RPSBLAST alignment of GI: 254780404 and MMDB domain: 1vdw_A_
>1vdw_A (A:) Hypothetical protein PH1897; homodimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; 1.30A {Pyrococcus horikoshii}Length = 254
Score = 111 bits (279), Expect = 7e-26
Identities = 48/245 (19%), Positives = 87/245 (35%), Gaps = 10/245 (4%)
Query: 31 WKQDLDIVRSAVQGASTVAMQYF--LRSPNVWWKHEGSSPVCDADIAVNDYLESFLRPLR 88
K I ++ M F ++ D + + S +
Sbjct: 3 VKTWRKIAIDIIRDFDHNIMPLFGNPKASETISISPSGDETKVVDKVAENIIISKFK--D 60
Query: 89 PAYGWLSEETDDDLQRLNYETLFVVDPIDGTRAFIEGRNEWCISVAVVHHGRPVIGVVHA 148
+SEE + VVDP+DG+ FI G + +SVA+ H P+ ++
Sbjct: 61 LGVNVVSEE--IGRIDQGSDYTVVVDPLDGSYNFINGIPFFAVSVAIFHEKDPIYAFIYE 118
Query: 149 SALGKEFFVSVGMKSTCNGKNISVSSNQMSDSLAIMASDVSLKGLDSYVRFRRQSSISSL 208
+ + + G S NG+ I V S++ K +D R R +I
Sbjct: 119 PIVERLYEGIPGKGSYLNGEKIKVRELAEKPSISFYTKGKGTKIIDKVKRTRTLGAI--- 175
Query: 209 CLRILMIASGEVDV-LIVDRNANDWDLAAADLLLECSGGALVDIDRKLLTYNRSQVNHEV 267
L + +A G +D + + D+AA ++ +G + D+D K + S
Sbjct: 176 ALELAYLARGALDAVVDIRNYLRPTDIAAGVVIAREAGAIVKDLDGKDVEITFSATEKVN 235
Query: 268 LFASA 272
+ A+
Sbjct: 236 IIAAN 240