HHsearch alignment for GI: 254780402 and conserved domain: cd03789
>cd03789 GT1_LPS_heptosyltransferase Lipopolysaccharide heptosyltransferase is involved in the biosynthesis of lipooligosaccharide (LOS). Lipopolysaccharide (LPS) is a major component of the outer membrane of gram-negative bacteria. LPS heptosyltransferase transfers heptose molecules from ADP-heptose to 3-deoxy-D-manno-octulosonic acid (KDO), a part of the inner core component of LPS. This family belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=95.42 E-value=0.23 Score=28.67 Aligned_cols=56 Identities=13% Similarity=0.118 Sum_probs=38.1
Q ss_pred EEEEECCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHCCCCCCEEEEECCCCC
Q ss_conf 9998178999999999999998619989999627763001210147741688505572
Q gi|254780402|r 59 IWFHASSVGETMALIGLIPAIRSRHVNVLLTTMTATSAKVARKYLGQYAIHQYAPLDI 116 (440)
Q Consensus 59 IW~HaaSvGE~~~a~pli~~l~~~~~~iliT~~T~tg~~~~~~~~~~~~~~~y~P~D~ 116 (440)
T Consensus 3 Lii~~~~iGD~i~~~p~i~~lk~~~P~~~I~~l~~~~~~~l~~~~p~id~v--i~~~~ 58 (279)
T cd03789 3 LVIRLSWIGDVVLATPLLRALKARYPDARITVLAPPWFAPLLELMPEVDRV--IVLPK 58 (279)
T ss_pred EEEECCCCHHHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHCCCCCEE--EEECC
T ss_conf 999478503999999999999998879989999893689999639985799--99535