HHsearch alignment for GI: 254780402 and conserved domain: PRK01021
>PRK01021 lpxB lipid-A-disaccharide synthase; Reviewed.
Probab=98.86 E-value=2e-07 Score=68.49 Aligned_cols=318 Identities=11% Similarity=-0.003 Sum_probs=177.4
Q ss_pred HHHHHHHHHHHHCCCCEEEEECCCCCCHHHHCCC----CC-CEEE-EEC-CC-------CCCHHHHHHHHHHCCEEEEEE
Q ss_conf 9999999999861998999962776300121014----77-4168-850-55-------720134455744202035640
Q gi|254780402|r 70 MALIGLIPAIRSRHVNVLLTTMTATSAKVARKYL----GQ-YAIH-QYA-PL-------DIQPAVSRFLKYWKPDCMILS 135 (440)
Q Consensus 70 ~~a~pli~~l~~~~~~iliT~~T~tg~~~~~~~~----~~-~~~~-~y~-P~-------D~~~~~~~fl~~~~P~~~i~~ 135 (440)
T Consensus 240 ~lGa~Li~~Lk~~~P~i--~F~GVGGp~M~~eGl~slf~me~lsVMG~~EVL~~lp~L~~~~~~l~~~i~~~~PD~~I~I 317 (607)
T PRK01021 240 TLGGNLLKEIKALYPDI--RCFGVGGPQMRQEGLEPLFNMEEFQVSGFWEVLLSLFKLYYRYRKLYKTILKENPETVICI 317 (607)
T ss_pred HHHHHHHHHHHHHCCCC--EEEECCHHHHHHCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEE
T ss_conf 77999999998549898--8996377999876886124467710114899998899999999999999986199999995
Q ss_pred CCC-CHHHHHHHHHHCCC--CEEE-EEECCCCCCCCCCHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHCCCCEEEECCC
Q ss_conf 476-21467888742245--5058-6412665421210011112331026442366415778889986088505872043
Q gi|254780402|r 136 ESD-IWPLTVFELSKQRI--PQVL-VNARMSRRSFKNWKTVLSFSKKIFSQFSLVIVQSERYFRRYKELGAQKLIVSGNL 211 (440)
Q Consensus 136 e~E-lWPnli~~~~~~~i--p~~l-inarls~~S~~~~~~~~~l~~~~~~~~~~i~~qs~~~~~rl~~lG~~~i~v~Gnl 211 (440)
T Consensus 318 D~PdFNlrlak~lkk~gi~ik~vhYVsP-------sVWAWr~~R~k~i~~~vD~~l~lfPFE~~~~~~~g~~~~y-VGHP 389 (607)
T PRK01021 318 DFPDFHFLLIKKLRKCGYKGKIIHYVCP-------SIWAWRPKRKTILEKYLDLLLLILPFEQGLFKNSPLRTVY-LGHP 389 (607)
T ss_pred CCCCCCHHHHHHHHHCCCCCCEEEEECC-------CEEEECCCHHHHHHHHHHHHEECCCCCHHHHHCCCCCCEE-ECCC
T ss_conf 8998788999999972899986899788-------3688662179999998867305267788999507998379-7896
Q ss_pred CCCCCCCCCCHHHHHHHHHHCCCCCEEE-CCCCCCCCCCCCCCC----CCCCCCCCCEEEEEEECCCCHHHHHHHHHHHH
Q ss_conf 1012344221256899998617986175-046553321000000----00001234124889705521147888776530
Q gi|254780402|r 212 KIDTESLPCDKELLSLYQESIAGRYTWA-AISTFEGEEDKAVYV----HNFIKCRTDVLTIIVPRHPRRCDAIERRLIAK 286 (440)
Q Consensus 212 K~d~~~~~~~~~~~~~~~~~~~~r~v~v-agSth~~EE~~il~a----~~~l~~~~~~~lIIvPRhpeR~~~i~~~l~~~ 286 (440)
T Consensus 390 l~e~i~~~~~~~~~r~-~l~~~~k~IIALLPGSR~SEI~RlLPI~~~ai~~~~l~~~~~~lV~~a~p~~~~~i~e~l~~~ 468 (607)
T PRK01021 390 LVETISNFQPCASWKE-QLLPSDKPIVAAFPGSRRGDILRNLTIQVQAFLASSLAQTHQLLVSSANPKYDHLILDVLQQE 468 (607)
T ss_pred CHHHCCCCCCCHHHHH-HCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHC
T ss_conf 0120223477456998-617788988999089978999987499999999872446764999568766889999999864
Q ss_pred CCHHHHHCCCCCCCCCCEEEEECCCCCCHHHHHHCCCEEEECCCCCCCCCCHHHHHHHCCCEEECCCCCCHHH-HHHHHH
Q ss_conf 0101100134444466416750676520255422082066135544454583768961994999898443799-999999
Q gi|254780402|r 287 GLKVARRSRGDVINAEVDIFLGDTIGEMGFYLRMTEIAFIGRSFCASGGQNPLEAAMLGCAILSGPNVENFRD-IYRRMV 365 (440)
Q Consensus 287 gl~~~~~S~~~~~~~~~~V~i~Dt~GeL~~lY~~AdiafVGGSl~~~GGhN~lEpaa~G~pVi~GP~~~nf~e-~~~~L~ 365 (440)
T Consensus 469 ~~~------------~~-~-II~~-~~kyeam~aSDaALaASG------TATLE~ALagvPmVVaYKlnpLTyfIAK~Lv 527 (607)
T PRK01021 469 GCL------------HS-K-IVPS-QFRYELMRECDCALAKCG------TIVLETALNQTPTIVTCQLRPFDTFLAKYIF 527 (607)
T ss_pred CCC------------CC-E-ECCC-HHHHHHHHHCCEEEECCC------HHHHHHHHHCCCEEEEEECCHHHHHHHHHHH
T ss_conf 898------------84-5-7173-258999985889988877------8999999838898999967827999999999
Q ss_pred HC-----C--------CE-------EEECCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH---CCCHHHHHHHHHHH
Q ss_conf 78-----9--------86-------995798999999999958989999999999999970---45569999999997
Q gi|254780402|r 366 SS-----G--------AV-------RIVEEVGTLADMVYSLLSEPTIRYEMINAAINEVKK---MQGPLKITLRSLDS 420 (440)
Q Consensus 366 ~~-----g--------~~-------~~v~d~~eL~~~l~~ll~d~~~~~~~~~~a~~~i~~---~~ga~~~~~~~i~~ 420 (440)
T Consensus 528 KI~lp~vsLPNILagr~VVPElI~gQ~D~~PE~iAaAl~-lL~~p~~~ekq~~~c~~~~~~~~~~~~~~~e~~~~~~~ 604 (607)
T PRK01021 528 KILLPAYSLPNIILGSVIFPEFIGGKKDFHPEEVAAALD-ILKTSQSKEKQKEACRDLYKAMTTSAITSKECLKRIFE 604 (607)
T ss_pred HHCCCCCCCCHHHCCCCCCCCCCCCCCCCCHHHHHHHHH-HHHCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
T ss_conf 725751211301169986666367766589899999999-87191567999999999999987178878999999986