RPS-BLAST 2.2.22 [Sep-27-2009] Database: mmdb70 33,805 sequences; 4,956,049 total letters Searching..................................................done Query= gi|254780403|ref|YP_003064816.1| hypothetical protein CLIBASIA_01440 [Candidatus Liberibacter asiaticus str. psy62] (80 letters) >3fho_A ATP-dependent RNA helicase DBP5; mRNA export, ATPase, translation termination, ATP-binding, cytoplasm, hydrolase, membrane; 2.80A {Schizosaccharomyces pombe} (A:1-326) Length = 326 Score = 27.1 bits (59), Expect = 0.87 Identities = 5/29 (17%), Positives = 13/29 (44%), Gaps = 2/29 (6%) Query: 9 QVLYL--VFGGELENITQKKMRNPDDIDV 35 Q++ F +E ++ N ++I + Sbjct: 293 QIVLFSATFSERVEKYAERFAPNANEIRL 321 >1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} (A:50-117,A:240-340) Length = 169 Score = 24.7 bits (54), Expect = 4.9 Identities = 10/57 (17%), Positives = 15/57 (26%), Gaps = 15/57 (26%) Query: 38 IFSSYSNAYDVWKEKSQQMVDNAL------------MRY--FVVDISRFPHYELGKE 80 + A + E + M AL R + ISR+ L Sbjct: 15 SLKNLGLADKILSE-ANDMSTIALYNPDENGHIRRTDRIPDTLPGISRYHQVVLHMI 70 Database: mmdb70 Posted date: Jun 20, 2010 3:12 AM Number of letters in database: 4,956,049 Number of sequences in database: 33,805 Lambda K H 0.319 0.138 0.397 Gapped Lambda K H 0.267 0.0499 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 33805 Number of Hits to DB: 647,461 Number of extensions: 23672 Number of successful extensions: 90 Number of sequences better than 10.0: 1 Number of HSP's gapped: 90 Number of HSP's successfully gapped: 5 Length of query: 80 Length of database: 4,956,049 Length adjustment: 44 Effective length of query: 36 Effective length of database: 3,468,629 Effective search space: 124870644 Effective search space used: 124870644 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 50 (23.6 bits)