HHsearch alignment for GI: 254780402 and conserved domain: cd03819
>cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases. WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core.
Probab=99.79 E-value=2.2e-16 Score=127.23 Aligned_cols=312 Identities=17% Similarity=0.163 Sum_probs=189.8
Q ss_pred HHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHCCCCCCEEEEECCCC------C---CHHHHHHHHHHCCEEEEEEC-
Q ss_conf 9999999999999861998999962776300121014774168850557------2---01344557442020356404-
Q gi|254780402|r 67 GETMALIGLIPAIRSRHVNVLLTTMTATSAKVARKYLGQYAIHQYAPLD------I---QPAVSRFLKYWKPDCMILSE- 136 (440)
Q Consensus 67 GE~~~a~pli~~l~~~~~~iliT~~T~tg~~~~~~~~~~~~~~~y~P~D------~---~~~~~~fl~~~~P~~~i~~e- 136 (440)
T Consensus 11 GaE~~~~~La~~L~~~Gh~V~vi~~--~~~~-~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~Divh~h~~ 87 (355)
T cd03819 11 GVERGTLELARALVERGHRSLVASA--GGRL-VAELEAEGSRHIKLPFISKNPLRILLNVARLRRLIREEKVDIVHARSR 87 (355)
T ss_pred HHHHHHHHHHHHHHHCCCEEEEEEC--CCCC-CHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCEEEECCC
T ss_conf 1799999999999987998999968--9987-155663496699917877882899999999999999969989997786
Q ss_pred CCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHCCCCCCEEEECCHHHHHHHHH-HCC--CCEEEECC-C-
Q ss_conf 762146788874224550586412665421210011112331026442366415778889986-088--50587204-3-
Q gi|254780402|r 137 SDIWPLTVFELSKQRIPQVLVNARMSRRSFKNWKTVLSFSKKIFSQFSLVIVQSERYFRRYKE-LGA--QKLIVSGN-L- 211 (440)
Q Consensus 137 ~ElWPnli~~~~~~~ip~~linarls~~S~~~~~~~~~l~~~~~~~~~~i~~qs~~~~~rl~~-lG~--~~i~v~Gn-l- 211 (440)
T Consensus 88 ~~~~~~~-~a~~~~~~~~i~t~H-----~~~---~~~~~~~~~~~~~~~~i~~S~~~~~~~~~~~~~~~~ki~vI~ngid 158 (355)
T cd03819 88 APAWSAY-LAARRTRPPFVTTVH-----GFY---SVNFRYNAIMARGDRVIAVSNFIADHIRENYGVDPDRIRVIPRGVD 158 (355)
T ss_pred CHHHHHH-HHHHHCCCCEEEEEC-----CCC---CHHHHHHHHHHHCCEEEEECHHHHHHHHHHHCCCHHHEEEECCCCC
T ss_conf 4499999-999853997899967-----877---4067999999727989994589999999973998789999788756
Q ss_pred --CCCCCCCCCCHHHHHHHHHH---CCCCCEEEC-CCCCC-CCCCCCCCCCCCC-CCCCCEEEEEEECCCCH---HHHHH
Q ss_conf --10123442212568999986---179861750-46553-3210000000000-12341248897055211---47888
Q gi|254780402|r 212 --KIDTESLPCDKELLSLYQES---IAGRYTWAA-ISTFE-GEEDKAVYVHNFI-KCRTDVLTIIVPRHPRR---CDAIE 280 (440)
Q Consensus 212 --K~d~~~~~~~~~~~~~~~~~---~~~r~v~va-gSth~-~EE~~il~a~~~l-~~~~~~~lIIvPRhpeR---~~~i~ 280 (440)
T Consensus 159 ~~~f~~~--~~~~~~~~~~~~~~~~~~~~~~i~~vGRl~~~Kg~~~li~a~~~l~~~~~~~~l~i~G~g~~~~~~~~~~~ 236 (355)
T cd03819 159 LDRFDPG--AVPPERILALAREWPLPKGKPVILLPGRLTRWKGQEVFIEALARLKKDDPDVHLLIVGDAQGRRFYYAELL 236 (355)
T ss_pred HHHCCCC--CCCHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHH
T ss_conf 5423877--78778899999862899998799996166544576999999999986489979999707864168999999
Q ss_pred HHHHHHCCHHHHHCCCCCCCCCCEEEEECCCCCCHHHHHHCCCEEEECCCC-CCCCCCHHHHHHHCCCEEECCCCCCHHH
Q ss_conf 776530010110013444446641675067652025542208206613554-4454583768961994999898443799
Q gi|254780402|r 281 RRLIAKGLKVARRSRGDVINAEVDIFLGDTIGEMGFYLRMTEIAFIGRSFC-ASGGQNPLEAAMLGCAILSGPNVENFRD 359 (440)
Q Consensus 281 ~~l~~~gl~~~~~S~~~~~~~~~~V~i~Dt~GeL~~lY~~AdiafVGGSl~-~~GGhN~lEpaa~G~pVi~GP~~~nf~e 359 (440)
T Consensus 237 ~~~~~~~l~~-------------~v~f~G~~~d~~~~~~~adi-~v~pS~~~Egf~~vllEAma~G~PvV~s~-~gg~~e 301 (355)
T cd03819 237 ELIKRLGLQD-------------RVTFVGHCSDMPAAYALADI-VVSASTEPEAFGRTAVEAQAMGRPVIASD-HGGARE 301 (355)
T ss_pred HHHHHCCCCC-------------CEEECCCCHHHHHHHHHHCC-CCCCCCCCCCCHHHHHHHHHCCCCEEEEC-CCCCHH
T ss_conf 9999819976-------------28865762146899874032-55887771000078999998699899908-999476
Q ss_pred HHHHHHHCCCEEEECCHHHHHHHHHHHHC-CHHHHHHHHHHHHHHHHHCC
Q ss_conf 99999978986995798999999999958-98999999999999997045
Q gi|254780402|r 360 IYRRMVSSGAVRIVEEVGTLADMVYSLLS-EPTIRYEMINAAINEVKKMQ 408 (440)
Q Consensus 360 ~~~~L~~~g~~~~v~d~~eL~~~l~~ll~-d~~~~~~~~~~a~~~i~~~~ 408 (440)
T Consensus 302 ii~~-~~~G~l~~~~d~~~l~~~i~~~l~~~~~~r~~~~~~ar~~~~~~f 350 (355)
T cd03819 302 TVRP-GETGLLVPPGDAEALAQALDQILSLLPEGRAKMFAKARMCVETLF 350 (355)
T ss_pred HCCC-CCCEEEECCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHC
T ss_conf 6158-997899889999999999999986999999999999999999848