RPS-BLAST 2.2.22 [Sep-27-2009]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= gi|254780404|ref|YP_003064817.1| inositol monophosphatase
family protein [Candidatus Liberibacter asiaticus str. psy62]
(286 letters)
>d2hhma_ e.7.1.1 (A:) Inositol monophosphatase {Human (Homo sapiens)
[TaxId: 9606]}
Length = 272
Score = 90.9 bits (224), Expect = 1e-19
Identities = 51/267 (19%), Positives = 106/267 (39%), Gaps = 19/267 (7%)
Query: 31 WKQDLDIVRSAVQGASTVAMQYFLRSPNVWWKHEGSSPVCDADIAVNDYLESFLRPLRPA 90
W++ +D + + A V + NV K V D V L S ++ P+
Sbjct: 1 WQECMDYAVTLARQAGEVVCEAIKNEMNVMLKSSPVDLVTATDQKVEKMLISSIKEKYPS 60
Query: 91 YGWLSEETDDDLQR--LNYETLFVVDPIDGTRAFIEGRNEWCISVAVVHHGRPVIGVVHA 148
+ ++ EE+ ++ L +++DPIDGT F+ +S+ + + GVV++
Sbjct: 61 HSFIGEESVAAGEKSILTDNPTWIIDPIDGTTNFVHRFPFVAVSIGFAVNKKIEFGVVYS 120
Query: 149 SALGKEFFVSVGMKSTCNGKNISVSSN------------QMSDSLAIMASDVSLKGLDSY 196
GK + G + CNG+ + VS S + + +S
Sbjct: 121 CVEGKMYTARKGKGAFCNGQKLQVSQQEDITKSLLVTELGSSRTPETVRMVLSNMEKLFC 180
Query: 197 VRFRRQSSISSLCLRILMIASGEVDVLIVDRNANDWDLAAADLLLECSGGALVDIDRKLL 256
+ S+ + + + ++A+G D + + WD+A A +++ +GG L+D+
Sbjct: 181 IPVHGIRSVGTAAVNMCLVATGGADA-YYEMGIHCWDVAGAGIIVTEAGGVLMDVTGGPF 239
Query: 257 TYNRSQVNHEVLFASAKWHFPSFKQHL 283
+ V+ A+ + + +
Sbjct: 240 DLM----SRRVIAANNRILAERIAKEI 262
>d1inpa_ e.7.1.1 (A:) Inositol polyphosphate 1-phosphatase {Cow (Bos
taurus), brain [TaxId: 9913]}
Length = 400
Score = 86.6 bits (213), Expect = 2e-18
Identities = 35/203 (17%), Positives = 67/203 (33%), Gaps = 45/203 (22%)
Query: 111 FVVDPIDGTRAFIEGRNEWC----------------ISVAVVHHGRPVIGVVHASALGKE 154
VDPID T +I+G + I V + G P++GV++ + ++
Sbjct: 150 IWVDPIDSTYQYIKGSADITPNQGIFPSGLQCVTVLIGVYDIQTGVPLMGVINQPFVSQD 209
Query: 155 FFVSV----------GMKSTCNGKNISVSSNQMSDSLAIMASDVSLKGLDSYVRFRRQSS 204
+ + + VS+ S++ + + S +G + S
Sbjct: 210 LHTRRWKGQCYWGLSYLGTNIHSLLPPVSTRSNSEAQSQGTQNPSSEGSCRFSVVISTSE 269
Query: 205 ------------------ISSLCLRILMIASGEVDVLI-VDRNANDWDLAAADLLLECSG 245
+ + L + G D+ I + WD AA +L G
Sbjct: 270 KETIKGALSHVCGERIFRAAGAGYKSLCVILGLADIYIFSEDTTFKWDSCAAHAILRAMG 329
Query: 246 GALVDIDRKLLTYNRSQVNHEVL 268
G +VD+ L + ++ L
Sbjct: 330 GGMVDLKECLERNPDTGLDLPQL 352
