HHsearch alignment for GI: 254780402 and conserved domain: TIGR02149
>TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family; InterPro: IPR011875 This entry describes Corynebacterium glutamicum GlgA and closely related proteins in other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related IPR011835 from INTERPRO, family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor ..
Probab=99.48 E-value=8.7e-13 Score=103.64 Aligned_cols=293 Identities=18% Similarity=0.198 Sum_probs=201.5
Q ss_pred EEEECCCCCCHH-----HHHHHHHHCCEEEE--------EECCCCHHHHHH---HHHHCCCCEEEEEECCCCCCCCCCH-
Q ss_conf 688505572013-----44557442020356--------404762146788---8742245505864126654212100-
Q gi|254780402|r 108 IHQYAPLDIQPA-----VSRFLKYWKPDCMI--------LSESDIWPLTVF---ELSKQRIPQVLVNARMSRRSFKNWK- 170 (440)
Q Consensus 108 ~~~y~P~D~~~~-----~~~fl~~~~P~~~i--------~~e~ElWPnli~---~~~~~~ip~~linarls~~S~~~~~- 170 (440)
T Consensus 64 v~~Y~~~~~L~~GldPran~aL~tfSvDL~m~~d~~~~~vvHsHTWYa~LAG~LAk~Lyd~PlVvTaHSL--EPLRPWK~ 141 (416)
T TIGR02149 64 VLGYRPWSELKEGLDPRANKALKTFSVDLAMANDVEDADVVHSHTWYAALAGHLAKLLYDVPLVVTAHSL--EPLRPWKK 141 (416)
T ss_pred EEECCCCHHHCCCCCHHHHHHHCCHHHHHHHHHHHCCCCEEECHHHHHHHHHHHHHHHCCCCEEEEEECC--CCCCCCHH
T ss_conf 8740787432256772257540231157887611002715532078887899999996699839973037--88871317
Q ss_pred --------HHHHHHHHCCCCCCEEEECCHHHHHHHHH----HCCCCEEEECC---CCCCCCCCCCCHHHHHHHHHHC-CC
Q ss_conf --------11112331026442366415778889986----08850587204---3101234422125689999861-79
Q gi|254780402|r 171 --------TVLSFSKKIFSQFSLVIVQSERYFRRYKE----LGAQKLIVSGN---LKIDTESLPCDKELLSLYQESI-AG 234 (440)
Q Consensus 171 --------~~~~l~~~~~~~~~~i~~qs~~~~~rl~~----lG~~~i~v~Gn---lK~d~~~~~~~~~~~~~~~~~~-~~ 234 (440)
T Consensus 142 EQLGgGY~lSsW~EktA~~aAd~vIAVS~amr~DiL~~YP~lD~~kv~Vv~NGId~~~y~~~~~~~~~~-v~~~~Gid~~ 220 (416)
T TIGR02149 142 EQLGGGYKLSSWAEKTAIEAADRVIAVSGAMREDILKVYPDLDPEKVHVVYNGIDTKEYKPAADDDGNK-VLDRYGIDRS 220 (416)
T ss_pred HHCCCCCCCCHHHHHHHHHHCCCEEEHHHHCHHHHHCCCCCCCCCCEEEEECCCCHHHHCCCCCCCHHH-HHHHHCCCCC
T ss_conf 565897420247888899850406531110335583158688846468886476457606888874113-4663267998
Q ss_pred CCEEEC-C--CCCCCCCCCCCCCCCCCCCCCCEEEEE---EECCCCHHHHHHHHHHHHCCHHHHHCCCCCCCCCCEEEEE
Q ss_conf 861750-4--655332100000000001234124889---7055211478887765300101100134444466416750
Q gi|254780402|r 235 RYTWAA-I--STFEGEEDKAVYVHNFIKCRTDVLTII---VPRHPRRCDAIERRLIAKGLKVARRSRGDVINAEVDIFLG 308 (440)
Q Consensus 235 r~v~va-g--Sth~~EE~~il~a~~~l~~~~~~~lII---vPRhpeR~~~i~~~l~~~gl~~~~~S~~~~~~~~~~V~i~ 308 (440)
T Consensus 221 rP~~lFVGRItRQKG-v~~L~~A~~~~~--~dvqvVLCAgapDTPEv~~Ev~~~~a~l~~-----------~R~gv~WI~ 286 (416)
T TIGR02149 221 RPYVLFVGRITRQKG-VPHLLKAVHLIS--KDVQVVLCAGAPDTPEVAEEVRQAVAKLDR-----------EREGVIWIE 286 (416)
T ss_pred CCEEEEEEEEECCCC-HHHHHHHHHHCC--CCCEEEEECCCCCCCCHHHHHHHHHHHHHH-----------CCCCEEECC
T ss_conf 887898520203165-589999996255--203598706767872068999999998876-----------169838635
Q ss_pred C--CCCCCHHHHHHCCCEEEECCCC-CCCCCCHHHHHHHCCCEEECCCCCCHHHHHHHHHHCCCEEEECC----------
Q ss_conf 6--7652025542208206613554-44545837689619949998984437999999997898699579----------
Q gi|254780402|r 309 D--TIGEMGFYLRMTEIAFIGRSFC-ASGGQNPLEAAMLGCAILSGPNVENFRDIYRRMVSSGAVRIVEE---------- 375 (440)
Q Consensus 309 D--t~GeL~~lY~~AdiafVGGSl~-~~GGhN~lEpaa~G~pVi~GP~~~nf~e~~~~L~~~g~~~~v~d---------- 375 (440)
T Consensus 287 ~ml~~~~~~~L~~~A~-vFvCPSvYEPLGIvN-LEAMAC~tpVVA-S~~GGIpEVV~d-g~TG~LV~~~~lhdGtGtP~d 362 (416)
T TIGR02149 287 KMLPKEELVELLSNAE-VFVCPSVYEPLGIVN-LEAMACGTPVVA-SAVGGIPEVVVD-GETGFLVPIDDLHDGTGTPDD 362 (416)
T ss_pred CCCCHHHHHHHHHCCC-EEECCCCCCCCCHHH-HHHHHCCCCEEE-CCCCCCCCEEEC-CCCCCCCCCCCCCCCCCCCCC
T ss_conf 6588789999984694-786484425420556-878850786344-036895526833-744312470145577888887
Q ss_pred ----HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCC---HHHHHHHHHHHH
Q ss_conf ----8999999999958989999999999999970455---699999999975
Q gi|254780402|r 376 ----VGTLADMVYSLLSEPTIRYEMINAAINEVKKMQG---PLKITLRSLDSY 421 (440)
Q Consensus 376 ----~~eL~~~l~~ll~d~~~~~~~~~~a~~~i~~~~g---a~~~~~~~i~~~ 421 (440)
T Consensus 363 ~d~f~~~LA~ai~~ll~dp~~A~k~G~aGr~R~~~~FSW~~iA~kT~~~Y~~v 415 (416)
T TIGR02149 363 DDKFEADLAKAIDALLADPELAKKMGEAGRKRAVEEFSWESIAKKTVELYRKV 415 (416)
T ss_pred CCHHHHHHHHHHHHHHCCHHHHHHHCHHHHHHHHHCCCHHHHHHHHHHHHHHC
T ss_conf 40568999999999742957898834434655421257578999999998741