HHsearch alignment for GI: 254780405 and conserved domain: COG0338
>COG0338 Dam Site-specific DNA methylase [DNA replication, recombination, and repair].
Probab=94.48 E-value=0.031 Score=34.14 Aligned_cols=46 Identities=20% Similarity=0.294 Sum_probs=28.0
Q ss_pred HHHHHHHHCCCCCCCCCEEEECCCCCCCCHHHHHCCCCCCHHHHHHHHHHH
Q ss_conf 999877633364558967861100122210011016873301110001235
Q gi|254780405|r 34 ALFDILTHVYPVFLDSTRMLNIFAGTGSVGFEALSRGCHYVLFVDNNSESI 84 (189)
Q Consensus 34 alFniL~~~~~~~~~~~~vlDlfaGsG~lgiEalSrGA~~v~~vE~~~~a~ 84 (189)
T Consensus 14 ~l~~~i~~~lP~~---~~y~EPF~GggaV~i~~~~~--~~~i~~Din~~Lv 59 (274)
T COG0338 14 KLLDQIIPHLPEG---VSYIEPFVGGGAVFINLAAK--KKYILNDINPDLV 59 (274)
T ss_pred HHHHHHHHHCCCC---CEEECCCCCCCEEEEEHHHH--HHHHHHCCCHHHH
T ss_conf 8999999858887---61637766742010323022--4466750788999