Score = 35.7 bits (81), Expect = 0.005
Identities = 13/88 (14%), Positives = 30/88 (34%), Gaps = 2/88 (2%)
Query: 36 DIVRSAVQGASTVAMQYFLRSPNVWWKHEGSSPVCDADIAVNDYLESFLRPLRPAYGW-- 93
+I R+ Q + + + K AD+ V + ++ + P G
Sbjct: 17 NIARACRQQETLFQLLIEEKKEGEKNKKFAVDFKTLADVLVQEVIKENMENKFPGLGKKI 76
Query: 94 LSEETDDDLQRLNYETLFVVDPIDGTRA 121
EE+++ L + + + P +
Sbjct: 77 FGEESNELTNDLGEKIIMRLGPTEEETV 104
>d1jp4a_ e.7.1.1 (A:) PIPase {Rat (Rattus norvegicus) [TaxId:
10116]}
Length = 304
Score = 86.3 bits (212), Expect = 2e-18
Identities = 41/280 (14%), Positives = 88/280 (31%), Gaps = 39/280 (13%)
Query: 35 LDIVRSAVQGASTVAMQYFLR-SPNVWWKHEGSSPVCDADIAVNDYLESFLRPLRPAYGW 93
+ S Q A T+ + K + AD V + S L P
Sbjct: 8 VASAYSIAQKAGTIVRCVIAEGDLGIVQKTSATDLQTKADRMVQMSICSSLSRKFPKLTI 67
Query: 94 LSEETDDDLQ-------------------------RLNYETLFVVDPIDGTRAFIEGRNE 128
+ EE + + + VDP+DGT+ + EG +
Sbjct: 68 IGEEDLPPGEVDQELIEDGQSEEILKQPCPSQYSAIKEEDLVVWVDPVDGTKEYTEGLLD 127
Query: 129 -WCISVAVVHHGRPVIGVVHASALGKEFFVSVGMKSTCNGKNI---------SVSSNQMS 178
+ + + + G+ + G+++ + + T G + +
Sbjct: 128 NVTVLIGIAYEGKAIAGIINQPYYNYQAGPDAVLGRTIWGVLGLGAFGFQLKEAPAGKHI 187
Query: 179 DSLAIMASDVSLKGLDSYVRFRRQSSISSLCLRILMIASGEVDVLI-VDRNANDWDLAAA 237
+ S+ + + + + +I+ + G+ + WD A
Sbjct: 188 ITTTRSHSNKLVTDCIAAMNPDNVLRVGGAGNKIIQLIEGKASAYVFASPGCKKWDTCAP 247
Query: 238 DLLLECSGGALVDIDRKLLTYNR--SQVNHEVLFASAKWH 275
+++L GG L DI L Y++ +N + A+ + +
Sbjct: 248 EVILHAVGGKLTDIHGNPLQYDKEVKHMNSAGVLAALRNY 287
>d1ka1a_ e.7.1.1 (A:) 3';5'-adenosine bisphosphatase, PAP
phosphatase {Baker's yeast (Saccharomyces cerevisiae)
[TaxId: 4932]}
Length = 354
Score = 79.0 bits (193), Expect = 4e-16
Identities = 45/335 (13%), Positives = 99/335 (29%), Gaps = 96/335 (28%)
Query: 32 KQDLDIVRSAVQGASTVAMQYF-----LRSPNVWWKHEGSSPVCDADIAVNDYLESFLRP 86
+++L + AV+ AS + + + K++ S PV D A + + ++
Sbjct: 3 ERELLVATQAVRKASLLTKRIQSEVISHKDSTTITKNDNS-PVTTGDYAAQTIIINAIKS 61
Query: 87 LRPAYGWLSEETDDDLQRLNYETL------------------------------------ 110
P + EE+ L +
Sbjct: 62 NFPDDKVVGEESSSGLSDAFVSGILNEIKANDEVYNKNYKKDDFLFTNDQFPLKSLEDVR 121
Query: 111 ----------------FVVDPIDGTRAFIEGRNEWCISVAVVHHGRPVIGVVHASALGKE 154
