HHsearch alignment for GI: 254780405 and conserved domain: COG0116
>COG0116 Predicted N6-adenine-specific DNA methylase [DNA replication, recombination, and repair].
Probab=99.22 E-value=1.2e-11 Score=89.93 Aligned_cols=124 Identities=17% Similarity=0.209 Sum_probs=89.2
Q ss_pred CHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCHHHHHCCCCC----------------------------------
Q ss_conf 8589999999877633364558967861100122210011016873----------------------------------
Q gi|254780405|r 27 SDSRTKKALFDILTHVYPVFLDSTRMLNIFAGTGSVGFEALSRGCH---------------------------------- 72 (189)
Q Consensus 27 t~~~vrealFniL~~~~~~~~~~~~vlDlfaGsG~lgiEalSrGA~---------------------------------- 72 (189)
T Consensus 171 g~ApLketLAaAil~lag-w~~~~pl~DPmCGSGTi~IEAAl~~~niAPg~~R~~~f~~w~~~~~~lw~~~~~ea~~~a~ 249 (381)
T COG0116 171 GPAPLKETLAAAILLLAG-WKPDEPLLDPMCGSGTILIEAALIAANIAPGLNRRFGFEFWDWFDKDLWDKLREEAEERAR 249 (381)
T ss_pred CCCCCHHHHHHHHHHHCC-CCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHH
T ss_conf 887856999999999739-9999834168877347999999734456876332200455432138889999999999865
Q ss_pred ------CHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHC---------CHHHHH
Q ss_conf ------30111000123566764200133221002234456654210034444310151343100---------028889
Q gi|254780405|r 73 ------YVLFVDNNSESIRLIRRNSELLGVEKNCNIFFRDVLRLGKIGNISPFQLVYLDPPYGQG---------LAQQAL 137 (189)
Q Consensus 73 ------~v~~vE~~~~a~~~lk~N~~~~~~~~~~~ii~~D~~~~~~~~~~~~fDiIf~DPPY~~~---------~~~~~l 137 (189)
T Consensus 250 ~~~~~~~~~G~Did~r~i~~Ak~NA~~AGv~d~I~f~~~d~~~l~~~~--~~~gvvI~NPPYGeRlg~~~~v~~LY~~fg 327 (381)
T COG0116 250 RGKELPIIYGSDIDPRHIEGAKANARAAGVGDLIEFKQADATDLKEPL--EEYGVVISNPPYGERLGSEALVAKLYREFG 327 (381)
T ss_pred HCCCCCEEEEECCCHHHHHHHHHHHHHCCCCCEEEEEECCHHHCCCCC--CCCCEEEECCCCHHHCCCHHHHHHHHHHHH
T ss_conf 147666589874898999999998997698832899974432166876--669989958983011177046999999999
Q ss_pred HHHHHCCCCCCCEEEEEE
Q ss_conf 888744888897499998
Q gi|254780405|r 138 AIIDKEGWLEPNALVIIE 155 (189)
Q Consensus 138 ~~l~~~~~L~~~gliiiE 155 (189)
T Consensus 328 ~~lk~--~~~~ws~~v~t 343 (381)
T COG0116 328 RTLKR--LLAGWSRYVFT 343 (381)
T ss_pred HHHHH--HHCCCCEEEEE
T ss_conf 99998--72577369997