HHsearch alignment for GI: 254780405 and conserved domain: KOG1540

Probab=97.76  E-value=2.1e-05  Score=52.94  Aligned_cols=109  Identities=15%  Similarity=0.170  Sum_probs=73.8

Q ss_pred             CCCEEEECCCCCCCCHHHHHCC-CC------CCHHHHHHHHHHHHHHHHHHCCCCCCCC--HHHHHHHHHHHHHHCCCCC
Q ss_conf             8967861100122210011016-87------3301110001235667642001332210--0223445665421003444
Q gi|254780405|r   48 DSTRMLNIFAGTGSVGFEALSR-GC------HYVLFVDNNSESIRLIRRNSELLGVEKN--CNIFFRDVLRLGKIGNISP  118 (189)
Q Consensus        48 ~~~~vlDlfaGsG~lgiEalSr-GA------~~v~~vE~~~~a~~~lk~N~~~~~~~~~--~~ii~~D~~~~~~~~~~~~  118 (189)
T Consensus       100 ~~m~~lDvaGGTGDiaFril~~v~s~~~~~~~~V~v~Dinp~mL~vgkqRa~~~~l~~~~~~~w~~~dAE~Lp--Fdd~s  177 (296)
T KOG1540         100 KGMKVLDVAGGTGDIAFRILRHVKSQFGDRESKVTVLDINPHMLAVGKQRAKKRPLKASSRVEWVEGDAEDLP--FDDDS  177 (296)
T ss_pred             CCCEEEEECCCCCHHHHHHHHHHCCCCCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCC--CCCCC
T ss_conf             7875898347752567779876113457777617999389899999987775159776871699947701089--99775


Q ss_pred             CCCCCCCHHHHHCCHHHHHHHHHH-CCCCCCCEEEEE-ECCCCC
Q ss_conf             431015134310002888988874-488889749999-817788
Q gi|254780405|r  119 FQLVYLDPPYGQGLAQQALAIIDK-EGWLEPNALVII-EEYAGT  160 (189)
Q Consensus       119 fDiIf~DPPY~~~~~~~~l~~l~~-~~~L~~~gliii-E~~~~~  160 (189)
T Consensus       178 ~D~yTia--fGIRN~th~~k~l~EAYRVLKpGGrf~cLeFskv~  219 (296)
T KOG1540         178 FDAYTIA--FGIRNVTHIQKALREAYRVLKPGGRFSCLEFSKVE  219 (296)
T ss_pred             CEEEEEE--CCEECCCCHHHHHHHHHHHCCCCCEEEEEECCCCC
T ss_conf             1158884--21114787789999998752778679999735454