HHsearch alignment for GI: 254780402 and conserved domain: PRK00654
>PRK00654 glgA glycogen synthase; Provisional.
Probab=98.32 E-value=4.4e-05 Score=53.09 Aligned_cols=256 Identities=17% Similarity=0.161 Sum_probs=133.0
Q ss_pred HHCCEEEEEEC--CCCHHHHHHHHHHCCCCEEEE--EE----CCCCCCCC---------------CCHHHHHHHHHCCCC
Q ss_conf 42020356404--762146788874224550586--41----26654212---------------100111123310264
Q gi|254780402|r 126 YWKPDCMILSE--SDIWPLTVFELSKQRIPQVLV--NA----RMSRRSFK---------------NWKTVLSFSKKIFSQ 182 (440)
Q Consensus 126 ~~~P~~~i~~e--~ElWPnli~~~~~~~ip~~li--na----rls~~S~~---------------~~~~~~~l~~~~~~~ 182 (440)
T Consensus 129 ~~~pDIIH~HDW~t~lvp~~lk~~~~~~~~~V~TIHnl~yQG~~~~~~~~~~gl~~~~~~~~~~e~~~~~-n~lk~gi~~ 207 (476)
T PRK00654 129 GWRPDIVHAHDWHTGLVPALLKERGRPPIKSVFTIHNLAYQGLFPAEHLGALGLPDERFHLEGLEFYGQI-SFLKAGLYY 207 (476)
T ss_pred CCCCCEEEECCHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCHHHHHHCCCCHHHHCCCHHHHCCCH-HHHHHHHHH
T ss_conf 7888867854647789999999743789977999734201676688789665995676243000104502-788898875
Q ss_pred CCEEEECCHHHHHHHHH--HC--------C--CCEEEECC-C-------CCCCCCC---CC-----CHHHHHHHHHHCC-
Q ss_conf 42366415778889986--08--------8--50587204-3-------1012344---22-----1256899998617-
Q gi|254780402|r 183 FSLVIVQSERYFRRYKE--LG--------A--QKLIVSGN-L-------KIDTESL---PC-----DKELLSLYQESIA- 233 (440)
Q Consensus 183 ~~~i~~qs~~~~~rl~~--lG--------~--~~i~v~Gn-l-------K~d~~~~---~~-----~~~~~~~~~~~~~- 233 (440)
T Consensus 208 aD~v~tVS~~Ya~Ei~~~~~g~gL~~~l~~~~~kl~gI~NGiD~~~wnP~tD~~l~~~y~~~~~~~K~~~k~~l~~~~gl 287 (476)
T PRK00654 208 ADRVTTVSPTYAREITTPEFGYGLEGLLRARQGKLSGILNGIDYDIWNPETDPYLPANYSADDLEGKAENKRALQERFGL 287 (476)
T ss_pred CCEEEECCHHHHHHHCCCCCCCCHHHHHHHCCCCEEEECCCCCHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCC
T ss_conf 78748737888876616334666678876356666684488771003998786511666810033169899999999498
Q ss_pred ----CCCEEECCCC---CCCCCCCCCCCCC-CCCCCCCEEEEEEECCCCHHH-HHHHHHHHHCCHHHHHCCCCCCCCCCE
Q ss_conf ----9861750465---5332100000000-001234124889705521147-888776530010110013444446641
Q gi|254780402|r 234 ----GRYTWAAIST---FEGEEDKAVYVHN-FIKCRTDVLTIIVPRHPRRCD-AIERRLIAKGLKVARRSRGDVINAEVD 304 (440)
Q Consensus 234 ----~r~v~vagSt---h~~EE~~il~a~~-~l~~~~~~~lIIvPRhpeR~~-~i~~~l~~~gl~~~~~S~~~~~~~~~~ 304 (440)
T Consensus 288 ~~~~~~pl~~~vgRl~~qKG-~~ll~~a~~~~~~~--~~~~vi~G~G~~~~~~~l~~l~~~~------------~-~~~~ 351 (476)
T PRK00654 288 PVDDDAPLFAMVSRLTEQKG-LDLVLEALDEILEQ--GGQLVLLGTGDPELEEAFRALAARY------------P-GRVG 351 (476)
T ss_pred CCCCCCCEEEEEEECCCCCC-HHHHHHHHHHHHHC--CCEEEEEECCCHHHHHHHHHHHHHC------------C-CCEE
T ss_conf 97899748999851645678-89999999999970--9989999459789999999999877------------9-8889
Q ss_pred EEEECCCCCCH-HHHHHCCCEEEECCCCCCCCCCHHHHHHHCC-CEEECCCCCCHHHHHHHH---HHCCCEEEE--CCHH
Q ss_conf 67506765202-5542208206613554445458376896199-499989844379999999---978986995--7989
Q gi|254780402|r 305 IFLGDTIGEMG-FYLRMTEIAFIGRSFCASGGQNPLEAAMLGC-AILSGPNVENFRDIYRRM---VSSGAVRIV--EEVG 377 (440)
Q Consensus 305 V~i~Dt~GeL~-~lY~~AdiafVGGSl~~~GGhN~lEpaa~G~-pVi~GP~~~nf~e~~~~L---~~~g~~~~v--~d~~ 377 (440)
T Consensus 352 ~~~g-f~e~l~~~iya~aD~-~lmPS~~EP~Gl~qleAm~~Gt~Pvv~~--tGGL~dtV~d~~~~~~~~tGf~f~~~~~~ 427 (476)
T PRK00654 352 VQIG-YDEALAHRIYAGADF-FLMPSRFEPCGLTQLYALRYGTLPIVRR--TGGLADTVIDYDPEDGGATGFVFDDFNAE 427 (476)
T ss_pred EEEC-CCHHHHHHHHHHCCE-EECCCCCCCCCHHHHHHHHCCCCCEEEC--CCCCCCCCCCCCCCCCCCCEEEECCCCHH
T ss_conf 9957-886898999872887-8645611367768999987699858817--99975514566667787634873799999
Q ss_pred HHHHHHH---HHHCCHHHHHHHHHHHHH
Q ss_conf 9999999---995898999999999999
Q gi|254780402|r 378 TLADMVY---SLLSEPTIRYEMINAAIN 402 (440)
Q Consensus 378 eL~~~l~---~ll~d~~~~~~~~~~a~~ 402 (440)
T Consensus 428 ~l~~ai~~al~~~~~~~~~~~l~~~~m~ 455 (476)
T PRK00654 428 DLLTALRRALELYRQPDLWRALQRQAMA 455 (476)
T ss_pred HHHHHHHHHHHHHCCHHHHHHHHHHHHH
T ss_conf 9999999999885699999999999852