+ +DPIDGT+ F+ ++ + +A++ G +G + L
Sbjct: 122 QIIDFGNYEGGRKGRFWCLDPIDGTKGFLR-GEQFAVCLALIVDGVVQLGCIGCPNLVLS 180
Query: 155 FFVSVGMKST-----------------------CNGKNISVSSNQMSDSLAIMASDVSLK 191
+ + +K + I V + + + +
Sbjct: 181 SYGAQDLKGHESFGYIFRAVRGLGAFYSPSSDAESWTKIHVRHLKDTKDMITLEGVEKGH 240
Query: 192 GLDSYVRFRRQSSISSLCLRI------LMIASGEVDVLI-----VDRNANDWDLAAADLL 240
+ S L + ++A G DV + + WD AA +++
Sbjct: 241 SSHDEQTAIKNKLNISKSLHLDSQAKYCLLALGLADVYLRLPIKLSYQEKIWDHAAGNVI 300
Query: 241 LECSGGALVD-IDRKLLTYNRSQV--NHEVLFASA 272
+ +GG D ++ L + + V+ +S
Sbjct: 301 VHEAGGIHTDAMEDVPLDFGNGRTLATKGVIASSG 335
>d1lbva_ e.7.1.1 (A:) Archaeal inositol
monophosphatase/fructose-1,6-bisphosphatase {Archaeon
Archaeoglobus fulgidus [TaxId: 2234]}
Length = 252
Score = 62.4 bits (150), Expect = 5e-11
Identities = 35/242 (14%), Positives = 70/242 (28%), Gaps = 12/242 (4%)
Query: 36 DIVRSAVQGASTVA-----MQYFLRSPNVWWKHEGSSPVCDADIAVNDYLESFLRPLRPA 90
D +R + + A V M R +V +G+ P AD D LR R
Sbjct: 5 DALRISREIAGEVRKAIASMPLRERVKDVGMGKDGT-PTKAADRVAEDAALEILRKERVT 63
Query: 91 YGWLSEETDDDLQRLNYETLFVVDPIDGTRAFIEGRNEWCISVAVVHHGRPVIGVVHASA 150
+ +DP+DGT G + +S+ + +
Sbjct: 64 VVTEESGVLG-----EGDVFVALDPLDGTFNATRGIPVYSVSLCFSYSDKLKDAFFGYVY 118
Query: 151 LGKEFFVSVGMKSTCNGKNISVSSNQMSDSLAIMASDVSLKGLDSYVRFRRQSSISSLCL 210
S + + + + + R R S ++
Sbjct: 119 NLATGDEYYADSSGAYRNGERIEVSDAEELYCNAIIYYPDRKFP-FKRMRIFGSAATELC 177
Query: 211 RILMIASGEVDVLIVDRNANDWDLAAADLLLECSGGALVDIDRKLLTYNRSQVNHEVLFA 270
+ + + +D AA + E +GG + ++D + L + + +
Sbjct: 178 FFADGSFDCFLDIRPGKMLRIYDAAAGVFIAEKAGGKVTELDGESLGNKKFDMQERLNIV 237
Query: 271 SA 272
+A
Sbjct: 238 AA 239
>d1g0ha_ e.7.1.1 (A:) Archaeal inositol
monophosphatase/fructose-1,6-bisphosphatase {Archaeon
Methanococcus jannaschii [TaxId: 2190]}
Length = 252
Score = 58.6 bits (140), Expect = 6e-10
Identities = 41/246 (16%), Positives = 87/246 (35%), Gaps = 10/246 (4%)
Query: 30 EWKQDLDIVRSAVQGASTVAMQYFLRSPNVWWKHEGS--SPVCDADIAVNDYLESFLRPL 87
+W + I ++ + + YF R + D D +L+ L
Sbjct: 2 KWDE---IGKNIAKEIEKEILPYFGRKDKSYVVGTSPSGDETEIFDKISEDIALKYLKSL 58
Query: 88 RPAYGWLSEETDDDLQRLNYETLFVVDPIDGTRAFIEGRNEWCISVAVVHHGRPVIGVVH 147
