HHsearch alignment for GI: 254780402 and conserved domain: TIGR00236
>TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase; InterPro: IPR003331 UDP-N-acetylglucosamine 2-epimerase 5.1.3.14 from EC catalyses the production of UDP-ManNAc from UDP-GlcNAc. Some of the enzymes is this family are bifunctional. In microorganisms the epimerase is involved in in the synthesis of the capsule precursor UDP-ManNAcA , . The protein from rat liver displays both epimerase and kinase activity .; GO: 0008761 UDP-N-acetylglucosamine 2-epimerase activity, 0006047 UDP-N-acetylglucosamine metabolic process, 0009103 lipopolysaccharide biosynthetic process.
Probab=97.24 E-value=0.0054 Score=39.35 Aligned_cols=330 Identities=18% Similarity=0.201 Sum_probs=187.1
Q ss_pred CHHHHHHHHHHHHHHHHC-CCCEEEEECCCCC-CHHHHCCCC-------CCEEEEECCC--------CCCHHHHHHHHHH
Q ss_conf 899999999999999861-9989999627763-001210147-------7416885055--------7201344557442
Q gi|254780402|r 65 SVGETMALIGLIPAIRSR-HVNVLLTTMTATS-AKVARKYLG-------QYAIHQYAPL--------DIQPAVSRFLKYW 127 (440)
Q Consensus 65 SvGE~~~a~pli~~l~~~-~~~iliT~~T~tg-~~~~~~~~~-------~~~~~~y~P~--------D~~~~~~~fl~~~ 127 (440)
T Consensus 9 ~~p~~~~~~p~~~~~~~~p~~~~~~~~~~~h~~~~~~~~~~~~~~~~~p~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~ 88 (380)
T TIGR00236 9 TRPEAIKLAPLIRALLKDPGIDWKVLHTGQHRDEEMLDQVLDLFSLPNPDYDLNIGSPGQTLGEITGGLLEGLEELLLEE 88 (380)
T ss_pred CCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHC
T ss_conf 76203566578999862688522567503200146789999886225754444235766304778888887678886414
Q ss_pred CCEEEEEECCCCHHHHHH--HHHHCCCCEEEEEECCCCCCCCCCHHHH-HHHHHCCCCC-CEEEECCHHHHHHHHHHCC-
Q ss_conf 020356404762146788--8742245505864126654212100111-1233102644-2366415778889986088-
Q gi|254780402|r 128 KPDCMILSESDIWPLTVF--ELSKQRIPQVLVNARMSRRSFKNWKTVL-SFSKKIFSQF-SLVIVQSERYFRRYKELGA- 202 (440)
Q Consensus 128 ~P~~~i~~e~ElWPnli~--~~~~~~ip~~linarls~~S~~~~~~~~-~l~~~~~~~~-~~i~~qs~~~~~rl~~lG~- 202 (440)
T Consensus 89 ~p~~~~~~-gd~~~~~~~~l~~~~~~~~~gh~~~gl--~~~~~~~p~p~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~ 165 (380)
T TIGR00236 89 KPDVVLVQ-GDTTTTLAGALAAFYLQIPVGHVEAGL--RTGDLYSPFPEELNRVLTGHIAKLHFAPTELAKENLLREGVE 165 (380)
T ss_pred CCCEEEEE-CCCHHHHHHHHHHHHHHCCHHHHHHCC--CCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCC
T ss_conf 88678971-662146777887776530101332011--124455776056777898877764203215667777630555
Q ss_pred -CCEEEECCCCCCCCCCCCCHH-HHHHHHHHCC-------CCCEEECCCCCCCCC-------CCCCCCC-CCCCCCCCEE
Q ss_conf -505872043101234422125-6899998617-------986175046553321-------0000000-0001234124
Q gi|254780402|r 203 -QKLIVSGNLKIDTESLPCDKE-LLSLYQESIA-------GRYTWAAISTFEGEE-------DKAVYVH-NFIKCRTDVL 265 (440)
Q Consensus 203 -~~i~v~GnlK~d~~~~~~~~~-~~~~~~~~~~-------~r~v~vagSth~~EE-------~~il~a~-~~l~~~~~~~ 265 (440)
T Consensus 166 ~~~~~~~g~~~~d~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~-~~~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 243 (380)
T TIGR00236 166 PGKIFVTGNTVIDALLTNLEIAEPSSPVLSEFGENYPFVPDDRV-LLLTLHRRENVGNPEPLENILEAILEILEEFPD-V 243 (380)
T ss_pred CCEEEEECHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCE-EEEEEHHHHCCCCHHHHHHHHHHHHHHHHHCCC-C
T ss_conf 45057622056777877665421015502342256773204544-465400110467601468999999998741243-0
Q ss_pred EEEEECCCCHHHHHHHHHHHHCCHHHHHCCCCCCCCCCEEEEECCCCCCHHHHHHCCCEEEECCCCCCCCCCHHHHHHHC
Q ss_conf 88970552114788877653001011001344444664167506765202554220820661355444545837689619
Q gi|254780402|r 266 TIIVPRHPRRCDAIERRLIAKGLKVARRSRGDVINAEVDIFLGDTIGEMGFYLRMTEIAFIGRSFCASGGQNPLEAAMLG 345 (440)
Q Consensus 266 lIIvPRhpeR~~~i~~~l~~~gl~~~~~S~~~~~~~~~~V~i~Dt~GeL~~lY~~AdiafVGGSl~~~GGhN~lEpaa~G 345 (440)
T Consensus 244 ~~~~p~h~~~~~~~~----~~~~-------~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~l---~d~gg~-~~~~~~~~ 308 (380)
T TIGR00236 244 AIVFPVHPNPKVREP----EFGL-------YKALGDAKRVFLIEPLGYLDFLLLLSNAYLIL---TDSGGL-QEEAPSLG 308 (380)
T ss_pred EEEEECCCCCCCCHH----HHHH-------HHHHCCCCCEEEECCHHHHHHHHHHHCCEEEE---ECCCCC-CHHHHHCC
T ss_conf 356621456421002----3104-------66632566357755134788888753241687---347763-00112127
Q ss_pred CCEEECCCCCCHHHHHHHHHHCCCEEEE-CCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
Q ss_conf 9499989844379999999978986995-79899999999995898999999999999997045569999999997
Q gi|254780402|r 346 CAILSGPNVENFRDIYRRMVSSGAVRIV-EEVGTLADMVYSLLSEPTIRYEMINAAINEVKKMQGPLKITLRSLDS 420 (440)
Q Consensus 346 ~pVi~GP~~~nf~e~~~~L~~~g~~~~v-~d~~eL~~~l~~ll~d~~~~~~~~~~a~~~i~~~~ga~~~~~~~i~~ 420 (440)
T Consensus 309 ~p~~~~~~~~~~p~----~~~~g~~~l~g~~~~~~~~~~~~~l~~p~~~~~~~~~~~p~-g-~g~~~~~~~~~~~~ 378 (380)
T TIGR00236 309 KPVLVLRDTTERPE----AVEAGTNKLVGTDKEKITKAAGRLLSDPDEYRKMSNAENPY-G-DGEASERIVEELLN 378 (380)
T ss_pred CCEEEEECCCCCCC----HHHCCCEEEECCCHHHHHHHHHHHHCCHHHHHHHHHHCCCC-C-CCHHHHHHHHHHHH
T ss_conf 74377503566642----01003200104667889999998731726788886412656-7-74146899999860