HHsearch alignment for GI: 254780405 and conserved domain: COG2226
>COG2226 UbiE Methylase involved in ubiquinone/menaquinone biosynthesis [Coenzyme metabolism].
Probab=98.90 E-value=1.5e-09 Score=77.49 Aligned_cols=122 Identities=18% Similarity=0.225 Sum_probs=87.8
Q ss_pred HHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCHHHHH-CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH
Q ss_conf 899999998776333645589678611001222100110-1687330111000123566764200133221002234456
Q gi|254780405|r 29 SRTKKALFDILTHVYPVFLDSTRMLNIFAGTGSVGFEAL-SRGCHYVLFVDNNSESIRLIRRNSELLGVEKNCNIFFRDV 107 (189)
Q Consensus 29 ~~vrealFniL~~~~~~~~~~~~vlDlfaGsG~lgiEal-SrGA~~v~~vE~~~~a~~~lk~N~~~~~~~~~~~ii~~D~ 107 (189)
T Consensus 37 ~~Wr~~~i~~~~~~-----~g~~vLDva~GTGd~a~~~~k~~g~g~v~~~D~s~~ML~~a~~k~~~~~~~~-i~fv~~dA 110 (238)
T COG2226 37 RLWRRALISLLGIK-----PGDKVLDVACGTGDMALLLAKSVGTGEVVGLDISESMLEVAREKLKKKGVQN-VEFVVGDA 110 (238)
T ss_pred HHHHHHHHHHHCCC-----CCCEEEEECCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHCCCCCC-EEEEEECH
T ss_conf 99999999860789-----9987999668731999999996588449999799999999998743247663-27997056
Q ss_pred HHHHHHCCCCCCCCCCCCHHHHHCCHHHHHHHHHH-CCCCCCCEEEE-EECCCCC
Q ss_conf 65421003444431015134310002888988874-48888974999-9817788
Q gi|254780405|r 108 LRLGKIGNISPFQLVYLDPPYGQGLAQQALAIIDK-EGWLEPNALVI-IEEYAGT 160 (189)
Q Consensus 108 ~~~~~~~~~~~fDiIf~DPPY~~~~~~~~l~~l~~-~~~L~~~glii-iE~~~~~ 160 (189)
T Consensus 111 e~LP--f~D~sFD~vt~~--fglrnv~d~~~aL~E~~RVlKpgG~~~vle~~~p~ 161 (238)
T COG2226 111 ENLP--FPDNSFDAVTIS--FGLRNVTDIDKALKEMYRVLKPGGRLLVLEFSKPD 161 (238)
T ss_pred HHCC--CCCCCCCEEEEE--EHHHCCCCHHHHHHHHHHHHCCCEEEEEEECCCCC
T ss_conf 5498--888765889865--12352787899999998762687499998768998