HHsearch alignment for GI: 254780402 and conserved domain: PRK05749
>PRK05749 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed.
Probab=100.00 E-value=0 Score=885.56 Aligned_cols=418 Identities=40% Similarity=0.656 Sum_probs=405.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHCCC--C
Q ss_conf 99999999999999999999999974184400112454056777788887799981789999999999999986199--8
Q gi|254780402|r 8 ILLGIYRWGGIFFMPFLSVSLSLYRVFNRERGRKFGERLGYPTALRPIGPLIWFHASSVGETMALIGLIPAIRSRHV--N 85 (440)
Q Consensus 8 ~~~~lY~~~~~l~~p~~~~~~~~~~~~~k~~~~~~~eR~g~~~~~~~~~~~IW~HaaSvGE~~~a~pli~~l~~~~~--~ 85 (440)
T Consensus 1 m~~~lY~~l~~l~~p~~~~~~~~r~~~~~~~~~~~~eR~g~~~~~~~~~~~IW~HaaSvGE~~~~~pli~~l~~~~p~~~ 80 (423)
T PRK05749 1 MLRLLYTALLYLALPLALLRLLLRSRKAPEYRKRWGERFGLYKPPVPKGPLIWFHAVSVGETRAAIPLIRALRKRYPDLP 80 (423)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHCCCCE
T ss_conf 96999999999999999999999987497535428987589888788998599982879899999999999996299974
Q ss_pred EEEEECCCCCCHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHCCEEEEEECCCCHHHHHHHHHHCCCCEEEEEECCCCCC
Q ss_conf 99996277630012101477416885055720134455744202035640476214678887422455058641266542
Q gi|254780402|r 86 VLLTTMTATSAKVARKYLGQYAIHQYAPLDIQPAVSRFLKYWKPDCMILSESDIWPLTVFELSKQRIPQVLVNARMSRRS 165 (440)
Q Consensus 86 iliT~~T~tg~~~~~~~~~~~~~~~y~P~D~~~~~~~fl~~~~P~~~i~~e~ElWPnli~~~~~~~ip~~linarls~~S 165 (440)
T Consensus 81 ilvTt~T~sg~~~~~~~~~~~~~~~ylP~D~~~~~~rfl~~~~P~~~i~~E~EiWPnli~~~~~~~Ip~~liNaR~s~~S 160 (423)
T PRK05749 81 ILVTTMTPTGSERAKALFGDDVEHVYLPYDLPFAVRRFLRFWRPKLLIIMETELWPNLIAEAKKRGIPLVLANARLSERS 160 (423)
T ss_pred EEEEECCCHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHCCCCEEEECCCCCCHH
T ss_conf 99983783099999986689737999224787999999997398879986203108899999627886676525116336
Q ss_pred CCCCHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHCCC-CEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCEEECCCCC
Q ss_conf 12100111123310264423664157788899860885-05872043101234422125689999861798617504655
Q gi|254780402|r 166 FKNWKTVLSFSKKIFSQFSLVIVQSERYFRRYKELGAQ-KLIVSGNLKIDTESLPCDKELLSLYQESIAGRYTWAAISTF 244 (440)
Q Consensus 166 ~~~~~~~~~l~~~~~~~~~~i~~qs~~~~~rl~~lG~~-~i~v~GnlK~d~~~~~~~~~~~~~~~~~~~~r~v~vagSth 244 (440)
T Consensus 161 ~~~y~~~~~~~~~~l~~~~~i~~qs~~~~~r~~~lG~~~~v~v~GnlKfd~~~~~~~~~~~~~~~~~~~~~~v~vagSth 240 (423)
T PRK05749 161 FKRYAKFKRFYRLLFKNIDLVLAQSEEDAERFLALGAKNEVTVTGNLKFDIEIPPELAARAAALRRQLPNRPVWIAASTH 240 (423)
T ss_pred HHHHHHHHHHHHHHHHHCCEEEECCHHHHHHHHHCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECC
T ss_conf 76667669999999974276652699999999975999743876863224578711078899999981899689999288
Q ss_pred CCCCCCCCCCCCCC-CCCCCEEEEEEECCCCHHHHHHHHHHHHCCHHHHHCCCCCCCCCCEEEEECCCCCCHHHHHHCCC
Q ss_conf 33210000000000-12341248897055211478887765300101100134444466416750676520255422082
Q gi|254780402|r 245 EGEEDKAVYVHNFI-KCRTDVLTIIVPRHPRRCDAIERRLIAKGLKVARRSRGDVINAEVDIFLGDTIGEMGFYLRMTEI 323 (440)
Q Consensus 245 ~~EE~~il~a~~~l-~~~~~~~lIIvPRhpeR~~~i~~~l~~~gl~~~~~S~~~~~~~~~~V~i~Dt~GeL~~lY~~Adi 323 (440)
T Consensus 241 ~~EE~iil~~~~~l~~~~~~~~lIiaPRHpeR~~~i~~~l~~~gl~~~~~S~~~~~~~~~~Vli~Dt~GeL~~~Y~~a~i 320 (423)
T PRK05749 241 EGEEELVLDAHQALLKQFPNLLLILVPRHPERFKEVEELLKKAGLSYVRRSQGEAPSADTDVLLGDTMGELGLLYAIADI 320 (423)
T ss_pred HHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCEEEEECCCCHHHHHHHHCCE
T ss_conf 76999999999999740878289994787767999999999679977982799999988729998888758899985787
Q ss_pred EEEECCCCCCCCCCHHHHHHHCCCEEECCCCCCHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHCCHHHHHHHHHHHHHH
Q ss_conf 06613554445458376896199499989844379999999978986995798999999999958989999999999999
Q gi|254780402|r 324 AFIGRSFCASGGQNPLEAAMLGCAILSGPNVENFRDIYRRMVSSGAVRIVEEVGTLADMVYSLLSEPTIRYEMINAAINE 403 (440)
Q Consensus 324 afVGGSl~~~GGhN~lEpaa~G~pVi~GP~~~nf~e~~~~L~~~g~~~~v~d~~eL~~~l~~ll~d~~~~~~~~~~a~~~ 403 (440)
T Consensus 321 afvGGsf~~~GGHN~lEpa~~g~pvi~GP~~~nf~e~~~~L~~~g~~~~v~~~~eL~~~~~~ll~~~~~~~~~~~~a~~~ 400 (423)
T PRK05749 321 AFVGGSLVKIGGHNPLEPAAFGVPVISGPHTFNFKEIFERLLQAGAAIQVEDAEDLAKAVSSLLTDPDAREAMGEAGVAF 400 (423)
T ss_pred EEECCCCCCCCCCCHHHHHHCCCCEEECCCCCCHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHCCHHHHHHHHHHHHHH
T ss_conf 89827768889959799998399889993832779999999978995896899999999999976999999999999999
Q ss_pred HHHCCCHHHHHHHHHHHHHHHH
Q ss_conf 9704556999999999752378
Q gi|254780402|r 404 VKKMQGPLKITLRSLDSYVNPL 425 (440)
Q Consensus 404 i~~~~ga~~~~~~~i~~~l~~~ 425 (440)
T Consensus 401 v~~~~Gat~r~~~~i~~~L~~~ 422 (423)
T PRK05749 401 LKQNRGALQRTLQLLKPYLPPL 422 (423)
T ss_pred HHHCCCHHHHHHHHHHHHCCCC
T ss_conf 9978479999999999763578