HHsearch results for GI: 254780402 and protein with PDBid: 1psw_A

>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7
Probab=97.81  E-value=0.00019  Score=47.45  Aligned_cols=261  Identities=13%  Similarity=0.052  Sum_probs=116.5

Q ss_pred             EEEEECCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHCCCCCCEEEEECCCCCC-------HHHHHHHHHHCCEE
Q ss_conf             99981789999999999999986199899996277630012101477416885055720-------13445574420203
Q gi|254780402|r   59 IWFHASSVGETMALIGLIPAIRSRHVNVLLTTMTATSAKVARKYLGQYAIHQYAPLDIQ-------PAVSRFLKYWKPDC  131 (440)
Q Consensus        59 IW~HaaSvGE~~~a~pli~~l~~~~~~iliT~~T~tg~~~~~~~~~~~~~~~y~P~D~~-------~~~~~fl~~~~P~~  131 (440)
                      +=++-.++|.+..+.|+++.|++.+|+.-||..+....+.+-+..+..+.+..++.+..       ....+.++..+.|.
T Consensus         4 Lii~~~~iGD~i~~~p~i~~Lk~~~P~~~I~~l~~~~~~~l~~~~p~id~v~~~~~~~~~~~~~~~~~~~~~l~~~~~D~   83 (348)
T 1psw_A            4 LVIGPSWVGDMMMSQSLYRTLQARYPQAIIDVMAPAWCRPLLSRMPEVNEAIPMPLGHGALEIGERRKLGHSLREKRYDR   83 (348)
T ss_dssp             EEECCSSHHHHHHHHHHHHHHHHHSTTCEEEEEECGGGHHHHTTCTTEEEEEEC-------CHHHHHHHHHHTTTTTCSE
T ss_pred             EEECCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCE
T ss_conf             99918960999999999999998789998999988508999851998678999578533013789999999975416877


Q ss_pred             EEEECCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHCCCC--EEEEC
Q ss_conf             5640476214678887422455058641266542121001111233102644236641577888998608850--58720
Q gi|254780402|r  132 MILSESDIWPLTVFELSKQRIPQVLVNARMSRRSFKNWKTVLSFSKKIFSQFSLVIVQSERYFRRYKELGAQK--LIVSG  209 (440)
Q Consensus       132 ~i~~e~ElWPnli~~~~~~~ip~~linarls~~S~~~~~~~~~l~~~~~~~~~~i~~qs~~~~~rl~~lG~~~--i~v~G  209 (440)
                      ++-+...+...++...  .+++......     ...++..+.... .....      .......++..+....  .....
T Consensus        84 ~i~~~~~~~~~~~~~~--~~~~~~~~~~-----~~~~~~~~~~~~-~~~~~------~~~~~~~~~~~~~~~~~~~~~~~  149 (348)
T 1psw_A           84 AYVLPNSFKSALVPLF--AGIPHRTGWR-----GEMRYGLLNDVR-VLDKE------AWPLMVERYIALAYDKGIMRTAQ  149 (348)
T ss_dssp             EEECSCCSGGGHHHHH--TTCSEEEEEC-----TTTCTTTCTEEE-CCCTT------TCCSHHHHHHHTTSCGGGCSSGG
T ss_pred             EEECCCCCHHHHHHHH--HCCCCCCCCC-----CCCCCCCCCCCC-CCCCC------CCCHHHHHHHHHHHHHCCCCCCC
T ss_conf             6423543013677876--4165111323-----122323344433-34433------33147888898987640222222


Q ss_pred             CCCCCCCC--CCCCHHHHHHHHHH---CCCCCEEEC--CCCCCCC----CCCCCCCCCCCCCCCCEEEEEEE--CCCCHH
Q ss_conf             43101234--42212568999986---179861750--4655332----10000000000123412488970--552114
Q gi|254780402|r  210 NLKIDTES--LPCDKELLSLYQES---IAGRYTWAA--ISTFEGE----EDKAVYVHNFIKCRTDVLTIIVP--RHPRRC  276 (440)
Q Consensus       210 nlK~d~~~--~~~~~~~~~~~~~~---~~~r~v~va--gSth~~E----E~~il~a~~~l~~~~~~~lIIvP--RhpeR~  276 (440)
                      ++......  ...+..+.......   ..++++++.  ++++...    .+...+..+.+.+. +..+++++  -+-++.
T Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~k~wp~~~~~~l~~~l~~~-~~~ivl~~~~~e~~~~  228 (348)
T 1psw_A          150 DLPQPLLWPQLQVSEGEKSYTCNQFSLSSERPMIGFCPGAEFGPAKRWPHYHYAELAKQLIDE-GYQVVLFGSAKDHEAG  228 (348)
T ss_dssp             GSCSSCCCCCCCCCHHHHHHHHHHTTCCSSSCEEEEECCCTTCGGGSCCHHHHHHHHHHHHHT-TCEEEECCCGGGHHHH
T ss_pred             CCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEECCCCCHHHCCCCCHHHHHHHHHHHHHC-CCCEECCCCHHHHHHH
T ss_conf             455433576667898999999864124667874884587552113689689899999998753-9831205784679999


Q ss_pred             HHHHHHHHHHCCHHHHHCCCCCCCCCCEEEEE--CCCCCCHHHHHHCCCEEEECCCCCCCCCCHHHHHHHCCCEE--ECC
Q ss_conf             78887765300101100134444466416750--67652025542208206613554445458376896199499--989
Q gi|254780402|r  277 DAIERRLIAKGLKVARRSRGDVINAEVDIFLG--DTIGEMGFYLRMTEIAFIGRSFCASGGQNPLEAAMLGCAIL--SGP  352 (440)
Q Consensus       277 ~~i~~~l~~~gl~~~~~S~~~~~~~~~~V~i~--Dt~GeL~~lY~~AdiafVGGSl~~~GGhN~lEpaa~G~pVi--~GP  352 (440)
                      +++.+.+....             ....+-+.  .++.|+..+.+.||+ |||.   +.|  -.--|+++|+|++  +||
T Consensus       229 ~~~~~~~~~~~-------------~~~~~~l~g~~sl~el~~li~~a~l-~I~~---Dtg--~~HlAaalg~p~v~lfg~  289 (348)
T 1psw_A          229 NEILAALNTEQ-------------QAWCRNLAGETQLDQAVILIAACKA-IVTN---DSG--LMHVAAALNRPLVALYGP  289 (348)
T ss_dssp             HHHHTTSCHHH-------------HTTEEECTTTSCHHHHHHHHHTSSE-EEEE---SSH--HHHHHHHTTCCEEEEESS
T ss_pred             HHHHHHHHHHC-------------CCCCCCCCCCCCHHHHHHHHHCCCE-EECC---CCH--HHHHHHHCCCCEEEEECC
T ss_conf             99999853201-------------4543344576558999999951636-7527---975--999999809998999789


Q ss_pred             C
Q ss_conf             8
Q gi|254780402|r  353 N  353 (440)
Q Consensus       353 ~  353 (440)
                      .
T Consensus       290 ~  290 (348)
T 1psw_A          290 S  290 (348)
T ss_dssp             S
T ss_pred             C
T ss_conf             9