HHsearch alignment for GI: 254780405 and conserved domain: KOG1499

Probab=99.16  E-value=2e-11  Score=88.71  Aligned_cols=105  Identities=18%  Similarity=0.308  Sum_probs=83.8

Q ss_pred             CCCCCCCEEEECCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCC
Q ss_conf             64558967861100122210011016873301110001235667642001332210022344566542100344443101
Q gi|254780405|r   44 PVFLDSTRMLNIFAGTGSVGFEALSRGCHYVLFVDNNSESIRLIRRNSELLGVEKNCNIFFRDVLRLGKIGNISPFQLVY  123 (189)
Q Consensus        44 ~~~~~~~~vlDlfaGsG~lgiEalSrGA~~v~~vE~~~~a~~~lk~N~~~~~~~~~~~ii~~D~~~~~~~~~~~~fDiIf  123 (189)
T Consensus        56 ~~lf~dK~VlDVGcGtGILS~F~akAGA~~V~aVe~S~ia-~~a~~iv~~N~~~~ii~vi~gkvEdi-~-LP~eKVDiIv  132 (346)
T KOG1499          56 KHLFKDKTVLDVGCGTGILSMFAAKAGARKVYAVEASSIA-DFARKIVKDNGLEDVITVIKGKVEDI-E-LPVEKVDIIV  132 (346)
T ss_pred             HHHCCCCEEEECCCCCCHHHHHHHHHCCCEEEEEECHHHH-HHHHHHHHHCCCCCEEEEEECCEEEE-E-CCCCCEEEEE
T ss_conf             4330797899757881288999887375339999626899-99999998568660599950305787-6-4755402996


Q ss_pred             CCHHH-HH-CCHHHHHHHH--HHCCCCCCCEEEE
Q ss_conf             51343-10-0028889888--7448888974999
Q gi|254780405|r  124 LDPPY-GQ-GLAQQALAII--DKEGWLEPNALVI  153 (189)
Q Consensus       124 ~DPPY-~~-~~~~~~l~~l--~~~~~L~~~glii  153 (189)
T Consensus       133 SE--WMGy~Ll~EsMldsVl~ARdkwL~~~G~i~  164 (346)
T KOG1499         133 SE--WMGYFLLYESMLDSVLYARDKWLKEGGLIY  164 (346)
T ss_pred             EH--HHHHHHHHHHHHHHHHHHHHHCCCCCCEEC
T ss_conf             30--124787776566645533330047795576