity=0.455 Sum_probs=17.0 Q ss_pred CCCCCCHHHHHHHHHHHHCCCCEEEEEEC Q ss_conf 78887489999999985247315987604 Q gi|254780401|r 55 GGTGKTPTALAIAKAVIDKNLKPGFLSRG 83 (338) Q Consensus 55 GGtGKTP~v~~l~~~l~~~g~~~~ilsRG 83 (338) -|+|||-.+..||+.| ...-+|=| T Consensus 12 ~GsGKgT~ak~La~~l-----g~~~istG 35 (223) T d1q3ta_ 12 ASSGKSTVAKIIAKDF-----GFTYLDTG 35 (223) T ss_dssp SCSSHHHHHHHHHHHH-----CCEEEEHH T ss_pred CCCCHHHHHHHHHHHH-----CCCEECHH T ss_conf 9879899999999996-----99478779 No 257 >d1p8aa_ c.44.1.1 (A:) Tyrosine phosphatase {Tritrichomonas foetus [TaxId: 5724]} Probab=25.65 E-value=5.1 Score=17.51 Aligned_cols=36 Identities=17% Similarity=0.391 Sum_probs=26.1 Q ss_pred CCCCCEEEECCEEECCCCCCHHHHHHHHHHHHCCCCEEEEEEC Q ss_conf 3889889982300078887489999999985247315987604 Q gi|254780401|r 41 HAPIPVICVGGFVMGGTGKTPTALAIAKAVIDKNLKPGFLSRG 83 (338) Q Consensus 41 ~~~~pVI~VGNitvGGtGKTP~v~~l~~~l~~~g~~~~ilsRG 83 (338) +-.|-.||.||+ .-.||+.++.+.+... +.-+.|.| T Consensus 4 k~~VLFVC~gN~-----cRSpmAEai~~~~~~~--~~~v~SAg 39 (146) T d1p8aa_ 4 KKAVLFVCLGNI-----CRSPACEGICRDMVGD--KLIIDSAA 39 (146) T ss_dssp CCCEEEESSSSC-----SSSTTHHHHHHHHHSS--CSSCEEEC T ss_pred CCEEEEEECCCH-----HHHHHHHHHHHHHCCC--CCEEEEEE T ss_conf 998999979768-----9999999999986668--71377677 No 258 >d2g9na1 c.37.1.19 (A:21-238) Initiation factor 4a {Human (Homo sapiens) [TaxId: 9606]} Probab=25.59 E-value=17 Score=13.90 Aligned_cols=50 Identities=20% Similarity=0.191 Sum_probs=21.2 Q ss_pred ECCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCEEEECCCCCHHHHCCHHHHHHHC Q ss_conf 0788874899999999852473159876045787777558714567887704212332205 Q gi|254780401|r 54 MGGTGKTPTALAIAKAVIDKNLKPGFLSRGYGRKSRISFRVDLEKHSAYDVGDEPLLLARR 114 (338) Q Consensus 54 vGGtGKTP~v~~l~~~l~~~g~~~~ilsRGYg~~~~~~~~v~~~~~~~~~vGDEp~lla~~ 114 (338) -=|||||-. |+.-.++.... .......+.+.+...-+.++-++-..+... T Consensus 57 ~TGsGKTla--yllp~l~~i~~---------~~~~~~alil~Pt~eL~~Q~~~~~~~~~~~ 106 (218) T d2g9na1 57 QSGTGKTAT--FAISILQQIEL---------DLKATQALVLAPTRELAQQIQKVVMALGDY 106 (218) T ss_dssp CTTSSHHHH--HHHHHHHHCCT---------TCCSCCEEEECSSHHHHHHHHHHHHHHHTT T ss_pred CCCHHHHHH--HHHHHHHEECC---------CCCCCCEEEECCCCHHHHHHHHHHHHHCCC T ss_conf 562544554--33102220003---------666751899824511235677777651244 No 259 >d1u7za_ c.72.3.1 (A:) Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) {Escherichia coli [TaxId: 562]} Probab=25.18 E-value=17 Score=13.85 Aligned_cols=32 Identities=28% Similarity=0.400 Sum_probs=26.4 Q ss_pred CEEEECCEEECCCCCCHHHHHHHHHHHHCCCCEEEEE Q ss_conf 8899823000788874899999999852473159876 Q gi|254780401|r 45 PVICVGGFVMGGTGKTPTALAIAKAVIDKNLKPGFLS 81 (338) Q Consensus 45 pVI~VGNitvGGtGKTP~v~~l~~~l~~~g~~~~ils 81 (338) ||=.|+|-+.|-+| .+||+.+..+|..|.+++ T Consensus 22 ~VR~ItN~SSGk~G-----~aiA~~~~~~Ga~V~li~ 53 (223) T d1u7za_ 22 PVRYISDHSSGKMG-----FAIAAAAARRGANVTLVS 53 (223) T ss_dssp SSEEEEECCCSHHH-----HHHHHHHHHTTCEEEEEE T ss_pred CCCEECCCCCHHHH-----HHHHHHHHHCCCCHHHHH T ss_conf 82352627937999-----999999998698243241 No 260 >d1akya1 c.37.1.1 (A:3-130,A:169-220) Adenylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Probab=25.00 E-value=14 Score=14.35 Aligned_cols=23 Identities=22% Similarity=0.406 Sum_probs=16.8 Q ss_pred CEEEECCEEECCCCCCHHHHHHHHHH Q ss_conf 88998230007888748999999998 Q gi|254780401|r 45 PVICVGGFVMGGTGKTPTALAIAKAV 70 (338) Q Consensus 45 pVI~VGNitvGGtGKTP~v~~l~~~l 70 (338) .||.+|- =|+|||-.+..|++.+ T Consensus 4 rIvl~G~---pGSGKtT~a~~La~~~ 26 (180) T d1akya1 4 RMVLIGP---PGAGKGTQAPNLQERF 26 (180) T ss_dssp EEEEECC---TTSSHHHHHHHHHHHH T ss_pred EEEEECC---CCCCHHHHHHHHHHHH T ss_conf 9999899---9999899999999996 No 261 >d1u1ia2 d.81.1.3 (A:228-332) Myo-inositol 1-phosphate synthase {Archaeoglobus fulgidus [TaxId: 2234]} Probab=24.79 E-value=17 Score=13.80 Aligned_cols=24 Identities=21% Similarity=0.131 Sum_probs=20.7 Q ss_pred CCCCHHHHHHHHHHHHCCCCEEEE Q ss_conf 887489999999985247315987 Q gi|254780401|r 57 TGKTPTALAIAKAVIDKNLKPGFL 80 (338) Q Consensus 57 tGKTP~v~~l~~~l~~~g~~~~il 80 (338) ||-|.+--.||..|..+|.+|--. T Consensus 1 tG~T~~k~~La~~~~~Rgl~v~~~ 24 (105) T d1u1ia2 1 TGETLVKTTLAPMFAYRNMEVVGW 24 (105) T ss_dssp CSHHHHHHHHHHHHHTTTCEEEEE T ss_pred CCCCHHHHHHHHHHHHCCCCEEEE T ss_conf 984209999999999859960489 No 262 >d2c0ha1 c.1.8.3 (A:18-367) endo-1,4-beta-mannosidase {Blue mussel (Mytilus edulis) [TaxId: 6550]} Probab=24.48 E-value=17 Score=13.76 Aligned_cols=18 Identities=0% Similarity=-0.232 Sum_probs=10.9 Q ss_pred HHHHHHHHHHCCCCEEEE Q ss_conf 999999985247315987 Q gi|254780401|r 63 ALAIAKAVIDKNLKPGFL 80 (338) Q Consensus 63 v~~l~~~l~~~g~~~~il 80 (338) +....+.++++|.+..