HHsearch alignment for GI: 254780405 and conserved domain: COG2242

Probab=99.39  E-value=5.7e-13  Score=97.80  Aligned_cols=118  Identities=20%  Similarity=0.271  Sum_probs=99.0

Q ss_pred             CCCHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCHHHHH-CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHH
Q ss_conf             7785899999998776333645589678611001222100110-168733011100012356676420013322100223
Q gi|254780405|r   25 RPSDSRTKKALFDILTHVYPVFLDSTRMLNIFAGTGSVGFEAL-SRGCHYVLFVDNNSESIRLIRRNSELLGVEKNCNIF  103 (189)
Q Consensus        25 RPt~~~vrealFniL~~~~~~~~~~~~vlDlfaGsG~lgiEal-SrGA~~v~~vE~~~~a~~~lk~N~~~~~~~~~~~ii  103 (189)
T Consensus        16 p~TK~EIRal~ls~L~~~-----~g~~l~DIGaGtGsi~iE~a~~~p~~~v~AIe~~~~a~~~~~~N~~~fg~-~n~~vv   89 (187)
T COG2242          16 PMTKEEIRALTLSKLRPR-----PGDRLWDIGAGTGSITIEWALAGPSGRVIAIERDEEALELIERNAARFGV-DNLEVV   89 (187)
T ss_pred             CCCHHHHHHHHHHHHCCC-----CCCEEEEECCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHCC-CCEEEE
T ss_conf             986799899889860889-----99989995788668999999739885599992588899999999998499-967999


Q ss_pred             HHHHHHHHHHCCCCCCCCCCCCHHHHHCCHHHHHHHHHHCCCCCCCEEEEEE
Q ss_conf             4456654210034444310151343100028889888744888897499998
Q gi|254780405|r  104 FRDVLRLGKIGNISPFQLVYLDPPYGQGLAQQALAIIDKEGWLEPNALVIIE  155 (189)
Q Consensus       104 ~~D~~~~~~~~~~~~fDiIf~DPPY~~~~~~~~l~~l~~~~~L~~~gliiiE  155 (189)
T Consensus        90 ~g~Ap~~L~~~--~~~daiFIG---Gg~~i~~ile~~~~--~l~~ggrlV~n  134 (187)
T COG2242          90 EGDAPEALPDL--PSPDAIFIG---GGGNIEEILEAAWE--RLKPGGRLVAN  134 (187)
T ss_pred             ECCCHHHHCCC--CCCCEEEEC---CCCCHHHHHHHHHH--HCCCCCEEEEE
T ss_conf             54645763699--999999987---98777899999999--71868769998