+SEE + E V+DPIDG+ FI G + V + P G+ +
Sbjct: 59 NV--NIVSEELGV--IDNSSEWTVVIDPIDGSFNFINGIPFFAFCFGVFKNNEPYYGLTY 114
Query: 148 ASALGKEFFVSVGMKSTCNGKNISVSSNQMSDSLAIMASDVSLKGLDSYVRFRRQSSISS 207
+ G + NG+ I V ++ + + + +R +
Sbjct: 115 EFLTKSFYEAYKGKGAYLNGRKIKVKDFNPNNIVISYYPSKKIDLEKLRNKVKRVRIFGA 174
Query: 208 LCLRILMIASGEVDVLIVDR-NANDWDLAAADLLLECSGGALVDIDRKLLTYNRSQVNHE 266
L + +A G +D + R D+A++ ++ + +G + D + L ++ + +
Sbjct: 175 FGLEMCYVAKGTLDAVFDVRPKVRAVDIASSYIICKEAGALITDENGDELKFDLNATDRL 234
Query: 267 VLFASA 272
+ +
Sbjct: 235 NIIVAN 240
>d1vdwa_ e.7.1.1 (A:) Archaeal inositol
monophosphatase/fructose-1,6-bisphosphatase {Archaeon
Pyrococcus horikoshii [TaxId: 53953]}
Length = 253
Score = 56.2 bits (134), Expect = 3e-09
Identities = 50/241 (20%), Positives = 91/241 (37%), Gaps = 10/241 (4%)
Query: 35 LDIVRSAVQGASTVAMQYF--LRSPNVWWKHEGSSPVCDADIAVNDYLESFLRPLRPAYG 92
I ++ M F ++ D + + S + L
Sbjct: 6 RKIAIDIIRDFDHNIMPLFGNPKASETISISPSGDETKVVDKVAENIIISKFKDLGV--N 63
Query: 93 WLSEETDDDLQRLNYETLFVVDPIDGTRAFIEGRNEWCISVAVVHHGRPVIGVVHASALG 152
+SEE Q +Y VVDP+DG+ FI G + +SVA+ H P+ ++ +
Sbjct: 64 VVSEEIGRIDQGSDY--TVVVDPLDGSYNFINGIPFFAVSVAIFHEKDPIYAFIYEPIVE 121
Query: 153 KEFFVSVGMKSTCNGKNISVSSNQMSDSLAIMASDVSLKGLDSYVRFRRQSSISSLCLRI 212
+ + G S NG+ I V S++ K +D R R + ++ L +
Sbjct: 122 RLYEGIPGKGSYLNGEKIKVRELAEKPSISFYTKGKGTKIIDKVKRTRT---LGAIALEL 178
Query: 213 LMIASGEVDVLIVDR-NANDWDLAAADLLLECSGGALVDIDRKLLTYNRSQVNHEVLFAS 271
+A G +D ++ R D+AA ++ +G + D+D K + S + A+
Sbjct: 179 AYLARGALDAVVDIRNYLRPTDIAAGVVIAREAGAIVKDLDGKDVEITFSATEKVNIIAA 238
Query: 272 A 272
Sbjct: 239 N 239
>d1xi6a_ e.7.1.1 (A:) Archaeal inositol
monophosphatase/fructose-1,6-bisphosphatase {Pyrococcus
furiosus [TaxId: 2261]}
Length = 249
Score = 54.3 bits (129), Expect = 1e-08
Identities = 44/243 (18%), Positives = 83/243 (34%), Gaps = 7/243 (2%)
Query: 32 KQDLDIVRSAVQGASTVAMQYF--LRSPNVWWKHEGSSPVCDADIAVNDYLESFLRPLRP 89
K ++ + T M +F + D D + S +
Sbjct: 3 KFWREVAIDIISDFETTIMPFFGNPDGGKLVKISPSGDETKLVDKLAEDLILSRIT--EL 60
Query: 90 AYGWLSEETDDDLQRLNYETLFVVDPIDGTRAFIEGRNEWCISVAVVHHGRPVIGVVHAS 149
+SEE Y +VDP+DG+ FI G + +S+AV +P+ +++