=+ T Consensus 44 ~~~~l~~~~~~G~N~vRv 61 (350) T d2c0ha1 44 FESTLSDMQSHGGNSVRV 61 (350) T ss_dssp HHHHHHHHHHTTCCEEEE T ss_pred HHHHHHHHHHCCCCEEEE T ss_conf 999999999769988998 No 263 >d1vkoa2 d.81.1.3 (A:315-428) Myo-inositol 1-phosphate synthase {Caenorhabditis elegans [TaxId: 6239]} Probab=24.45 E-value=17 Score=13.76 Aligned_cols=24 Identities=21% Similarity=0.379 Sum_probs=21.0 Q ss_pred CCCCHHHHHHHHHHHHCCCCEEEE Q ss_conf 887489999999985247315987 Q gi|254780401|r 57 TGKTPTALAIAKAVIDKNLKPGFL 80 (338) Q Consensus 57 tGKTP~v~~l~~~l~~~g~~~~il 80 (338) ||-|.+--.||..|..+|.+|--. T Consensus 1 tGqT~~k~~La~~~~~Rglkv~~~ 24 (114) T d1vkoa2 1 SGQTKFKSAFVDFLVSSGMKPESI 24 (114) T ss_dssp CSHHHHHHHHHHHHHHTTCEEEEE T ss_pred CCCCHHHHHHHHHHHHCCCCCEEE T ss_conf 985128999999999769960379 No 264 >g1w2w.1 c.124.1.5 (A:,B:) Putative methylthioribose-1-phosphate isomerase Ypr118W {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Probab=24.22 E-value=13 Score=14.57 Aligned_cols=64 Identities=16% Similarity=0.192 Sum_probs=43.3 Q ss_pred CCCCCCCCCH--HHHH----HHHCCCCCCEEEECCCCCCCCCCC---EEEEEEECCCCCCCCCCCC-CCHHHHH Q ss_conf 5763465201--2256----641024574799718322344123---0699996184335665537-6136521 Q gi|254780401|r 114 RAVTIVTSDR--KIGV----QMLLQEGVDIIIMDDGFHSADLQA---DFSLIVVNSHRGLGNGLVF-PAGPLRV 177 (338) Q Consensus 114 ~~pv~V~~~R--~~~~----~~~~~~~~diiIlDDGfQh~~l~r---dl~Ivl~d~~~~~gn~~ll-PaGpLRE 177 (338) ++-|+|...| .+|+ +.+.+.+.++.+.-|..=-+-+.+ |++-|++-+.+-.-||.++ ..|..-- T Consensus 215 ~f~V~v~EsRP~~qG~rl~a~~L~~~gI~~t~i~dsa~~~~m~~~~~~vd~V~vGAd~i~~nG~v~nkiGT~~~ 288 (402) T g1w2w.1 215 MGHVFPLETRPYNQGSRLTAYELVYDKIPSTLITDSSIAYRIRTSPIPIKAAFVGADRIVRNGDTANKIGTLQL 288 (402) T ss_dssp EEEEEEBCCTTTTHHHHTHHHHHHHHTCCBEEBCGGGHHHHHHHCSSCEEEEEECCSEECTTSCEEEETTHHHH T ss_pred EEEEEEECCCCCCCCHHHHHHHHHHCCCCEEEEECHHHHHHHHHCCCCCCEEEECCCEECCCCCEEEHHHHHHH T ss_conf 47999957887442178888999865877089740568999863475643699713233068877666878889 No 265 >d1w25a1 c.23.1.1 (A:2-140) Response regulator PleD, receiver domain {Caulobacter crescentus [TaxId: 155892]} Probab=24.09 E-value=15 Score=14.13 Aligned_cols=26 Identities=23% Similarity=0.296 Sum_probs=12.3 Q ss_pred CCCCCCCHHHHHHHHCCCCCCEEEEC Q ss_conf 63465201225664102457479971 Q gi|254780401|r 116 VTIVTSDRKIGVQMLLQEGVDIIIMD 141 (338) Q Consensus 116 pv~V~~~R~~~~~~~~~~~~diiIlD 141 (338) -|.++.+-.+|...+.+..+|+|++| T Consensus 27 ~v~~a~~~~eal~~~~~~~~dlil~D 52 (139) T d1w25a1 27 EVSTAMDGPTALAMAARDLPDIILLD 52 (139) T ss_dssp EEEEESSHHHHHHHHHHHCCSEEEEE T ss_pred EEEEECCCHHHHHHHHCCCCEEEEEE T ss_conf 99997463254554313541022110 No 266 >d2ak3a1 c.37.1.1 (A:0-124,A:162-225) Adenylate kinase {Cow (Bos taurus), mitochondrial izozyme-3 [TaxId: 9913]} Probab=24.04 E-value=12 Score=14.86 Aligned_cols=22 Identities=27% Similarity=0.421 Sum_probs=16.0 Q ss_pred EEEECCEEECCCCCCHHHHHHHHHH Q ss_conf 8998230007888748999999998 Q gi|254780401|r 46 VICVGGFVMGGTGKTPTALAIAKAV 70 (338) Q Consensus 46 VI~VGNitvGGtGKTP~v~~l~~~l 70 (338) ||.+|- =|+|||-.+..|++.+ T Consensus 9 IiliG~---PGSGKtT~a~~La~~~ 30 (189) T d2ak3a1 9 AAIMGA---PGSGKGTVSSRITKHF 30 (189) T ss_dssp EEEECC---TTSSHHHHHHHHHHHB T ss_pred EEEECC---CCCCHHHHHHHHHHHH T ss_conf 999889---9998799999999997 No 267 >d1dg9a_ c.44.1.1 (A:) Tyrosine phosphatase {Cow (Bos taurus) [TaxId: 9913]} Probab=24.04 E-value=18 Score=13.71 Aligned_cols=37 Identities=19% Similarity=0.328 Sum_probs=27.4 Q ss_pred CCCEEEECCEEECCCCCCHHHHHHHHHHHH-CC--CCEEEEEECC Q ss_conf 898899823000788874899999999852-47--3159876045 Q gi|254780401|r 43 PIPVICVGGFVMGGTGKTPTALAIAKAVID-KN--LKPGFLSRGY 84 (338) Q Consensus 43 ~~pVI~VGNitvGGtGKTP~v~~l~~~l~~-~g--~~~~ilsRGY 84 (338) .|-.+|.||+ .-.||+.++.+.+.. +| -...+-|.|= T Consensus 7 ~ILFVCtgN~-----cRSpmAEal~~~~~~~~~l~~~~~v~SaG~ 46 (157) T d1dg9a_ 7 SVLFVCLGNI-----CRSPIAEAVFRKLVTDQNISDNWVIDSGAV 46 (157) T ss_dssp EEEEEESSSS-----SHHHHHHHHHHHHHHHTTCGGGEEEEEEES T ss_pred EEEEEECCCH-----HHHHHHHHHHHHHHHHCCCCCCCEEEECCC T ss_conf 6999959828-----799999999999998668886634740133 No 268 >d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]} Probab=24.00 E-value=18 Score=13.70 Aligned_cols=31 Identities=23% Similarity=0.296 Sum_probs=23.8 Q ss_pred EEECCCCCCHHHHHHHHHHHHCCCCEEEEEE Q ss_conf 0007888748999999998524731598760 Q gi|254780401|r 52 FVMGGTGKTPTALAIAKAVIDKNLKPGFLSR 82 (338) Q Consensus 52 itvGGtGKTP~v~~l~~~l~~~g~~~~ilsR 82 (338) |.+|++|-.=+=..+|+.|.+.|.+|++..