HHsearch alignment for GI: 254780405 and conserved domain: COG1743

>COG1743 Adenine-specific DNA methylase containing a Zn-ribbon [DNA replication, recombination, and repair].
Probab=96.68  E-value=0.0007  Score=43.89  Aligned_cols=48  Identities=29%  Similarity=0.405  Sum_probs=43.1

Q ss_pred             CCCCCEEEECCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCC
Q ss_conf             5589678611001222100110168733011100012356676420013
Q gi|254780405|r   46 FLDSTRMLNIFAGTGSVGFEALSRGCHYVLFVDNNSESIRLIRRNSELL   94 (189)
Q Consensus        46 ~~~~~~vlDlfaGsG~lgiEalSrGA~~v~~vE~~~~a~~~lk~N~~~~   94 (189)
T Consensus        88 ~~~~~~~lDPfAG~GSIPlEAlRLG~-~v~AvelnPvAylfLKavlEyP  135 (875)
T COG1743          88 PFEGPKLLDPFAGGGSIPLEALRLGL-EVVAVELNPVAYLFLKAVLEYP  135 (875)
T ss_pred             CCCCCCCCCCCCCCCCCCHHHHHCCC-EEEEEECCCHHHHHHHHHHHCC
T ss_conf             45687402665689866358886476-3689731608999999997214