HHsearch results for GI: 254780402 and protein with PDBid: 3ot5_A
>3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes}
Probab=99.27 E-value=4.2e-10 Score=84.62 Aligned_cols=331 Identities=14% Similarity=0.187 Sum_probs=189.1
Q ss_pred EEEEEECCHHHHHHHHHHHHHHHHCCC--CE-EEEECCCCCCHHHH---CCCCCCEEEEECCC----CC--------CHH
Q ss_conf 799981789999999999999986199--89-99962776300121---01477416885055----72--------013
Q gi|254780402|r 58 LIWFHASSVGETMALIGLIPAIRSRHV--NV-LLTTMTATSAKVAR---KYLGQYAIHQYAPL----DI--------QPA 119 (440)
Q Consensus 58 ~IW~HaaSvGE~~~a~pli~~l~~~~~--~i-liT~~T~tg~~~~~---~~~~~~~~~~y~P~----D~--------~~~ 119 (440)
-|-+=...--|+--..|++++|+++.. ++ ++-|.. -+++.. +.+.-... ..+.+ +. -..
T Consensus 29 KIl~v~GTRpe~ikl~pli~~l~~~~~~~~~~li~TGq--H~d~~~~~~~~~~i~~d-~~l~i~~~~~~~~~~~~~~i~~ 105 (403)
T 3ot5_A 29 KVMSIFGTRPEAIKMAPLVLALEKEPETFESTVVITAQ--HREMLDQVLEIFDIKPD-IDLDIMKKGQTLAEITSRVMNG 105 (403)
T ss_dssp EEEEEECSHHHHHHHHHHHHHHHTCTTTEEEEEEECC-------CHHHHHHTTCCCS-EECCCCC-CCCHHHHHHHHHHH
T ss_pred EEEEEEECCHHHHHHHHHHHHHHHCCCCCCEEEEEECC--CHHHHHHHHHHCCCCCC-EEEECCCCCCCHHHHHHHHHHH
T ss_conf 59999973684999999999998388888879999079--97899999986199988-3343488999999999999999
Q ss_pred HHHHHHHHCCEEEEEECCCCHHHHH--HHHHHCCCCEEEEEECCCCCCCCCCHHHH-HHHHHCCCCC-CEEEECCHHHHH
Q ss_conf 4455744202035640476214678--88742245505864126654212100111-1233102644-236641577888
Q gi|254780402|r 120 VSRFLKYWKPDCMILSESDIWPLTV--FELSKQRIPQVLVNARMSRRSFKNWKTVL-SFSKKIFSQF-SLVIVQSERYFR 195 (440)
Q Consensus 120 ~~~fl~~~~P~~~i~~e~ElWPnli--~~~~~~~ip~~linarls~~S~~~~~~~~-~l~~~~~~~~-~~i~~qs~~~~~ 195 (440)
..+++...+||++++. +|-.--+- -.+..++||++-+-|-+ +|+..+.-++ -..|.+..++ +.-+|.++.+++
T Consensus 106 ~~~~~~~~kPD~vlV~-GDr~~~la~alaa~~~~Ipi~HiegG~--rs~~~~~~~peE~~R~~i~kls~~hf~~t~~~~~ 182 (403)
T 3ot5_A 106 INEVIAAENPDIVLVH-GDTTTSFAAGLATFYQQKMLGHVEAGL--RTWNKYSPFPEEMNRQLTGVMADIHFSPTKQAKE 182 (403)
T ss_dssp HHHHHHHHCCSEEEEE-TTCHHHHHHHHHHHHTTCEEEEESCCC--CCSCTTSSTTHHHHHHHHHHHCSEEEESSHHHHH
T ss_pred HHHHHHHHCCCEEEEE-CCCCHHHHHHHHHHHHCCCEEEEECCC--CCCCCCCCCCHHHHHHCCCCEEEEEEEECHHHHH
T ss_conf 9999997399999996-888048999999998199789996466--5677678980787641246300599850278776
Q ss_pred HHHHHCC--CCEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCEEECCCCCCCCCC-----CCCCCC-CCCCCCCCEEEE
Q ss_conf 9986088--50587204310123442212568999986179861750465533210-----000000-000123412488
Q gi|254780402|r 196 RYKELGA--QKLIVSGNLKIDTESLPCDKELLSLYQESIAGRYTWAAISTFEGEED-----KAVYVH-NFIKCRTDVLTI 267 (440)
Q Consensus 196 rl~~lG~--~~i~v~GnlK~d~~~~~~~~~~~~~~~~~~~~r~v~vagSth~~EE~-----~il~a~-~~l~~~~~~~lI 267 (440)
