HHsearch alignment for GI: 254780402 and conserved domain: TIGR02149

>TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family; InterPro: IPR011875 This entry describes Corynebacterium glutamicum GlgA and closely related proteins in other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related IPR011835 from INTERPRO, family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor ..
Probab=99.48  E-value=8.7e-13  Score=103.64  Aligned_cols=293  Identities=18%  Similarity=0.198  Sum_probs=201.5

Q ss_pred             EEEECCCCCCHH-----HHHHHHHHCCEEEE--------EECCCCHHHHHH---HHHHCCCCEEEEEECCCCCCCCCCH-
Q ss_conf             688505572013-----44557442020356--------404762146788---8742245505864126654212100-
Q gi|254780402|r  108 IHQYAPLDIQPA-----VSRFLKYWKPDCMI--------LSESDIWPLTVF---ELSKQRIPQVLVNARMSRRSFKNWK-  170 (440)
Q Consensus       108 ~~~y~P~D~~~~-----~~~fl~~~~P~~~i--------~~e~ElWPnli~---~~~~~~ip~~linarls~~S~~~~~-  170 (440)
T Consensus        64 v~~Y~~~~~L~~GldPran~aL~tfSvDL~m~~d~~~~~vvHsHTWYa~LAG~LAk~Lyd~PlVvTaHSL--EPLRPWK~  141 (416)
T TIGR02149        64 VLGYRPWSELKEGLDPRANKALKTFSVDLAMANDVEDADVVHSHTWYAALAGHLAKLLYDVPLVVTAHSL--EPLRPWKK  141 (416)
T ss_pred             EEECCCCHHHCCCCCHHHHHHHCCHHHHHHHHHHHCCCCEEECHHHHHHHHHHHHHHHCCCCEEEEEECC--CCCCCCHH
T ss_conf             8740787432256772257540231157887611002715532078887899999996699839973037--88871317


Q ss_pred             --------HHHHHHHHCCCCCCEEEECCHHHHHHHHH----HCCCCEEEECC---CCCCCCCCCCCHHHHHHHHHHC-CC
Q ss_conf             --------11112331026442366415778889986----08850587204---3101234422125689999861-79
Q gi|254780402|r  171 --------TVLSFSKKIFSQFSLVIVQSERYFRRYKE----LGAQKLIVSGN---LKIDTESLPCDKELLSLYQESI-AG  234 (440)
Q Consensus       171 --------~~~~l~~~~~~~~~~i~~qs~~~~~rl~~----lG~~~i~v~Gn---lK~d~~~~~~~~~~~~~~~~~~-~~  234 (440)
T Consensus       142 EQLGgGY~lSsW~EktA~~aAd~vIAVS~amr~DiL~~YP~lD~~kv~Vv~NGId~~~y~~~~~~~~~~-v~~~~Gid~~  220 (416)
T TIGR02149       142 EQLGGGYKLSSWAEKTAIEAADRVIAVSGAMREDILKVYPDLDPEKVHVVYNGIDTKEYKPAADDDGNK-VLDRYGIDRS  220 (416)
T ss_pred             HHCCCCCCCCHHHHHHHHHHCCCEEEHHHHCHHHHHCCCCCCCCCCEEEEECCCCHHHHCCCCCCCHHH-HHHHHCCCCC
T ss_conf             565897420247888899850406531110335583158688846468886476457606888874113-4663267998


Q ss_pred             CCEEEC-C--CCCCCCCCCCCCCCCCCCCCCCEEEEE---EECCCCHHHHHHHHHHHHCCHHHHHCCCCCCCCCCEEEEE
Q ss_conf             861750-4--655332100000000001234124889---7055211478887765300101100134444466416750
Q gi|254780402|r  235 RYTWAA-I--STFEGEEDKAVYVHNFIKCRTDVLTII---VPRHPRRCDAIERRLIAKGLKVARRSRGDVINAEVDIFLG  308 (440)
Q Consensus       235 r~v~va-g--Sth~~EE~~il~a~~~l~~~~~~~lII---vPRhpeR~~~i~~~l~~~gl~~~~~S~~~~~~~~~~V~i~  308 (440)
T Consensus       221 rP~~lFVGRItRQKG-v~~L~~A~~~~~--~dvqvVLCAgapDTPEv~~Ev~~~~a~l~~-----------~R~gv~WI~  286 (416)
T TIGR02149       221 RPYVLFVGRITRQKG-VPHLLKAVHLIS--KDVQVVLCAGAPDTPEVAEEVRQAVAKLDR-----------EREGVIWIE  286 (416)
T ss_pred             CCEEEEEEEEECCCC-HHHHHHHHHHCC--CCCEEEEECCCCCCCCHHHHHHHHHHHHHH-----------CCCCEEECC
T ss_conf             887898520203165-589999996255--203598706767872068999999998876-----------169838635


Q ss_pred             C--CCCCCHHHHHHCCCEEEECCCC-CCCCCCHHHHHHHCCCEEECCCCCCHHHHHHHHHHCCCEEEECC----------
Q ss_conf             6--7652025542208206613554-44545837689619949998984437999999997898699579----------
Q gi|254780402|r  309 D--TIGEMGFYLRMTEIAFIGRSFC-ASGGQNPLEAAMLGCAILSGPNVENFRDIYRRMVSSGAVRIVEE----------  375 (440)
Q Consensus       309 D--t~GeL~~lY~~AdiafVGGSl~-~~GGhN~lEpaa~G~pVi~GP~~~nf~e~~~~L~~~g~~~~v~d----------  375 (440)
T Consensus       287 ~ml~~~~~~~L~~~A~-vFvCPSvYEPLGIvN-LEAMAC~tpVVA-S~~GGIpEVV~d-g~TG~LV~~~~lhdGtGtP~d  362 (416)
T TIGR02149       287 KMLPKEELVELLSNAE-VFVCPSVYEPLGIVN-LEAMACGTPVVA-SAVGGIPEVVVD-GETGFLVPIDDLHDGTGTPDD  362 (416)
T ss_pred             CCCCHHHHHHHHHCCC-EEECCCCCCCCCHHH-HHHHHCCCCEEE-CCCCCCCCEEEC-CCCCCCCCCCCCCCCCCCCCC
T ss_conf             6588789999984694-786484425420556-878850786344-036895526833-744312470145577888887


Q ss_pred             ----HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCC---HHHHHHHHHHHH
Q ss_conf             ----8999999999958989999999999999970455---699999999975
Q gi|254780402|r  376 ----VGTLADMVYSLLSEPTIRYEMINAAINEVKKMQG---PLKITLRSLDSY  421 (440)
Q Consensus       376 ----~~eL~~~l~~ll~d~~~~~~~~~~a~~~i~~~~g---a~~~~~~~i~~~  421 (440)
T Consensus       363 ~d~f~~~LA~ai~~ll~dp~~A~k~G~aGr~R~~~~FSW~~iA~kT~~~Y~~v  415 (416)
T TIGR02149       363 DDKFEADLAKAIDALLADPELAKKMGEAGRKRAVEEFSWESIAKKTVELYRKV  415 (416)
T ss_pred             CCHHHHHHHHHHHHHHCCHHHHHHHCHHHHHHHHHCCCHHHHHHHHHHHHHHC
T ss_conf             40568999999999742957898834434655421257578999999998741