| T Consensus 12 lITGas~~~GIG~aiA~~la~~Ga~V~i~~~ 42 (256) T d1ulua_ 12 LVMGVTNQRSLGFAIAAKLKEAGAEVALSYQ 42 (256) T ss_dssp EEESCCCSSSHHHHHHHHHHHTTCEEEEEES T ss_pred EEECCCCCCHHHHHHHHHHHHCCCEEEEEEC T ss_conf 9979999866999999999987999999817 No 269 >d1kv5a_ c.1.1.1 (A:) Triosephosphate isomerase {Trypanosoma brucei [TaxId: 5691]} Probab=23.92 E-value=9.3 Score=15.70 Aligned_cols=11 Identities=18% Similarity=0.456 Sum_probs=5.0 Q ss_pred EEECCEEECCC Q ss_conf 99823000788 Q gi|254780401|r 47 ICVGGFVMGGT 57 (338) Q Consensus 47 I~VGNitvGGt 57 (338) |.+||--+=|+ T Consensus 6 iIaaNWKMN~s 16 (249) T d1kv5a_ 6 IAAANWKCNGS 16 (249) T ss_dssp EEEEECCBCCC T ss_pred EEEEECCCCCC T ss_conf 89986021879 No 270 >d1g16a_ c.37.1.8 (A:) Rab-related protein Sec4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Probab=23.70 E-value=16 Score=13.95 Aligned_cols=20 Identities=20% Similarity=0.426 Sum_probs=14.3 Q ss_pred CEEEECCEEECCCCCCHHHHHHH Q ss_conf 88998230007888748999999 Q gi|254780401|r 45 PVICVGGFVMGGTGKTPTALAIA 67 (338) Q Consensus 45 pVI~VGNitvGGtGKTP~v~~l~ 67 (338) .|+.|| -.|+|||-++..++ T Consensus 4 Ki~vvG---~~~vGKTSli~~l~ 23 (166) T d1g16a_ 4 KILLIG---DSGVGKSCLLVRFV 23 (166) T ss_dssp EEEEEE---STTSSHHHHHHHHH T ss_pred EEEEEC---CCCCCHHHHHHHHH T ss_conf 999999---99967899999998 No 271 >d2ngra_ c.37.1.8 (A:) CDC42 {Human (Homo sapiens) [TaxId: 9606]} Probab=23.46 E-value=17 Score=13.90 Aligned_cols=22 Identities=27% Similarity=0.342 Sum_probs=15.7 Q ss_pred CCEEEECCEEECCCCCCHHHHHHHH Q ss_conf 9889982300078887489999999 Q gi|254780401|r 44 IPVICVGGFVMGGTGKTPTALAIAK 68 (338) Q Consensus 44 ~pVI~VGNitvGGtGKTP~v~~l~~ 68 (338) +.|+.||+- |+|||-++..+.+ T Consensus 4 iKvvllG~~---~vGKTSli~r~~~ 25 (191) T d2ngra_ 4 IKCVVVGDG---AVGKTCLLISYTT 25 (191) T ss_dssp EEEEEEEST---TSSHHHHHHHHHH T ss_pred EEEEEECCC---CCCHHHHHHHHHH T ss_conf 699999999---9699999999971 No 272 >d1yp2a2 c.68.1.6 (A:10-316) Glucose-1-phosphate adenylyltransferase small subunit, catalytic domain {Potato (Solanum tuberosum) [TaxId: 4113]} Probab=23.45 E-value=18 Score=13.63 Aligned_cols=39 Identities=5% Similarity=0.089 Sum_probs=30.1 Q ss_pred CCCCEEEECCEEECCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCC Q ss_conf 8898899823000788874899999999852473159876045787 Q gi|254780401|r 42 APIPVICVGGFVMGGTGKTPTALAIAKAVIDKNLKPGFLSRGYGRK 87 (338) Q Consensus 42 ~~~pVI~VGNitvGGtGKTP~v~~l~~~l~~~g~~~~ilsRGYg~~ 87 (338) .|.|.+-| .|+.|+..+..+.|.+.|.+-.++--||... T Consensus 32 ~PK~llpv-------~g~~plI~~~l~~l~~~gi~~I~Iv~~~~~~ 70 (307) T d1yp2a2 32 RAKPAVPL-------GANYRLIDIPVSNCLNSNISKIYVLTQFNSA 70 (307) T ss_dssp SCGGGCEE-------TTTEETTHHHHHHHHHTTCCEEEEEESCCCH T ss_pred CCCCEEEE-------CCCCCHHHHHHHHHHHCCCCEEEEEECCCCC T ss_conf 97444797-------9998799999999998699889999035520 No 273 >d1ny5a1 c.23.1.1 (A:1-137) Transcriptional activator sigm54 (NtrC1), N-terminal domain {Aquifex aeolicus [TaxId: 63363]} Probab=23.37 E-value=16 Score=14.11 Aligned_cols=25 Identities=12% Similarity=0.298 Sum_probs=11.8 Q ss_pred CCCCCCHHHHHHHHCCCCCCEEEEC Q ss_conf 3465201225664102457479971 Q gi|254780401|r 117 TIVTSDRKIGVQMLLQEGVDIIIMD 141 (338) Q Consensus 117 v~V~~~R~~~~~~~~~~~~diiIlD 141 (338) |.++.+-.+|...+.+..+|+||+| T Consensus 27 v~~a~~~~eAl~~l~~~~~dlvilD 51 (137) T d1ny5a1 27 VESAERGKEAYKLLSEKHFNVVLLD 51 (137) T ss_dssp EEEESSHHHHHHHHHHSCCSEEEEE T ss_pred EEEECCHHHHHHHHHCCCCCCCHHH T ss_conf 9998889999987302555530177 No 274 >d1x3sa1 c.37.1.8 (A:2-178) Rab18 {Human (Homo sapiens) [TaxId: 9606]} Probab=23.18 E-value=17 Score=13.76 Aligned_cols=21 Identities=24% Similarity=0.570 Sum_probs=15.2 Q ss_pred CCEEEECCEEECCCCCCHHHHHHH Q ss_conf 988998230007888748999999 Q gi|254780401|r 44 IPVICVGGFVMGGTGKTPTALAIA 67 (338) Q Consensus 44 ~pVI~VGNitvGGtGKTP~v~~l~ 67 (338) +.|+.|| -.|+|||-++-.+. T Consensus 8 iKi~vvG---~~~vGKTsli~~l~ 28 (177) T d1x3sa1 8 LKILIIG---ESGVGKSSLLLRFT 28 (177) T ss_dssp EEEEEEC---STTSSHHHHHHHHH T ss_pred EEEEEEC---CCCCCHHHHHHHHH T ss_conf 2899999---89908899999997 No 275 >d1um8a_ c.37.1.20 (A:) ClpX {Helicobacter pylori [TaxId: 210]} Probab=22.97 E-value=14 Score=14.33 Aligned_cols=22 Identities=32% Similarity=0.484 Sum_probs=15.5 Q ss_pred ECCEEE---CCCCCCHHHHHHHHHH Q ss_conf 823000---7888748999999998 Q gi|254780401|r 49 VGGFVM---GGTGKTPTALAIAKAV 70 (338) Q Consensus 49 VGNitv---GGtGKTP~v~~l~~~l 70 (338) .+|+-. -|+|||=++..||+.+ T Consensus 68 ~~niLfiGPTGvGKTElAk~LA~~~ 92 (364) T d1um8a_ 68 KSNILLIGPTGSGKTLMAQTLAKHL 92 (364) T ss_dssp CCCEEEECCTTSSHHHHHHHHHHHT T ss_pred CCCEEEECCCCCCHHHHHHHHHHHC T ss_conf 7532441899863789999998644 No 276 >d1ktba2 c.1.8.1 (A:1-293) Melibiase {Chicken (Gallus gallus) [TaxId: 9031]} Probab=22.95 E-value=18 Score=13.57 Aligned_cols=13 Identities=31% Similarity=0.521 Sum_probs=7.7 Q ss_pred CCCEEEECCCCCC Q ss_conf 5747997183223 Q gi|254780401|r 134 GVDIIIMDDGFHS 146 (338) Q Consensus 134 ~~diiIlDDGfQh 146 (338) +.