|+.+.|. ++|.++||+-+|.................+...+ ++....|+.|.. ..+.+. ..+...++ ..+
T Consensus 183 ~L~~~G~~~~~I~~vG~~~iD~l~~~~~~~~~~~~~~~~~~~~-~ilvt~Hr~en~~~~~~~~~~~~~~~~~~~~~-~~i 260 (403)
T 3ot5_A 183 NLLAEGKDPATIFVTGNTAIDALKTTVQKDYHHPILENLGDNR-LILMTAHRRENLGEPMQGMFEAVREIVESRED-TEL 260 (403)
T ss_dssp HHHHTTCCGGGEEECCCHHHHHHHHHSCTTCCCHHHHSCTTCE-EEEECCCCHHHHTTHHHHHHHHHHHHHHHCTT-EEE
T ss_pred HHHHCCCCCCEEEEECCCCHHHHHHHHHHHHCCHHHHHCCCCC-EEEEECCCCHHCCCHHHHHHHHHHHHHHHCCC-EEE
T ss_conf 8875289966089968850888998787755073545345685-79998565222036167888998888750572-489
Q ss_pred EEECCCCHHHHHHHHHHHHCCHHHHHCCCCCCCCCCEEEEECCCCCCHH--HHHHCCCEEEECCCCCCCCCCHHHHHHHC
Q ss_conf 9705521147888776530010110013444446641675067652025--54220820661355444545837689619
Q gi|254780402|r 268 IVPRHPRRCDAIERRLIAKGLKVARRSRGDVINAEVDIFLGDTIGEMGF--YLRMTEIAFIGRSFCASGGQNPLEAAMLG 345 (440)
Q Consensus 268 IvPRhpeR~~~i~~~l~~~gl~~~~~S~~~~~~~~~~V~i~Dt~GeL~~--lY~~AdiafVGGSl~~~GGhN~lEpaa~G 345 (440)
+.|.||... +....... ......+.+++.+|-... +.+.|+ ..+|-| .|| ..||+.+|
T Consensus 261 i~p~~~~~~--~~~~~~~~------------~~~~~ni~~i~~l~~~~fl~ll~~a~-~vIgdS---ss~--~~EA~~lg 320 (403)
T 3ot5_A 261 VYPMHLNPA--VREKAMAI------------LGGHERIHLIEPLDAIDFHNFLRKSY-LVFTDS---GGV--QEEAPGMG 320 (403)
T ss_dssp EEECCSCHH--HHHHHHHH------------HTTCTTEEEECCCCHHHHHHHHHHEE-EEEECC---HHH--HHHGGGTT
T ss_pred EEECCCCHH--HHHHHHHH------------HCCCCCCEECCCCCHHHHHHHHHHEE-EEEECC---CHH--HHHHHHHC
T ss_conf 995477502--21123333------------02564100037722888999986428-999667---027--77788609
Q ss_pred CCEEE-CCCCCCHHHHHHHHHHCCCEEEE-CCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Q ss_conf 94999-89844379999999978986995-79899999999995898999999999999997045569999999997523
Q gi|254780402|r 346 CAILS-GPNVENFRDIYRRMVSSGAVRIV-EEVGTLADMVYSLLSEPTIRYEMINAAINEVKKMQGPLKITLRSLDSYVN 423 (440)
Q Consensus 346 ~pVi~-GP~~~nf~e~~~~L~~~g~~~~v-~d~~eL~~~l~~ll~d~~~~~~~~~~a~~~i~~~~ga~~~~~~~i~~~l~ 423 (440)
+|+|. |..+.. ++ ..+.|....+ .+.+++.+.+.+.+.++....++.+. .+.. -...|++|+++.|+++++
T Consensus 321 ~P~Inir~~tER-qe----g~~~g~~ilv~~~~~~ii~~~~~~l~~~~~~~k~~~~-~npY-GdG~as~rIv~iL~~~~~ 393 (403)
T 3ot5_A 321 VPVLVLRDTTER-PE----GIEAGTLKLIGTNKENLIKEALDLLDNKESHDKMAQA-ANPY-GDGFAANRILAAIKSHFE 393 (403)
T ss_dssp CCEEECCSSCSC-HH----HHHHTSEEECCSCHHHHHHHHHHHHHCHHHHHHHHHS-CCTT-CCSCHHHHHHHHHHHHHT
T ss_pred CCEEEECCCCCC-HH----HHHCCEEEECCCCHHHHHHHHHHHHHCHHHHHHHCCC-CCCC-CCCHHHHHHHHHHHHHHC
T ss_conf 978980787768-73----6854815995899999999999998596877641237-8999-898699999999998618