HHsearch alignment for GI: 254780402 and conserved domain: cd03798
>cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases. wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS.
Probab=99.83 E-value=6.1e-18 Score=137.48 Aligned_cols=331 Identities=20% Similarity=0.170 Sum_probs=195.2
Q ss_pred HHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHCCCCCCEE-EEEC-CCC----------CCHH---HHHHH--HHHCC
Q ss_conf 999999999999986199899996277630012101477416-8850-557----------2013---44557--44202
Q gi|254780402|r 67 GETMALIGLIPAIRSRHVNVLLTTMTATSAKVARKYLGQYAI-HQYA-PLD----------IQPA---VSRFL--KYWKP 129 (440)
Q Consensus 67 GE~~~a~pli~~l~~~~~~iliT~~T~tg~~~~~~~~~~~~~-~~y~-P~D----------~~~~---~~~fl--~~~~P 129 (440)
T Consensus 15 G~e~~~~~la~~L~~~G~~V~Vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 94 (377)
T cd03798 15 GGGIFVKELARALAKRGVEVTVLAPGPWGPKLLDLLKGRLVGVERLPVLLPVVPLLKGPLLYLLAARALLKLLKLKRFRP 94 (377)
T ss_pred HHHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 49999999999999779969999537987531231257520003445455444331046677899999999999746998
Q ss_pred EEEEEECCCCHHHHH--HHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHCC--CCE
Q ss_conf 035640476214678--8874224550586412665421210011112331026442366415778889986088--505
Q gi|254780402|r 130 DCMILSESDIWPLTV--FELSKQRIPQVLVNARMSRRSFKNWKTVLSFSKKIFSQFSLVIVQSERYFRRYKELGA--QKL 205 (440)
Q Consensus 130 ~~~i~~e~ElWPnli--~~~~~~~ip~~linarls~~S~~~~~~~~~l~~~~~~~~~~i~~qs~~~~~rl~~lG~--~~i 205 (440)
T Consensus 95 DvI~~~-~~~~~~~~~~~~~~~~~~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~S~~~~~~~~~~~~~~~~i 173 (377)
T cd03798 95 DLIHAH-FAYPDGFAAALLKRKLGIPLVVTLHGSDVNLLPRKRLLRALLRRALRRADAVIAVSEALADELKALGIDPEKV 173 (377)
T ss_pred CEEEEC-CCCHHHHHHHHHHHHCCCCEEEEECCCHHHHCCCCHHHHHHHHHHHHHCCEEEECCHHHHHHHHHHCCCCCCE
T ss_conf 689978-8406799999999973998899967741431023168999999999858999988989999999858996559
Q ss_pred EEECCCCCCCCCCCCCHHHHHHHHHHCCCCCEEE-CCCCCCCC-CCCCCCCCCCC-CCCCCEEEEEEECCCCHHHHHHHH
Q ss_conf 8720431012344221256899998617986175-04655332-10000000000-123412488970552114788877
Q gi|254780402|r 206 IVSGNLKIDTESLPCDKELLSLYQESIAGRYTWA-AISTFEGE-EDKAVYVHNFI-KCRTDVLTIIVPRHPRRCDAIERR 282 (440)
Q Consensus 206 ~v~GnlK~d~~~~~~~~~~~~~~~~~~~~r~v~v-agSth~~E-E~~il~a~~~l-~~~~~~~lIIvPRhpeR~~~i~~~ 282 (440)
T Consensus 174 ~vi~ng-id~~~f~~~~~~~~~~~~~~~~~~~i~~~Grl~~~Kg~~~li~a~~~l~~~~~~~~l~i~G~g~~~-~~l~~~ 251 (377)
T cd03798 174 TVIPNG-VDTERFSPADRAEARKLGLPEDKKVILFVGRLVPRKGIDYLIEALARLLKKRPDVHLVIVGDGPLR-EALEAL 251 (377)
T ss_pred EEECCC-CCHHHCCCCCHHHHHHHCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCHHH-HHHHHH
T ss_conf 998897-578754988777898608999985999982452001828999999998874888522432682788-899999
Q ss_pred HHHHCCHHHHHCCCCCCCCCCEEEEECCC--CCCHHHHHHCCCEEEECCCCCCCCCCHHHHHHHCCCEEECCCCCCHHHH
Q ss_conf 65300101100134444466416750676--5202554220820661355444545837689619949998984437999
Q gi|254780402|r 283 LIAKGLKVARRSRGDVINAEVDIFLGDTI--GEMGFYLRMTEIAFIGRSFCASGGQNPLEAAMLGCAILSGPNVENFRDI 360 (440)
Q Consensus 283 l~~~gl~~~~~S~~~~~~~~~~V~i~Dt~--GeL~~lY~~AdiafVGGSl~~~GGhN~lEpaa~G~pVi~GP~~~nf~e~ 360 (440)
T Consensus 252 ~~~~~l~~-------------~v~~~g~v~~~~~~~~~~~adv-~v~pS~~E~~~~~~lEama~G~PvI~~~-~gg~~e~ 316 (377)
T cd03798 252 AAELGLED-------------RVTFLGAVPHEEVPAYYAAADV-FVLPSLREGFGLVLLEAMACGLPVVATD-VGGIPEI 316 (377)
T ss_pred HHHCCCCC-------------EEEECCCEEHHHCCCCCCCCCC-CCCCCHHHHHHHHHHHHHHCCCCEEECC-CCCHHHH
T ss_conf 88618873-------------6986052100101013333774-1378557651255899997599799958-9986998
Q ss_pred HHHHHHCCCEEEE--CCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
Q ss_conf 9999978986995--798999999999958989999999999999970455699999999975
Q gi|254780402|r 361 YRRMVSSGAVRIV--EEVGTLADMVYSLLSEPTIRYEMINAAINEVKKMQGPLKITLRSLDSY 421 (440)
Q Consensus 361 ~~~L~~~g~~~~v--~d~~eL~~~l~~ll~d~~~~~~~~~~a~~~i~~~~ga~~~~~~~i~~~ 421 (440)
T Consensus 317 i---~~~~~G~~~~~~~~~~l~~~i~~l~~~~~~--~~~~~~~~~~~~~fs-~~~~~~~~~~~ 373 (377)
T cd03798 317 I---TDGENGLLVPPGDPEALAEAILRLLADPWL--RLGRAARRRVAERFS-WENVAERLLEL 373 (377)
T ss_pred H---CCCCEEEEECCCCHHHHHHHHHHHHCCHHH--HHHHHHHHHHHHHCC-HHHHHHHHHHH
T ss_conf 5---179749997999999999999999879999--999999999998699-99999999999