+.|++|||.|- T Consensus 54 G~~~v~iDDGW~~ 66 (293) T d1ktba2 54 GYKYINIDDCWAA 66 (293) T ss_dssp TCCEEECCSSCBC T ss_pred CCEEEEECCCCCC T ss_conf 9779998289768 No 277 >d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]} Probab=22.89 E-value=19 Score=13.56 Aligned_cols=27 Identities=33% Similarity=0.405 Sum_probs=21.1 Q ss_pred EEECCCCCCHHHHHHHHHHHHCCCC-EEEE Q ss_conf 0007888748999999998524731-5987 Q gi|254780401|r 52 FVMGGTGKTPTALAIAKAVIDKNLK-PGFL 80 (338) Q Consensus 52 itvGGtGKTP~v~~l~~~l~~~g~~-~~il 80 (338) |.+|||| -+=.+|++.|.++|+. +.++ T Consensus 3 LITGgsG--fIGs~lv~~L~~~g~~~V~~~ 30 (307) T d1eq2a_ 3 IVTGGAG--FIGSNIVKALNDKGITDILVV 30 (307) T ss_dssp EEETTTS--HHHHHHHHHHHTTTCCCEEEE T ss_pred EEECCCC--HHHHHHHHHHHHCCCCEEEEE T ss_conf 9954853--999999999996799759999 No 278 >d1g41a_ c.37.1.20 (A:) HslU {Haemophilus influenzae [TaxId: 727]} Probab=22.66 E-value=19 Score=13.53 Aligned_cols=32 Identities=34% Similarity=0.458 Sum_probs=22.3 Q ss_pred CCCEEEECCEEECCCCCCHHHHHHHHHHHHCCCCEEEEE Q ss_conf 898899823000788874899999999852473159876 Q gi|254780401|r 43 PIPVICVGGFVMGGTGKTPTALAIAKAVIDKNLKPGFLS 81 (338) Q Consensus 43 ~~pVI~VGNitvGGtGKTP~v~~l~~~l~~~g~~~~ils 81 (338) |--|+.||-= |+|||=++..||+.+ + -|-+.+ T Consensus 49 ksNILliGPT---GvGKTlLAr~LAk~l---~-VPFv~~ 80 (443) T d1g41a_ 49 PKNILMIGPT---GVGKTEIARRLAKLA---N-APFIKV 80 (443) T ss_dssp CCCEEEECCT---TSSHHHHHHHHHHHT---T-CCEEEE T ss_pred CCCEEEECCC---CCCHHHHHHHHHHHH---C-CCEEEE T ss_conf 5647998999---988999999999873---8-988986 No 279 >d1zy9a2 c.1.8.13 (A:178-525) Alpha-galactosidase GalA catalytic domain {Thermotoga maritima [TaxId: 2336]} Probab=22.32 E-value=19 Score=13.48 Aligned_cols=42 Identities=19% Similarity=0.457 Sum_probs=26.9 Q ss_pred CCCCCEEEEC--------CEEECCCCCCHHHHHHHHHHHHCCCCEEEEEEC Q ss_conf 3889889982--------300078887489999999985247315987604 Q gi|254780401|r 41 HAPIPVICVG--------GFVMGGTGKTPTALAIAKAVIDKNLKPGFLSRG 83 (338) Q Consensus 41 ~~~~pVI~VG--------NitvGGtGKTP~v~~l~~~l~~~g~~~~ilsRG 83 (338) .+++-+|.|- ..++- +.|=|=-..++++++++|.++++-.-. T Consensus 34 ~~g~~~i~iDdgW~~~~gd~~~d-~~~FPglk~l~~~~h~~G~k~gl~~~p 83 (348) T d1zy9a2 34 NFPFEVFQIDDAYEKDIGDWLVT-RGDFPSVEEMAKVIAENGFIPGIWTAP 83 (348) T ss_dssp GTTCSEEEECTTSEEETTEEEEE-CTTCCCHHHHHHHHHHTTCEEEEEECT T ss_pred CCCCCEEEECCCCCCCCCCCEEC-CCCCCCHHHHHHHHHHCCCEEEEEEEE T ss_conf 48985899895633589871279-000869899999998669878998630 No 280 >d1s2ma2 c.37.1.19 (A:252-422) Putative ATP-dependent RNA helicase DHH1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Probab=22.15 E-value=19 Score=13.46 Aligned_cols=21 Identities=19% Similarity=0.113 Sum_probs=12.9 Q ss_pred CHHHHHHHHHHHHCCCCEEEE Q ss_conf 489999999985247315987 Q gi|254780401|r 60 TPTALAIAKAVIDKNLKPGFL 80 (338) Q Consensus 60 TP~v~~l~~~l~~~g~~~~il 80 (338) .-.+.+|+..|...|+++..+ T Consensus 42 ~~~~~~l~~~L~~~g~~~~~~ 62 (171) T d1s2ma2 42 TNRVELLAKKITDLGYSCYYS 62 (171) T ss_dssp HHHHHHHHHHHHHHTCCEEEE T ss_pred EEHHHHHHHHHHCCCCCCCCC T ss_conf 413567677650133443334 No 281 >d2f7sa1 c.37.1.8 (A:5-190) Rab27b {Human (Homo sapiens) [TaxId: 9606]} Probab=22.15 E-value=15 Score=14.18 Aligned_cols=20 Identities=30% Similarity=0.529 Sum_probs=14.3 Q ss_pred CCEEEECCEEECCCCCCHHHHHH Q ss_conf 98899823000788874899999 Q gi|254780401|r 44 IPVICVGGFVMGGTGKTPTALAI 66 (338) Q Consensus 44 ~pVI~VGNitvGGtGKTP~v~~l 66 (338) +.|+.||+ .|+|||-+.-.+ T Consensus 6 ~Ki~ivG~---~~vGKTsLi~~l 25 (186) T d2f7sa1 6 IKLLALGD---SGVGKTTFLYRY 25 (186) T ss_dssp EEEEEESC---TTSSHHHHHHHH T ss_pred EEEEEECC---CCCCHHHHHHHH T ss_conf 89999999---991989999999 No 282 >d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]} Probab=22.03 E-value=19 Score=13.44 Aligned_cols=27 Identities=26% Similarity=0.337 Sum_probs=20.3 Q ss_pred ECCCCCCHHHHHHHHHHHHCCCCEEEEEE Q ss_conf 07888748999999998524731598760 Q gi|254780401|r 54 MGGTGKTPTALAIAKAVIDKNLKPGFLSR 82 (338) Q Consensus 54 vGGtGKTP~v~~l~~~l~~~g~~~~ilsR 82 (338) +||+|. +=.++++.|++.|+.+.+..| T Consensus 15 IGg~G~--mG~~la~~L~~~G~~V~~~d~ 41 (152) T d2pv7a2 15 VGGYGK--LGGLFARYLRASGYPISILDR 41 (152) T ss_dssp ETTTSH--HHHHHHHHHHTTTCCEEEECT T ss_pred ECCCCH--HHHHHHHHHHHCCCCCEECCC T ss_conf 968897--899999999976997385133 No 283 >d1umdb2 c.48.1.2 (B:188-324) Branched-chain alpha-keto acid dehydrogenase {Thermus thermophilus [TaxId: 274]} Probab=21.96 E-value=19 Score=13.43 Aligned_cols=32 Identities=22% Similarity=0.454 Sum_probs=26.3 Q ss_pred CCCEEEECCEEECCCCCCHHHHHHHHHHHHCCCCEEEEE Q ss_conf 898899823000788874899999999852473159876 Q gi|254780401|r 43 PIPVICVGGFVMGGTGKTPTALAIAKAVIDKNLKPGFLS 81 (338) Q Consensus 43 ~~pVI~VGNitvGGtGKTP~v~~l~~~l~~~g~~~~ils 81 (338) .