HHsearch results for GI: 254780402 and protein with PDBid: 2bfw_A

>2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen synthase two rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8
Probab=99.08  E-value=1.3e-09  Score=81.30  Aligned_cols=162  Identities=13%  Similarity=0.085  Sum_probs=104.5

Q ss_pred             HHHHHHH--CCCCCEEE-CCCC-CC-CCCCCCCCCCCCCCC---CCCEEEEEEECCCCHHHHHHHHHHH-HCCHHHHHCC
Q ss_conf             8999986--17986175-0465-53-321000000000012---3412488970552114788877653-0010110013
Q gi|254780402|r  225 LSLYQES--IAGRYTWA-AIST-FE-GEEDKAVYVHNFIKC---RTDVLTIIVPRHPRRCDAIERRLIA-KGLKVARRSR  295 (440)
Q Consensus       225 ~~~~~~~--~~~r~v~v-agSt-h~-~EE~~il~a~~~l~~---~~~~~lIIvPRhpeR~~~i~~~l~~-~gl~~~~~S~  295 (440)
                      ...+.+.  +.++++++ .|.. ++ .--+.+++|++.++.   .+++.++|+.+.+++.+...+.+.+ .+.       
T Consensus        24 ~~~~~~~~~~~~~~~il~vGrl~~~~Kg~~~li~a~~~l~~~~~~~~~~l~ivG~~~~~~~~~~~~~~~~~~~-------   96 (200)
T 2bfw_A           24 KKSLLSKFGMDEGVTFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQEMRFIIIGKGDPELEGWARSLEEKHGN-------   96 (200)
T ss_dssp             HHHHHHHTTCCSCEEEEEESCBCSSSSCHHHHHHHHHHHTTSGGGGGEEEEEECCBCHHHHHHHHHHHHHCTT-------
T ss_pred             HHHHHHHHCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHHHHCCC-------
T ss_conf             9999999498999789999178824169899999999888637799869999836978999999999986899-------


Q ss_pred             CCCCCCCCEEEEE--CCCCCCHHHHHHCCCEEEECCCCCCCCCCHHHHHHHCCCEEECCCCCCHHHHHHHHHHCCCEEEE
Q ss_conf             4444466416750--67652025542208206613554445458376896199499989844379999999978986995
Q gi|254780402|r  296 GDVINAEVDIFLG--DTIGEMGFYLRMTEIAFIGRSFCASGGQNPLEAAMLGCAILSGPNVENFRDIYRRMVSSGAVRIV  373 (440)
Q Consensus       296 ~~~~~~~~~V~i~--Dt~GeL~~lY~~AdiafVGGSl~~~GGhN~lEpaa~G~pVi~GP~~~nf~e~~~~L~~~g~~~~v  373 (440)
                              .+.+.  ...-++..+|+.||+ ||-.|..+..|..++||+++|+|||.... ....    ++++.+.+..+
T Consensus        97 --------~~~~~~~~~~~~~~~~~~~adi-~v~ps~~E~~~~~~~EAma~G~pvi~~~~-~g~~----e~i~~~~g~l~  162 (200)
T 2bfw_A           97 --------VKVITEMLSREFVRELYGSVDF-VIIPSYFEPFGLVALEAMCLGAIPIASAV-GGLR----DIITNETGILV  162 (200)
T ss_dssp             --------EEEECSCCCHHHHHHHHTTCSE-EEECCSCCSSCHHHHHHHHTTCEEEEESC-HHHH----HHCCTTTCEEE
T ss_pred             --------CEEEEEECCHHHHHHHHHCCCC-CEECCCCCCCCHHHHHHHHCCCCEEEECC-CCCC----EEEECCCEEEE
T ss_conf             --------3899830798999998750476-24056767898689999988984999649-9871----47858857997


Q ss_pred             --CCHHHHHHHHHHHHC-CHHHHHHHHHHHHHHHHHC
Q ss_conf             --798999999999958-9899999999999999704
Q gi|254780402|r  374 --EEVGTLADMVYSLLS-EPTIRYEMINAAINEVKKM  407 (440)
Q Consensus       374 --~d~~eL~~~l~~ll~-d~~~~~~~~~~a~~~i~~~  407 (440)
                        .|+++|++.+.++++ +++.+++|+++|++.+++.
T Consensus       163 ~~~~~~~la~~i~~~l~~~~~~~~~~~~~a~~~a~~f  199 (200)
T 2bfw_A          163 KAGDPGELANAILKALELSRSDLSKFRENCKKRAMSF  199 (200)
T ss_dssp             CTTCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHT
T ss_pred             CCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHC
T ss_conf             7999999999999999579999999999999999847