Sbjct: 61 GVNVVSEEVGVIDNESEYT--VIVDPLDGSYNFIAGIPFFALSLAVFKKDKPIYAIIYEP 118
Query: 150 ALGKEFFVSVGMKSTCNGKNISVSSNQMSDSLAIMASDVSLKGLDSYVRFRRQSSISSLC 209
+ F G + NGK I V S + +V+ R +L
Sbjct: 119 MTERFFEGIPGEGAFLNGKRIKVRKTPDEKPSISFYSRGKGHEIVKHVKRTRTLGAIALE 178
Query: 210 LRILMIASGEVDVLIVDRNANDWDLAAADLLLECSGGALVDIDRKLLTYNRSQVNHEVLF 269
L + V+ V + D+AA ++ + +G + D K + + + + +
Sbjct: 179 LAY-LAMGALDGVVDVRKYVRPTDIAAGTIIAKEAGALIKDSAGKDIDISFNATDRLDVI 237
Query: 270 ASA 272
A
Sbjct: 238 AVN 240
>g1or0.1 d.153.1.2 (A:,B:) Cephalosporin acylase {Pseudomonas sp.,
glutarylamidase [TaxId: 306]}
Length = 674
Score = 34.9 bits (79), Expect = 0.008
Identities = 14/116 (12%), Positives = 33/116 (28%), Gaps = 9/116 (7%)
Query: 39 RSAVQGASTVAMQYFLRSPNVWWKHEGSSPVCDADIA---------VNDYLESFLRPLRP 89
+ G +L + V + + D +N Y + + P
Sbjct: 58 GAEYWGPDYEQTTVWLLTNGVPERAQQWYAQQSPDFRANLDAFAAGINAYAQQNPDDISP 117
Query: 90 AYGWLSEETDDDLQRLNYETLFVVDPIDGTRAFIEGRNEWCISVAVVHHGRPVIGV 145
+ + D+ + + + R EG N W ++ +G ++
Sbjct: 118 DVRQVLPVSGADVVAHAHRLMNFLYVASPGRTLGEGSNSWAVAPGKTANGNALLLQ 173
>d1itwa_ c.77.1.2 (A:) Monomeric isocitrate dehydrogenase
{Azotobacter vinelandii [TaxId: 354]}
Length = 740
Score = 28.2 bits (63), Expect = 0.83
Identities = 15/80 (18%), Positives = 28/80 (35%), Gaps = 18/80 (22%)
Query: 73 DIAVNDYLESFLRPLR----PAYGWLSEETDDDLQRLNYETLF------------VVDPI 116
D + D+++ + R PA WL D Q + + ++ P+
Sbjct: 462 DAPIQDWVKLAVNRARATNTPAVFWLDPARAHDAQVIAKVERYLKDYDTSGLDIRILSPV 521
Query: 117 DGTRAFIE--GRNEWCISVA 134
+ TR + + ISV
Sbjct: 522 EATRFSLARIREGKDTISVT 541
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.322 0.136 0.420
Gapped
Lambda K H
0.267 0.0456 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,094,801
Number of extensions: 48524
Number of successful extensions: 153
Number of sequences better than 10.0: 1
Number of HSP's gapped: 144
Number of HSP's successfully gapped: 16
Length of query: 286
Length of database: 2,407,596
Length adjustment: 84
Effective length of query: 202
Effective length of database: 1,254,276
Effective search space: 253363752
Effective search space used: 253363752
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 52 (24.5 bits)