+-+||.|+. ++.++..++.|++.|+++.++. T Consensus 17 dvtiis~G~~-------~~~al~aa~~L~~~gi~~~vid 48 (137) T d1umdb2 17 DLTLICYGTV-------MPEVLQAAAELAKAGVSAEVLD 48 (137) T ss_dssp SEEEEECGGG-------HHHHHHHHHHHHHTTCCEEEEE T ss_pred CEEEEECCHH-------HHHHHHHHHCCCCCCCCEEEEE T ss_conf 7999974633-------3201233200123685158875 No 284 >d1kdga1 c.3.1.2 (A:215-512,A:694-755) Flavoprotein domain of flavocytochrome cellobiose dehydrogenase (CDH), FAD-binding domain {Fungus (Phanerochaete chrysosporium) [TaxId: 5306]} Probab=21.95 E-value=17 Score=13.79 Aligned_cols=22 Identities=23% Similarity=0.231 Sum_probs=18.0 Q ss_pred HHHHHHHHHHCCCCEEEEEECC Q ss_conf 9999999852473159876045 Q gi|254780401|r 63 ALAIAKAVIDKNLKPGFLSRGY 84 (338) Q Consensus 63 v~~l~~~l~~~g~~~~ilsRGY 84 (338) =..+|..|.+.|++|.+|=||- T Consensus 14 G~v~A~rLae~g~~VlvLEaG~ 35 (360) T d1kdga1 14 GIIAADRLSEAGKKVLLLERGG 35 (360) T ss_dssp HHHHHHHHHHTTCCEEEECSSC T ss_pred HHHHHHHHHHCCCEEEEEECCC T ss_conf 9999999801879699998168 No 285 >d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]} Probab=21.82 E-value=19 Score=13.41 Aligned_cols=29 Identities=31% Similarity=0.379 Sum_probs=21.4 Q ss_pred EEECCCCCCHHHHHHHHHHHHCCCC-EEEEEE Q ss_conf 0007888748999999998524731-598760 Q gi|254780401|r 52 FVMGGTGKTPTALAIAKAVIDKNLK-PGFLSR 82 (338) Q Consensus 52 itvGGtGKTP~v~~l~~~l~~~g~~-~~ilsR 82 (338) |.+||+| =+-..+++.|.++|.+ +++++| T Consensus 13 lVTGgs~--GIG~a~a~~la~~Ga~~vvl~~R 42 (259) T d2fr1a1 13 LVTGGTG--GVGGQIARWLARRGAPHLLLVSR 42 (259) T ss_dssp EEETTTS--HHHHHHHHHHHHHTCSEEEEEES T ss_pred EEECCCC--HHHHHHHHHHHHCCCCEEEEEEC T ss_conf 9989876--89999999999879988999708 No 286 >d1m7ba_ c.37.1.8 (A:) RhoE (RND3) {Mouse (Mus musculus) [TaxId: 10090]} Probab=21.71 E-value=18 Score=13.69 Aligned_cols=23 Identities=30% Similarity=0.404 Sum_probs=15.9 Q ss_pred CCCEEEECCEEECCCCCCHHHHHHHH Q ss_conf 89889982300078887489999999 Q gi|254780401|r 43 PIPVICVGGFVMGGTGKTPTALAIAK 68 (338) Q Consensus 43 ~~pVI~VGNitvGGtGKTP~v~~l~~ 68 (338) .+.|+.||+ .|.|||-++..+.+ T Consensus 2 ~~KivliG~---~~vGKTsli~r~~~ 24 (179) T d1m7ba_ 2 KCKIVVVGD---SQCGKTALLHVFAK 24 (179) T ss_dssp EEEEEEEES---TTSSHHHHHHHHHH T ss_pred CEEEEEECC---CCCCHHHHHHHHHH T ss_conf 669999999---99598999999972 No 287 >d1m2ka_ c.31.1.5 (A:) AF1676, Sir2 homolog (Sir2-AF1?) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Probab=21.23 E-value=20 Score=13.33 Aligned_cols=20 Identities=10% Similarity=0.087 Sum_probs=9.1 Q ss_pred HHHHHHHHHHHHCCCCEEEEE Q ss_conf 899999999852473159876 Q gi|254780401|r 61 PTALAIAKAVIDKNLKPGFLS 81 (338) Q Consensus 61 P~v~~l~~~l~~~g~~~~ils 81 (338) +.-.+|++ |.++|+...|++ T Consensus 78 ~~H~~L~~-L~~~g~~~~iiT 97 (249) T d1m2ka_ 78 KAHQAFAE-LERLGVLKCLIT 97 (249) T ss_dssp HHHHHHHH-HHHTTCEEEEEE T ss_pred CHHHHHHH-HHHCCCCEEEEE T ss_conf 16699999-987298617886 No 288 >d1ky3a_ c.37.1.8 (A:) Rab-related protein ypt7p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Probab=21.21 E-value=20 Score=13.33 Aligned_cols=20 Identities=35% Similarity=0.481 Sum_probs=14.8 Q ss_pred CEEEECCEEECCCCCCHHHHHHH Q ss_conf 88998230007888748999999 Q gi|254780401|r 45 PVICVGGFVMGGTGKTPTALAIA 67 (338) Q Consensus 45 pVI~VGNitvGGtGKTP~v~~l~ 67 (338) .|+.||. .|+|||-++..+. T Consensus 4 Ki~~vG~---~~vGKSsLi~~~~ 23 (175) T d1ky3a_ 4 KVIILGD---SGVGKTSLMHRYV 23 (175) T ss_dssp EEEEECC---TTSSHHHHHHHHH T ss_pred EEEEECC---CCCCHHHHHHHHH T ss_conf 9999999---9969899999997 No 289 >d1psza_ c.92.2.2 (A:) Pneumococcal surface antigen PssA {Pneumococcus (Streptococcus pneumoniae) [TaxId: 1313]} Probab=21.20 E-value=20 Score=13.33 Aligned_cols=50 Identities=10% Similarity=0.106 Sum_probs=37.4 Q ss_pred HHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEECH Q ss_conf 57899988740100001221433234898999999997564798799854 Q gi|254780401|r 234 TEKFFTTVRQLGALIEQCYSFGDHAHLSDKKIAYLLDQAQQKGLILVTTA 283 (338) Q Consensus 234 P~~F~~~L~~~g~~i~~~~~fpDHh~ys~~dl~~i~~~a~~~~~~iiTTE 283 (338) ...|-...+.+|++..........-.-|.+++.++.+.+++.+...|-+| T Consensus 182 H~a~~Yf~~~ygl~~~~~~~~~~~~eps~~~l~~l~~~ik~~~v~~if~e 231 (286) T d1psza_ 182 EGAFKYFSKAYGVPSAYIWEINTEEEGTPEQIKTLVEKLRQTKVPSLFVE 231 (286) T ss_dssp ECCCHHHHHHHTCCEEEEESSTTSCSSCHHHHHHHHHHHHTSCCCCEEEE T ss_pred CCHHHHHHHHCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHCCCEEEEEE T ss_conf 44036677744874201021056334571689999999883782599990 No 290 >d1p1ja2 d.81.1.3 (A:323-437) Myo-inositol 1-phosphate synthase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Probab=21.13 E-value=20 Score=13.32 Aligned_cols=24 Identities=25% Similarity=0.447 Sum_probs=21.0 Q ss_pred CCCCHHHHHHHHHHHHCCCCEEEE Q ss_conf 887489999999985247315987 Q gi|254780401|r 57 TGKTPTALAIAKAVIDKNLKPGFL 80 (338) Q Consensus 57 tGKTP~v~~l~~~l~~~g~~~~il 80 (338) ||-|.