HHsearch alignment for GI: 254780402 and conserved domain: PRK00025

>PRK00025 lpxB lipid-A-disaccharide synthase; Reviewed.
Probab=99.50  E-value=1.2e-11  Score=96.23  Aligned_cols=332  Identities=18%  Similarity=0.172  Sum_probs=199.4

Q ss_pred             EEEEECCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHCCC---CCC----E-------EEEECCCCCCHHHHHHH
Q ss_conf             999817899999999999999861998999962776300121014---774----1-------68850557201344557
Q gi|254780402|r   59 IWFHASSVGETMALIGLIPAIRSRHVNVLLTTMTATSAKVARKYL---GQY----A-------IHQYAPLDIQPAVSRFL  124 (440)
Q Consensus        59 IW~HaaSvGE~~~a~pli~~l~~~~~~iliT~~T~tg~~~~~~~~---~~~----~-------~~~y~P~D~~~~~~~fl  124 (440)
T Consensus         4 ifi~aGE~SGD~~ga~li~~Lk~~~~~~~~~--GiGG~~M~~~G~~~l~d~~~l~vmG~~evl~~~~~~~~~~~~~~~~i   81 (382)
T PRK00025          4 IAIVAGEVSGDLLGAGLIRALKAQAPNLEFV--GIGGPRMEAAGFESLFDMEELAVMGLVEVLPRLPRLLKIRKELKRLL   81 (382)
T ss_pred             EEEEECCCCHHHHHHHHHHHHHHHCCCCEEE--EECCHHHHHCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             9999068418899999999998319896799--98829999769954477578313019999977999999999999999


Q ss_pred             HHHCCEEEEEECCCCHHHH----HHHHHHC--CCCEEEEEECCCCCCCCCCHHHHHHHHHCCCCCCEEEECCHHHHHHHH
Q ss_conf             4420203564047621467----8887422--455058641266542121001111233102644236641577888998
Q gi|254780402|r  125 KYWKPDCMILSESDIWPLT----VFELSKQ--RIPQVLVNARMSRRSFKNWKTVLSFSKKIFSQFSLVIVQSERYFRRYK  198 (440)
Q Consensus       125 ~~~~P~~~i~~e~ElWPnl----i~~~~~~--~ip~~linarls~~S~~~~~~~~~l~~~~~~~~~~i~~qs~~~~~rl~  198 (440)
T Consensus        82 ~~~~Pd~vi~ID~---pgFnlrlak~lkk~~~~ipvi~yv~------PqvWAWr~~R~k~~~~~~D~ll~ifPFE~~~f~  152 (382)
T PRK00025         82 LAEPPDVFILIDA---PDFNLRLAKKLKKALPGIPIIHYVS------PSVWAWRPGRAKKIAKATDHVLAILPFEAAFYD  152 (382)
T ss_pred             HHCCCCEEEEECC---CHHHHHHHHHHHHHCCCCCEEEEEC------CHHHHCCCCHHHHHHHHHHHHHCCCCCCHHHHH
T ss_conf             8649999999778---3065999999997169998899947------156540641899999999876108765689998


Q ss_pred             HHCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCEE-ECCCCCCCCCCCC----CCCCCCCC-CCCCEEEEEEECC
Q ss_conf             6088505872043101234422125689999861798617-5046553321000----00000001-2341248897055
Q gi|254780402|r  199 ELGAQKLIVSGNLKIDTESLPCDKELLSLYQESIAGRYTW-AAISTFEGEEDKA----VYVHNFIK-CRTDVLTIIVPRH  272 (440)
Q Consensus       199 ~lG~~~i~v~GnlK~d~~~~~~~~~~~~~~~~~~~~r~v~-vagSth~~EE~~i----l~a~~~l~-~~~~~~lIIvPRh  272 (440)
T Consensus       153 ~~g~~-~~fVGHPl~d~~~~~~~~~~~~~~~~~~~~~~~i~lLPGSR~~EI~~~lPi~l~a~~~l~~~~p~~~fvi-p~~  230 (382)
T PRK00025        153 KLGVP-VTYVGHPLADEIPLEPDRAAARAELGLDPDARVLALLPGSRGSEIKRLLPTFLEAAQLLQQRYPDLRFVV-PLA  230 (382)
T ss_pred             HCCCC-CEECCCCHHHHCCCCCCHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEE-ECC
T ss_conf             65998-1356981564322356879999873998556617870588589999978999999999998789939999-558


Q ss_pred             CCHH-HHHHHHHHHHCCHHHHHCCCCCCCCCCEEEEECCCCCCHHHHHHCCCEEEECCCCCCCCCCHHHHHHHCCCEEEC
Q ss_conf             2114-788877653001011001344444664167506765202554220820661355444545837689619949998
Q gi|254780402|r  273 PRRC-DAIERRLIAKGLKVARRSRGDVINAEVDIFLGDTIGEMGFYLRMTEIAFIGRSFCASGGQNPLEAAMLGCAILSG  351 (440)
Q Consensus       273 peR~-~~i~~~l~~~gl~~~~~S~~~~~~~~~~V~i~Dt~GeL~~lY~~AdiafVGGSl~~~GGhN~lEpaa~G~pVi~G  351 (440)
T Consensus       231 ~~~~~~~i~~~~~~~~~-------------~~~i~~~--~~~~~~~l~~sd~ai~~S------GTaTLE~al~~~P~Vv~  289 (382)
T PRK00025        231 NPKRREQFEQLLAEYAP-------------DLSVTLL--DGQAREAMAAADAALAAS------GTVTLEAALLGVPMVVG  289 (382)
T ss_pred             CHHHHHHHHHHHHHCCC-------------CCCEEEE--CCCCHHHHHHCCEEEECC------CHHHHHHHHHCCCEEEE
T ss_conf             87789999999984799-------------9838982--684177887388876537------77999999971985899


Q ss_pred             CCCCCHHH-HHHHHHHCCCEEEEC----------------CHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH-CCCHHHH
Q ss_conf             98443799-999999789869957----------------98999999999958989999999999999970-4556999
Q gi|254780402|r  352 PNVENFRD-IYRRMVSSGAVRIVE----------------EVGTLADMVYSLLSEPTIRYEMINAAINEVKK-MQGPLKI  413 (440)
Q Consensus       352 P~~~nf~e-~~~~L~~~g~~~~v~----------------d~~eL~~~l~~ll~d~~~~~~~~~~a~~~i~~-~~ga~~~  413 (440)
T Consensus       290 Yk~~~lt~~i~k~lvkv~~isL~Nii~~k~ivPEllQ~~~~~~~i~~~~~~ll~d~~~~~~~~~~~~~lr~~L~~gas~r  369 (382)
T PRK00025        290 YKVKPLTFWIAKRLVKVPYISLPNLLAGEELVPELLQEEATPEKLARALLELLADGARRQALLEGFTELHQYLRCGAAER  369 (382)
T ss_pred             EECCHHHHHHHHHHHCCCEEEHHHHHCCCCCCHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHH
T ss_conf             80789999999996569976524875499766134056699999999999996699999999999999999857899999


Q ss_pred             HHHHHHHHHHH
Q ss_conf             99999975237
Q gi|254780402|r  414 TLRSLDSYVNP  424 (440)
Q Consensus       414 ~~~~i~~~l~~  424 (440)
T Consensus       370 aA~~Il~~l~~  380 (382)
T PRK00025        370 AAQAVLELLKQ  380 (382)
T ss_pred             HHHHHHHHHHH
T ss_conf             99999999973