HHsearch alignment for GI: 254780405 and conserved domain: KOG1271
>KOG1271 consensus.
Probab=97.99 E-value=9.3e-06 Score=55.03 Aligned_cols=139 Identities=19% Similarity=0.216 Sum_probs=86.8
Q ss_pred HHHHHHHHHHHCCC---CCCCCC-EEEECCCCCCCCHHHHHCCCCCC-HHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH
Q ss_conf 99999987763336---455896-78611001222100110168733-01110001235667642001332210022344
Q gi|254780405|r 31 TKKALFDILTHVYP---VFLDST-RMLNIFAGTGSVGFEALSRGCHY-VLFVDNNSESIRLIRRNSELLGVEKNCNIFFR 105 (189)
Q Consensus 31 vrealFniL~~~~~---~~~~~~-~vlDlfaGsG~lgiEalSrGA~~-v~~vE~~~~a~~~lk~N~~~~~~~~~~~ii~~ 105 (189)
T Consensus 47 ae~riv~wl~d~~~~~rv~-~~A~~VlDLGtGNG~~L~~L~~egf~~~L~GvDYs~~AV~LA~niAe~~~~~n~I~f~q~ 125 (227)
T KOG1271 47 AEERIVDWLKDLIVISRVS-KQADRVLDLGTGNGHLLFQLAKEGFQSKLTGVDYSEKAVELAQNIAERDGFSNEIRFQQL 125 (227)
T ss_pred HHHHHHHHHHHHHHHHHHC-CCCCCEEECCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEE
T ss_conf 8999999998654441102-243211661579618899988713888864531578899999878875278853168873
Q ss_pred HHHHHHHHCCCCCCCCCCCCHHHH---------HCCHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCC-----CCCCEEE
Q ss_conf 566542100344443101513431---------00028889888744888897499998177888675-----7885799
Q gi|254780405|r 106 DVLRLGKIGNISPFQLVYLDPPYG---------QGLAQQALAIIDKEGWLEPNALVIIEEYAGTCISV-----GAAFHFL 171 (189)
Q Consensus 106 D~~~~~~~~~~~~fDiIf~DPPY~---------~~~~~~~l~~l~~~~~L~~~gliiiE~~~~~~~~~-----~~~~~~~ 171 (189)
T Consensus 126 DI~~~--~~~~~qfdlvlDKGT~DAisLs~d~~~~r~~~Y~d~v--~~ll~~~gifvItSCN~T~dELv~~f~~~~f~~~ 201 (227)
T KOG1271 126 DITDP--DFLSGQFDLVLDKGTLDAISLSPDGPVGRLVVYLDSV--EKLLSPGGIFVITSCNFTKDELVEEFENFNFEYL 201 (227)
T ss_pred ECCCC--CCCCCCEEEEEECCCEEEEECCCCCCCCCEEEEHHHH--HHCCCCCCEEEEEECCCCHHHHHHHHHCCCEEEE
T ss_conf 22577--5555432389605741225507777665434435568--6303889679998557658999999725974999
Q ss_pred EEE
Q ss_conf 983
Q gi|254780405|r 172 QER 174 (189)
Q Consensus 172 ~~k 174 (189)
T Consensus 202 ~tv 204 (227)
T KOG1271 202 STV 204 (227)
T ss_pred EEE
T ss_conf 960