+--.||..|..+|.+|--. T Consensus 1 tGqT~~ks~La~~l~~Rglkv~~~ 24 (115) T d1p1ja2 1 SGQTKLKSVLAQFLVDAGIKPVSI 24 (115) T ss_dssp CSHHHHHHHHHHHHHHTTCEEEEE T ss_pred CCCCHHHHHHHHHHHHCCCCCEEE T ss_conf 995118999999999769960379 No 291 >d1mb3a_ c.23.1.1 (A:) Cell division response regulator DivK {Caulobacter crescentus [TaxId: 155892]} Probab=20.99 E-value=19 Score=13.42 Aligned_cols=25 Identities=24% Similarity=0.381 Sum_probs=11.2 Q ss_pred CCCCCCHHHHHHHHCCCCCCEEEEC Q ss_conf 3465201225664102457479971 Q gi|254780401|r 117 TIVTSDRKIGVQMLLQEGVDIIIMD 141 (338) Q Consensus 117 v~V~~~R~~~~~~~~~~~~diiIlD 141 (338) |..+.+=.+|...+.+..+|+||+| T Consensus 28 v~~a~~~~~al~~~~~~~~dlil~D 52 (123) T d1mb3a_ 28 TLQTREGLSALSIARENKPDLILMD 52 (123) T ss_dssp EEEESCHHHHHHHHHHHCCSEEEEE T ss_pred EEEECCHHHHHHHHHHCCCCEEEEE T ss_conf 9997888999999981798889987 No 292 >d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]} Probab=20.95 E-value=20 Score=13.29 Aligned_cols=29 Identities=24% Similarity=0.245 Sum_probs=23.8 Q ss_pred EEECCCCCCHHHHHHHHHHHHCCCCEEEEEE Q ss_conf 0007888748999999998524731598760 Q gi|254780401|r 52 FVMGGTGKTPTALAIAKAVIDKNLKPGFLSR 82 (338) Q Consensus 52 itvGGtGKTP~v~~l~~~l~~~g~~~~ilsR 82 (338) |.+|||+ -+=..+|+.|.++|.+|.+.+| T Consensus 5 lITGas~--GIG~aiA~~la~~Ga~V~i~~~ 33 (241) T d1uaya_ 5 LVTGGAS--GLGRAAALALKARGYRVVVLDL 33 (241) T ss_dssp EEETTTS--HHHHHHHHHHHHHTCEEEEEES T ss_pred EEECCCC--HHHHHHHHHHHHCCCEEEEEEC T ss_conf 9928988--8999999999987998999978 No 293 >d1g7sa4 c.37.1.8 (A:1-227) Initiation factor IF2/eIF5b, N-terminal (G) domain {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]} Probab=20.92 E-value=20 Score=13.29 Aligned_cols=22 Identities=32% Similarity=0.481 Sum_probs=15.5 Q ss_pred CCEEEECCEEECC--CCCCHHHHHHHHH Q ss_conf 9889982300078--8874899999999 Q gi|254780401|r 44 IPVICVGGFVMGG--TGKTPTALAIAKA 69 (338) Q Consensus 44 ~pVI~VGNitvGG--tGKTP~v~~l~~~ 69 (338) -||||| +|. +|||-++-.|... T Consensus 5 ~p~IaI----iGh~d~GKSTL~~~L~~~ 28 (227) T d1g7sa4 5 SPIVSV----LGHVDHGKTTLLDHIRGS 28 (227) T ss_dssp CCEEEE----ECSTTSSHHHHHHHHHHH T ss_pred CCEEEE----EECCCCCHHHHHHHHHHH T ss_conf 987999----969985499999999823 No 294 >d1m3sa_ c.80.1.3 (A:) Hypothetical protein YckF {Bacillus subtilis [TaxId: 1423]} Probab=20.90 E-value=20 Score=13.28 Aligned_cols=20 Identities=10% Similarity=0.137 Sum_probs=13.6 Q ss_pred HHHHHHHHHHHHCCCCEEEE Q ss_conf 89999999985247315987 Q gi|254780401|r 61 PTALAIAKAVIDKNLKPGFL 80 (338) Q Consensus 61 P~v~~l~~~l~~~g~~~~il 80 (338) +++.+++..|...|+.+..+ T Consensus 50 ~~a~~~~~~l~~lg~~~~~~ 69 (186) T d1m3sa_ 50 LMAKSFAMRLMHMGFNAHIV 69 (186) T ss_dssp HHHHHHHHHHHHTTCCEEET T ss_pred HHHHHHHHHHHHCCCCCCCC T ss_conf 99999999987356777767 No 295 >d1jeoa_ c.80.1.3 (A:) Probable 3-hexulose-6-phosphate isomerase MJ1247 {Archaeon Methanococcus jannaschii [TaxId: 2190]} Probab=20.88 E-value=20 Score=13.28 Aligned_cols=93 Identities=12% Similarity=0.045 Sum_probs=42.4 Q ss_pred HHHHHHHHHHHHCCCCEEEEEECCCCCCCCCEEEECCCCCHHHHCCHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCEEEE Q ss_conf 89999999985247315987604578777755871456788770421233220576346520122566410245747997 Q gi|254780401|r 61 PTALAIAKAVIDKNLKPGFLSRGYGRKSRISFRVDLEKHSAYDVGDEPLLLARRAVTIVTSDRKIGVQMLLQEGVDIIIM 140 (338) Q Consensus 61 P~v~~l~~~l~~~g~~~~ilsRGYg~~~~~~~~v~~~~~~~~~vGDEp~lla~~~pv~V~~~R~~~~~~~~~~~~diiIl 140 (338) +.+.+++..|...|+....++...-... +-||=-..++..+ -.++=.+.++.+.+.++.+|.. T Consensus 50 ~~a~~~~~~l~~lg~~~~~~~~~~~~~~--------------~~~Dl~I~iS~sG---~t~~~i~~~~~ak~~g~~vI~I 112 (177) T d1jeoa_ 50 YIGRCFAMRLMHLGFKSYFVGETTTPSY--------------EKDDLLILISGSG---RTESVLTVAKKAKNINNNIIAI 112 (177) T ss_dssp HHHHHHHHHHHHTTCCEEETTSTTCCCC--------------CTTCEEEEEESSS---CCHHHHHHHHHHHTTCSCEEEE T ss_pred HHHHHHHHHHHHCCCCCCCCCCCCCCCC--------------CCCCEEEEECCCC---CHHHHHHHHHHHHHCCCCEEEE T ss_conf 9999999999965974201333234556--------------7777688713330---2689999999998759943677 Q ss_pred CCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCHHH Q ss_conf 18322344123069999618433566553761365 Q gi|254780401|r 141 DDGFHSADLQADFSLIVVNSHRGLGNGLVFPAGPL 175 (338) Q Consensus 141 DDGfQh~~l~rdl~Ivl~d~~~~~gn~~llPaGpL 175 (338) =. ..+ .+.+--|+++.- +.+.....|.