HHsearch results for GI: 254780404 and protein with PDBid: 3lv0_A
>3lv0_A Extragenic suppressor protein SUHB; niaid, seattle structural genomics center for infectious disease, ssgcid, CAT scratch disease; 1.85A {Bartonella henselae} PDB: 3luz_A
Probab=100.00 E-value=0 Score=393.17 Aligned_cols=248 Identities=21% Similarity=0.295 Sum_probs=208.5
Q ss_pred HCCHHHHHHHHHHHHHHHHHHHHHCCC--CCCEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCC
Q ss_conf 110088999999999999999997188--420477258888204899999999999998415631454224556332466
Q gi|254780404|r 29 YEWKQDLDIVRSAVQGASTVAMQYFLR--SPNVWWKHEGSSPVCDADIAVNDYLESFLRPLRPAYGWLSEETDDDLQRLN 106 (286)
Q Consensus 29 ~~~~~~l~~a~~aa~~Ag~~~~~~f~~--~~~~~~k~~~~~~VT~aD~~~e~~i~~~L~~~~P~~~iigEE~~~~~~~~~ 106 (286)
++.+++|++++++|++||+.++++|++ ..+++.|. ++|+||++|+++|++|.+.|++.||++.|++||+.... ..+
T Consensus 5 m~~~~~l~va~~aa~~Ag~~~l~~f~~~~~l~~~~K~-~~d~VT~aD~~~e~~i~~~L~~~~p~~~i~~EE~~~~~-~~~ 82 (267)
T 3lv0_A 5 MPQSAVMNVMVQAAMKAGRSLVRDYGEVQNLQVSLKG-PADYVSQADRKAEKIIFNELSKARPKFGFLMEESEEII-GED 82 (267)
T ss_dssp ---CHHHHHHHHHHHHHHHHHHHHHTTGGGSCEEEEE-TTEEEEHHHHHHHHHHHHHHHHHCTTSEEEETTSCCBC-CSS
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHCCHHHCEEEECC-CCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCC-CCC
T ss_conf 9742899999999999999999984712304563459-99866599999999999999972997648876402345-889
Q ss_pred CEEEEEEEECCCCHHHHHCCCCHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCEEEEEE
Q ss_conf 30356763213402221002210235554301221021100022333221222331001788633345787650799984
Q gi|254780404|r 107 YETLFVVDPIDGTRAFIEGRNEWCISVAVVHHGRPVIGVVHASALGKEFFVSVGMKSTCNGKNISVSSNQMSDSLAIMAS 186 (286)
Q Consensus 107 ~~~~WiIDPIDGT~nF~~g~p~f~vsIal~~~g~pv~gvi~~P~~~~~~~a~~g~ga~~n~~~i~~~~~~~~~~~~~~~~ 186 (286)
++++|+|||||||.||++|.|.|||+|||+++|+|++|+||+|.++++|+|.+|.|+|+|+++++++.........+..+
T Consensus 83 ~~~~WiIDPIDGT~nf~~g~p~~~vsial~~~g~pv~gvI~~P~~~~~~~a~~g~Ga~~n~~~~~~~~~~~~~~~~~~~~ 162 (267)
T 3lv0_A 83 SQHRFIVDPLDGTTNFLHGIPFFAVSIALESQGKIVAGVIYNPINDELFTAERGSGAFFNDRRCRVSARRRLEDCVIATG 162 (267)
T ss_dssp TTEEEEEEEEECHHHHHTTCSCCEEEEEEEETTEEEEEEEEETTTTEEEEEETTTEEEETTEECCCCCCCSGGGCEEEEC
T ss_pred CCCEEEEECCCCHHHHHCCCCCEEEEEEEEECCEEEEEEECCCCCCCEEEEECCCCCEECCCCCCCCCCCCHHHHEEECC
T ss_conf 87789995445867876599864788888899989999982477898899867976446585321244433233125314
Q ss_pred CCCCCC--H--------HHHHHHCCEEEECHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHCCEEEECCCCCCC
Q ss_conf 466431--0--------123654370130525578898621223699852799987821679999868909995899841
Q gi|254780404|r 187 DVSLKG--L--------DSYVRFRRQSSISSLCLRILMIASGEVDVLIVDRNANDWDLAAADLLLECSGGALVDIDRKLL 256 (286)
Q Consensus 187 ~~~~~~--~--------~~~~~~~~~~~~gs~~~~~~~vA~G~~d~~~~~~~~~~WD~aAg~~i~~eAGG~vtdl~G~~~ 256 (286)
...... . ....+...+|++||+++++|++|+|++|+|+. .+.++||+|||.+|++||||.++|++|+|+
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~ir~~gs~~~~~~~va~G~~d~~~~-~~~~~WD~aAg~~i~~eAGG~v~d~~G~~~ 241 (267)
T 3lv0_A 163 MPHLGRPGHGTYLIELRNVMAEVSGIRRFGTAALDLAYVAAGRTDGFWE-DNLQIWDMAAGILMVREAGGFVTDKEGGND 241 (267)
T ss_dssp CCCC--CCHHHHHHHHHHHHTTCSEEEBCSCSHHHHHHHHTTSSSEEEE-SSCCHHHHHHHHHHHHHTTCEEECTTSSSC
T ss_pred CCCCCCCCHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHCCCCCCCCC-CCCCHHHHHHHHHHHHHCCCEEECCCCCCC
T ss_conf 5544662102568999876655265776378999899986598652256-899899999999999978998987899967
Q ss_pred CCCCCCCCCCEEEECCHHHHHHHHHHHH
Q ss_conf 1677555588899874897999999751
Q gi|254780404|r 257 TYNRSQVNHEVLFASAKWHFPSFKQHLS 284 (286)
Q Consensus 257 ~~~~~~~~~~~l~a~~~~~~~~l~~~~~ 284 (286)
.|++. . ++|++...++.|.+.|.
T Consensus 242 ~~~~~----~-iia~n~~i~~~l~~~l~ 264 (267)
T 3lv0_A 242 IFRKK----N-IIAGNEHIRIKLERALK 264 (267)
T ss_dssp HHHHT----C-EEEECHHHHHHHHHHHH
T ss_pred CCCCC----E-EEEECHHHHHHHHHHHH
T ss_conf 68999----9-99989999999999987