HHsearch alignment for GI: 254780402 and conserved domain: cd03816
>cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases. The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and Dol-PP-Glc-NAc2, and participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. In humans ALG1 has been associated with the congenital disorders of glycosylation (CDG) designated as subtype CDG-Ik.
Probab=98.19 E-value=0.00015 Score=49.56 Aligned_cols=213 Identities=16% Similarity=0.113 Sum_probs=125.9
Q ss_pred HHHHHHHHCCC-CCCEEEECCHHHHHHHHHHCC--CCEEEECCCCCCCCCCCCCHHHHHHHHH----------------H
Q ss_conf 11112331026-442366415778889986088--5058720431012344221256899998----------------6
Q gi|254780402|r 171 TVLSFSKKIFS-QFSLVIVQSERYFRRYKELGA--QKLIVSGNLKIDTESLPCDKELLSLYQE----------------S 231 (440)
Q Consensus 171 ~~~~l~~~~~~-~~~~i~~qs~~~~~rl~~lG~--~~i~v~GnlK~d~~~~~~~~~~~~~~~~----------------~ 231 (440)
T Consensus 148 ~~~k~~E~~fgr~a~~~lcVT~AM~~~L~~~~~~~~~~~vlyDrP~~~F~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (415)
T cd03816 148 RLAKWYEKLFGRLADYNLCVTKAMKEDLQQFNNWKIRATVLYDRPPEQFRPLPLEEKHELFLKLAKTFLTRELRIGAVQL 227 (415)
T ss_pred HHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHCCCCCEEEEECCCHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCC
T ss_conf 99999998755036460540689999998602668887998228889759886789999997435542323346653113
Q ss_pred CCCCCEEECCCC-CCCCCCC--CCCCCCCC-------CCCCCEEEEEEECCCCHHHHHHHHHHHHCCHHHHHCCCCCCCC
Q ss_conf 179861750465-5332100--00000000-------1234124889705521147888776530010110013444446
Q gi|254780402|r 232 IAGRYTWAAIST-FEGEEDK--AVYVHNFI-------KCRTDVLTIIVPRHPRRCDAIERRLIAKGLKVARRSRGDVINA 301 (440)
Q Consensus 232 ~~~r~v~vagSt-h~~EE~~--il~a~~~l-------~~~~~~~lIIvPRhpeR~~~i~~~l~~~gl~~~~~S~~~~~~~ 301 (440)
T Consensus 228 ~~~r~~llVSSTSWTpDEDF~iLl~AL~~Yd~~~~~~~~~p~ll~iITGKGP~K~-~y~~~I~~~~l~~V~i~---t--- 300 (415)
T cd03816 228 SEERPALLVSSTSWTPDEDFGILLDALVAYEKSAATGPKLPKLLCIITGKGPLKE-KYLERIKELKLKKVTIR---T--- 300 (415)
T ss_pred CCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHH-HHHHHHHHCCCCCEEEE---E---
T ss_conf 5777338995167777655678999999997653214789987999968853089-99999986288821997---2---
Q ss_pred CCEEEEECCCCCCHHHHHHCCCEEEECCCCCC--CC---CCHHHHHHHCCCEEECCCCCCHHHHHHHHHHCC-CEEEECC
Q ss_conf 64167506765202554220820661355444--54---583768961994999898443799999999789-8699579
Q gi|254780402|r 302 EVDIFLGDTIGEMGFYLRMTEIAFIGRSFCAS--GG---QNPLEAAMLGCAILSGPNVENFRDIYRRMVSSG-AVRIVEE 375 (440)
Q Consensus 302 ~~~V~i~Dt~GeL~~lY~~AdiafVGGSl~~~--GG---hN~lEpaa~G~pVi~GP~~~nf~e~~~~L~~~g-~~~~v~d 375 (440)
T Consensus 301 -----~wL~~eDYP~lL~~ADL---GVsLHtSSSGlDLPMKVVDMfG~GlPV~A----~~f~~i-~ELVk~~~NG~~F~~ 367 (415)
T cd03816 301 -----PWLSAEDYPKLLASADL---GVSLHTSSSGLDLPMKVVDMFGCGLPVCA----LDFKCI-DELVKHGENGLVFGD 367 (415)
T ss_pred -----CCCCHHHHHHHHHCCCC---CEEECCCCCCCCCCHHHHHHCCCCCCEEE----ECCCCH-HHHHCCCCCCCEECC
T ss_conf -----57887889998741534---72421268766777021010268875798----337517-877226878766578
Q ss_pred HHHHHHHHHHHHCC---HHHHHHHHHHHHHH
Q ss_conf 89999999999589---89999999999999
Q gi|254780402|r 376 VGTLADMVYSLLSE---PTIRYEMINAAINE 403 (440)
Q Consensus 376 ~~eL~~~l~~ll~d---~~~~~~~~~~a~~~ 403 (440)
T Consensus 368 ~~eL~~~l~~l~~~~p~~~~l~~lk~~a~~~ 398 (415)
T cd03816 368 SEELAEQLIDLLSNFPNRGKLNSLKKGAQEE 398 (415)
T ss_pred HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
T ss_conf 9999999999985599668999999777774