|+. T Consensus 113 T~-~~~-~l~~~aD~~l~~---~~~~~~~~~~~~~ 142 (177) T d1jeoa_ 113 VC-ECG-NVVEFADLTIPL---EVKKSKYLPMGTT 142 (177) T ss_dssp ES-SCC-GGGGGCSEEEEC---CCCCBTTBCTTHH T ss_pred EC-CCC-CHHHHCCCEEEE---EECCCCCCCCCHH T ss_conf 36-888-679856836998---6435435657469 No 296 >d1nkta1 a.162.1.1 (A:226-349) Pre-protein crosslinking domain of SecA {Mycobacterium tuberculosis [TaxId: 1773]} Probab=20.72 E-value=20 Score=13.26 Aligned_cols=43 Identities=16% Similarity=0.320 Sum_probs=29.9 Q ss_pred HHHHHCCCCCCEEEECCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCHHHHHCCHHHH Q ss_conf 5664102457479971832234412306999961843356655376136521002556 Q gi|254780401|r 126 GVQMLLQEGVDIIIMDDGFHSADLQADFSLIVVNSHRGLGNGLVFPAGPLRVPLSRQL 183 (338) Q Consensus 126 ~~~~~~~~~~diiIlDDGfQh~~l~rdl~Ivl~d~~~~~gn~~llPaGpLREp~~~~l 183 (338) -|..+.+.+.|.||-|+ +|+++|.. .|+++|-=.+.+.+..++ T Consensus 71 ~A~~lf~~d~dYiV~d~-----------~v~ivDe~----TGR~~~grr~s~GLHQai 113 (124) T d1nkta1 71 KAKELFSRDKDYIVRDG-----------EVLIVDEF----TGRVLIGRRYNEGMHQAI 113 (124) T ss_dssp HHHHHCCBTTTEEECSS-----------CEEEBCSS----SCCBCTTCCCSTTHHHHH T ss_pred HHHHHHHCCCEEEEECC-----------EEEEEECC----CCCCCCCCCCCHHHHHHH T ss_conf 87775206953897448-----------69997345----887515878371789999 No 297 >d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Probab=20.54 E-value=21 Score=13.23 Aligned_cols=31 Identities=29% Similarity=0.391 Sum_probs=23.4 Q ss_pred EEECCCCCCHHHHHHHHHHHHCCCCEEEE---EECC Q ss_conf 00078887489999999985247315987---6045 Q gi|254780401|r 52 FVMGGTGKTPTALAIAKAVIDKNLKPGFL---SRGY 84 (338) Q Consensus 52 itvGGtGKTP~v~~l~~~l~~~g~~~~il---sRGY 84 (338) +.+||||= +=.+|++.|.++|++|.++ ||++ T Consensus 5 LVTGatGf--iG~~lv~~Ll~~g~~V~~iDnl~~~~ 38 (393) T d1i24a_ 5 MVIGGDGY--CGWATALHLSKKNYEVCIVDNLVRRL 38 (393) T ss_dssp EEETTTSH--HHHHHHHHHHHTTCEEEEEECCHHHH T ss_pred EEECCCCH--HHHHHHHHHHHCCCEEEEEECCCCCC T ss_conf 99899848--99999999997859899994677542 No 298 >d1xvla1 c.92.2.2 (A:49-327) Mn transporter MntC {Synechocystis sp. pcc 6803 [TaxId: 1148]} Probab=20.47 E-value=21 Score=13.22 Aligned_cols=51 Identities=8% Similarity=0.173 Sum_probs=37.5 Q ss_pred HHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEECHH Q ss_conf 578999887401000012214332348989999999975647987998546 Q gi|254780401|r 234 TEKFFTTVRQLGALIEQCYSFGDHAHLSDKKIAYLLDQAQQKGLILVTTAK 284 (338) Q Consensus 234 P~~F~~~L~~~g~~i~~~~~fpDHh~ys~~dl~~i~~~a~~~~~~iiTTEK 284 (338) ...|-...+.+|++.+..+.-.....-|.+++.++.+.+++.+...|.+|. T Consensus 172 H~a~~Yf~~~~gl~~~~~~~~~~~~~ps~~~l~~l~~~ik~~~v~~if~e~ 222 (279) T d1xvla1 172 EGAFSYLARDYGMEEIYMWPINAEQQFTPKQVQTVIEEVKTNNVPTIFCES 222 (279) T ss_dssp ESTTHHHHHHTTCEEEEEESSSSSCSCCHHHHHHHHHHHHTTTCSEEEEET T ss_pred CCCCHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECC T ss_conf 453013566369626630256885668988999999998754861898247 No 299 >d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} Probab=20.35 E-value=21 Score=13.21 Aligned_cols=36 Identities=17% Similarity=0.270 Sum_probs=27.4 Q ss_pred CCCCCEEEECCEEECCCCCCHHHHHHHHHHHHCCCCEEEEEECC Q ss_conf 38898899823000788874899999999852473159876045 Q gi|254780401|r 41 HAPIPVICVGGFVMGGTGKTPTALAIAKAVIDKNLKPGFLSRGY 84 (338) Q Consensus 41 ~~~~pVI~VGNitvGGtGKTP~v~~l~~~l~~~g~~~~ilsRGY 84 (338) +.|-.|+.||. . +.-..+|..|.+.|.+|.++.|+= T Consensus 20 ~~p~~v~IiGg-----G---~ig~E~A~~l~~~G~~Vtlve~~~ 55 (117) T d1ebda2 20 EVPKSLVVIGG-----G---YIGIELGTAYANFGTKVTILEGAG 55 (117) T ss_dssp SCCSEEEEECC-----S---HHHHHHHHHHHHTTCEEEEEESSS T ss_pred HCCCEEEEECC-----C---CCCEEEEEEECCCCCEEEEEEECC T ss_conf 16986999999-----8---652164430012551799997313 No 300 >d1azta2 c.37.1.8 (A:35-65,A:202-391) Transducin (alpha subunit) {Cow (Bos taurus) [TaxId: 9913]} Probab=20.33 E-value=15 Score=14.13 Aligned_cols=22 Identities=23% Similarity=0.453 Sum_probs=15.7 Q ss_pred CCCCEEEECCEEECCCCCCHHHHHH Q ss_conf 8898899823000788874899999 Q gi|254780401|r 42 APIPVICVGGFVMGGTGKTPTALAI 66 (338) Q Consensus 42 ~~~pVI~VGNitvGGtGKTP~v~~l 66 (338) ....|+.+|. +|+|||-++..+ T Consensus 5 ~~~KilllG~---~~vGKTsll~~~ 26 (221) T d1azta2 5 ATHRLLLLGA---GESGKSTIVKQM 26 (221) T ss_dssp HSEEEEEECS---TTSSHHHHHHHH T ss_pred HCCEEEEECC---CCCCHHHHHHHH T ss_conf 3477999989---999889999989 No 301 >d1vima_ c.80.1.3 (A:) Hypothetical protein AF1796 {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Probab=20.32 E-value=21 Score=13.20 Aligned_cols=32 Identities=19% Similarity=0.297 Sum_probs=21.6 Q ss_pred CEEEECCEEECCCCCCHHHHHHHHHHHHCCCCEEEEE Q ss_conf 8899823000788874899999999852473159876 Q gi|254780401|r 45 PVICVGGFVMGGTGKTPTALAIAKAVIDKNLKPGFLS 81 (338) Q Consensus 45 pVI~VGNitvGGtGKTP~v~~l~~~l~~~g~~~~ils 81 (338) .|..+|. |+++ +++.+++..|...|+.+..