BLASTP 2.2.22 [Sep-27-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= gi|254780404|ref|YP_003064817.1| inositol monophosphatase
family protein [Candidatus Liberibacter asiaticus str. psy62]
         (286 letters)

Database: las_proteome 
           1233 sequences; 328,796 total letters

Searching...................................................done



>gi|254780404|ref|YP_003064817.1| inositol monophosphatase family protein [Candidatus Liberibacter
           asiaticus str. psy62]
          Length = 286

 Score =  591 bits (1524), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 286/286 (100%), Positives = 286/286 (100%)

Query: 1   MSMLHGMFGGMNLLYWYKKLCLMDIDFMYEWKQDLDIVRSAVQGASTVAMQYFLRSPNVW 60
           MSMLHGMFGGMNLLYWYKKLCLMDIDFMYEWKQDLDIVRSAVQGASTVAMQYFLRSPNVW
Sbjct: 1   MSMLHGMFGGMNLLYWYKKLCLMDIDFMYEWKQDLDIVRSAVQGASTVAMQYFLRSPNVW 60

Query: 61  WKHEGSSPVCDADIAVNDYLESFLRPLRPAYGWLSEETDDDLQRLNYETLFVVDPIDGTR 120
           WKHEGSSPVCDADIAVNDYLESFLRPLRPAYGWLSEETDDDLQRLNYETLFVVDPIDGTR
Sbjct: 61  WKHEGSSPVCDADIAVNDYLESFLRPLRPAYGWLSEETDDDLQRLNYETLFVVDPIDGTR 120

Query: 121 AFIEGRNEWCISVAVVHHGRPVIGVVHASALGKEFFVSVGMKSTCNGKNISVSSNQMSDS 180
           AFIEGRNEWCISVAVVHHGRPVIGVVHASALGKEFFVSVGMKSTCNGKNISVSSNQMSDS
Sbjct: 121 AFIEGRNEWCISVAVVHHGRPVIGVVHASALGKEFFVSVGMKSTCNGKNISVSSNQMSDS 180

Query: 181 LAIMASDVSLKGLDSYVRFRRQSSISSLCLRILMIASGEVDVLIVDRNANDWDLAAADLL 240
           LAIMASDVSLKGLDSYVRFRRQSSISSLCLRILMIASGEVDVLIVDRNANDWDLAAADLL
Sbjct: 181 LAIMASDVSLKGLDSYVRFRRQSSISSLCLRILMIASGEVDVLIVDRNANDWDLAAADLL 240

Query: 241 LECSGGALVDIDRKLLTYNRSQVNHEVLFASAKWHFPSFKQHLSTL 286
           LECSGGALVDIDRKLLTYNRSQVNHEVLFASAKWHFPSFKQHLSTL
Sbjct: 241 LECSGGALVDIDRKLLTYNRSQVNHEVLFASAKWHFPSFKQHLSTL 286


>gi|254780431|ref|YP_003064844.1| hypothetical protein CLIBASIA_01580 [Candidatus Liberibacter
           asiaticus str. psy62]
          Length = 178

 Score = 29.3 bits (64), Expect = 0.071,   Method: Compositional matrix adjust.
 Identities = 43/169 (25%), Positives = 72/169 (42%), Gaps = 22/169 (13%)

Query: 110 LFVVDPIDGTRAF-IEGRNEWCISVAVVHHGR-PVIGVVHASALGKEFFVSVGMKSTCNG 167
           ++ V+ ID  + F  EG +   I+V +    R  VIG +H   L     V+   +S  N 
Sbjct: 2   VWTVERIDKLKKFWSEGLSASQIAVQLGGVTRNAVIGKLHRLFLSNRVKVNENKQSDGNR 61

Query: 168 KNISV--SSNQMSDSLAIMASDVSLKGLDSYVRFRRQS-------SIS-------SLCLR 211
           KN+++  +S +   S  +   +  LKG    VR +R+S       +IS       S CLR
Sbjct: 62  KNVTLGSTSPKTRQSSNVYICEPVLKGQLPVVRSKRKSKSMEKNNTISSGIVLPISRCLR 121

Query: 212 ILMIASGEVDVLIVDRNANDWDLAAADLLLECSGGALVDIDRKLLTYNR 260
           ++ +        + D    D+    +D+   C+     D  +K L Y R
Sbjct: 122 LMELTDNTCKWPLGDPFGKDFSFCGSDV---CNDSPYCDYHKK-LAYQR 166


>gi|254780156|ref|YP_003064569.1| putative inositol-1-monophosphatase [Candidatus Liberibacter
           asiaticus str. psy62]
          Length = 256

 Score = 28.1 bits (61), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 10/52 (19%)

Query: 88  RPAYGWLSEET----DDDLQRLNYETLFVVDPIDGTRAFIEGRNEWCISVAV 135
           RP YG+ S        D + R      ++VDP++G   F      +CIS+A+
Sbjct: 61  RPKYGFYSGGKAYVGQDSITR------WIVDPLNGITNFFYAIPHFCISIAL 106


>gi|254781041|ref|YP_003065454.1| succinate dehydrogenase protein, cytochrome b subunit [Candidatus
          Liberibacter asiaticus str. psy62]
          Length = 129

 Score = 23.9 bits (50), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 9/21 (42%), Positives = 13/21 (61%)

Query: 2  SMLHGMFGGMNLLYWYKKLCL 22
          +++H M GG+  L W   LCL
Sbjct: 79 AVIHHMLGGIRYLIWDVSLCL 99


>gi|254780401|ref|YP_003064814.1| tetraacyldisaccharide 4'-kinase [Candidatus Liberibacter asiaticus
           str. psy62]
          Length = 338

 Score = 23.5 bits (49), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 14/53 (26%), Positives = 22/53 (41%), Gaps = 13/53 (24%)

Query: 54  LRSPNVWWKHEGSSPVCDADIAVNDYLESFLRPLRPAYGWLSEETDDDLQRLN 106
           ++SP  WWK  G             +   FL P+   Y ++S +     QRL+
Sbjct: 2   MKSPLFWWKARG-------------FYSFFLYPISWIYSFISSKLMKRGQRLH 41


  Database: las_proteome
    Posted date:  Jun 5, 2011  6:30 PM
  Number of letters in database: 328,796
  Number of sequences in database:  1233
  
Lambda     K      H
   0.322    0.136    0.420 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 182,826
Number of Sequences: 1233
Number of extensions: 7375
Number of successful extensions: 22
Number of sequences better than 100.0: 6
Number of HSP's better than 100.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 18
Number of HSP's gapped (non-prelim): 6
length of query: 286
length of database: 328,796
effective HSP length: 73
effective length of query: 213
effective length of database: 238,787
effective search space: 50861631
effective search space used: 50861631
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 38 (19.2 bits)