++ T Consensus 42 ~I~i~G~---G~S~--~~a~~~~~~l~~lg~~~~~~~ 73 (192) T d1vima_ 42 SIFVIGA---GRSG--YIAKAFAMRLMHLGYTVYVVG 73 (192) T ss_dssp CEEEECS---HHHH--HHHHHHHHHHHHTTCCEEETT T ss_pred CEEEEEC---CCCH--HHHHHHHHHHCCCCCCCCCCC T ss_conf 6899966---7310--025666653024465521011 No 302 >d1xpma2 c.95.1.2 (A:168-388) 3-hydroxy-3-methylglutaryl CoA synthase MvaS {Staphylococcus aureus [TaxId: 1280]} Probab=20.26 E-value=21 Score=13.19 Aligned_cols=20 Identities=25% Similarity=0.474 Sum_probs=10.8 Q ss_pred CCCCCEEEEEE-CCCCHHHHH Q ss_conf 11686389874-155357899 Q gi|254780401|r 219 DLSGKKVLAFS-GIADTEKFF 238 (338) Q Consensus 219 ~l~~k~v~afs-GIa~P~~F~ 238 (338) .+.|+++.+|| |=|--..|| T Consensus 127 ~~~G~rIglfSYGSG~~ae~f 147 (221) T d1xpma2 127 LQAGETIGLFSYGSGSVGEFY 147 (221) T ss_dssp CCTTCEEEEEEEETTTEEEEE T ss_pred CCCCCEEEEEEECCCCCEEEE T ss_conf 789898999975688403688 No 303 >d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]} Probab=20.21 E-value=21 Score=13.19 Aligned_cols=29 Identities=21% Similarity=0.298 Sum_probs=22.3 Q ss_pred EECCCCCCHHHHHHHHHHHHCCCCEEEEEEC Q ss_conf 0078887489999999985247315987604 Q gi|254780401|r 53 VMGGTGKTPTALAIAKAVIDKNLKPGFLSRG 83 (338) Q Consensus 53 tvGGtGKTP~v~~l~~~l~~~g~~~~ilsRG 83 (338) .+||||= +=-+|++.|.++|++|..+.|- T Consensus 16 VTG~sGf--IGs~l~~~Ll~~G~~V~~~vR~ 44 (342) T d1y1pa1 16 VTGANGF--VASHVVEQLLEHGYKVRGTARS 44 (342) T ss_dssp EETTTSH--HHHHHHHHHHHTTCEEEEEESS T ss_pred EECCCCH--HHHHHHHHHHHCCCEEEEEECC T ss_conf 9799889--9999999999785989999688 No 304 >d1ys7a2 c.23.1.1 (A:7-127) Transcriptional regulatory protein PrrA, N-terminal domain {Mycobacterium tuberculosis [TaxId: 1773]} Probab=20.19 E-value=21 Score=13.18 Aligned_cols=25 Identities=16% Similarity=0.237 Sum_probs=11.3 Q ss_pred CCCCCCHHHHHHHHCCCCCCEEEEC Q ss_conf 3465201225664102457479971 Q gi|254780401|r 117 TIVTSDRKIGVQMLLQEGVDIIIMD 141 (338) Q Consensus 117 v~V~~~R~~~~~~~~~~~~diiIlD 141 (338) |..+.+-.+|.+.+.+..+|+||+| T Consensus 28 v~~a~~~~eal~~~~~~~~dlvl~D 52 (121) T d1ys7a2 28 VATAVDGAEALRSATENRPDAIVLD 52 (121) T ss_dssp EEEESSHHHHHHHHHHSCCSEEEEE T ss_pred EEEECCHHHHHHHHHHCCCCEEEEE T ss_conf 9998788999999982798789977 No 305 >d1ydya1 c.1.18.3 (A:29-356) Glycerophosphodiester phosphodiesterase GlpQ {Escherichia coli [TaxId: 562]} Probab=20.19 E-value=21 Score=13.18 Aligned_cols=47 Identities=21% Similarity=0.305 Sum_probs=24.3 Q ss_pred HHHHHHHCC-CCCCCCCHHHHHHHHCCCCCCEEEECCCCCCCCCCCEEEEEEE Q ss_conf 123322057-6346520122566410245747997183223441230699996 Q gi|254780401|r 107 EPLLLARRA-VTIVTSDRKIGVQMLLQEGVDIIIMDDGFHSADLQADFSLIVV 158 (338) Q Consensus 107 Ep~lla~~~-pv~V~~~R~~~~~~~~~~~~diiIlDDGfQh~~l~rdl~Ivl~ 158 (338) +|+.+++++ +-..-+|-..|.+.+.+.|+|.|=+| -++-+|-.+|+. T Consensus 2 ~~liIaHRG~~~~~PENTl~af~~A~~~gad~iE~D-----V~lTkDg~~Vv~ 49 (328) T d1ydya1 2 EKIVIAHRGASGYLPEHTLPAKAMAYAQGADYLEQD-----LVMTKDDNLVVL 49 (328) T ss_dssp CCEEEETTTTTTTSSTTCHHHHHHHHHTTCSEEEEE-----EEECTTSCEEEC T ss_pred CCEEEECCCCCCCCCCCHHHHHHHHHHCCCCEEEEE-----EEECCCCCEEEE T ss_conf 978995899888997447999999998697999985-----428459968997 No 306 >d1vd6a1 c.1.18.3 (A:8-224) Putative glycerophosphodiester phosphodiesterase TTHB141 {Thermus thermophilus [TaxId: 274]} Probab=20.16 E-value=21 Score=13.20 Aligned_cols=47 Identities=21% Similarity=0.230 Sum_probs=29.5 Q ss_pred HHHHHHCC-CCCCCCCHHHHHHHHCCCCCCEEEECCCCCCCCCCCEEEEEEEC Q ss_conf 23322057-63465201225664102457479971832234412306999961 Q gi|254780401|r 108 PLLLARRA-VTIVTSDRKIGVQMLLQEGVDIIIMDDGFHSADLQADFSLIVVN 159 (338) Q Consensus 108 p~lla~~~-pv~V~~~R~~~~~~~~~~~~diiIlDDGfQh~~l~rdl~Ivl~d 159 (338) |+.+|+++ +.-.-+|-..|.+.+.+.|+|.|=+| -++-+|=.+|+.. T Consensus 1 P~iiaHRG~~~~~pENT~~a~~~a~~~G~~~iE~D-----V~~TkDg~~vv~H 48 (217) T d1vd6a1 1 PLRLGHRGAPLKAKENTLESFRLALEAGLDGVELD-----VWPTRDGVFAVRH 48 (217) T ss_dssp CEEEEETSCTTTSCTTSHHHHHHHHHTTCSEEEEE-----EEECTTSCEEECS T ss_pred CEEEECCCCCCCCCCHHHHHHHHHHHCCCCEEEEE-----EEEECCCCEEEEC T ss_conf 95997799999998305999999998598989998-----8895599878854 No 307 >d2oi6a2 c.68.1.5 (A:4-251) N-acetylglucosamine 1-phosphate uridyltransferase GlmU, N-terminal domain {Escherichia coli [TaxId: 562]} Probab=20.01 E-value=21 Score=13.16 Aligned_cols=38 Identities=18% Similarity=0.179 Sum_probs=29.3 Q ss_pred CCCCEEEECCEEECCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCC Q ss_conf 8898899823000788874899999999852473159876045787 Q gi|254780401|r 42 APIPVICVGGFVMGGTGKTPTALAIAKAVIDKNLKPGFLSRGYGRK 87 (338) Q Consensus 42 ~~~pVI~VGNitvGGtGKTP~v~~l~~~l~~~g~~~~ilsRGYg~~ 87 (338) .|-|.|.||+ | |+..+..+.|++.|..-.++.-||+.. T Consensus 20 ~PKpli~i~g-------k-piie~~i~~l~~~~~~~iiiv~~~~~~ 57 (248) T d2oi6a2 20 LPKVLHTLAG-------K-AMVQHVIDAANELGAAHVHLVYGHGGD 57 (248) T ss_dssp SCGGGSEETT-------E-EHHHHHHHHHHHHTCSCEEEEESSCHH T ss_pred CCEEEEEECC-------H-HHHHHHHHHHHHCCCCEEEECCCCCCC T ss_conf 8922079998-------1-299999999997699679850576644 Done!