HHsearch alignment for GI: 254780405 and conserved domain: PRK00274
>PRK00274 ksgA dimethyladenosine transferase; Reviewed.
Probab=98.12 E-value=1.1e-06 Score=60.46 Aligned_cols=74 Identities=22% Similarity=0.249 Sum_probs=58.0
Q ss_pred CCCEEEECCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH-CCCCCCCCCCCCH
Q ss_conf 896786110012221001101687330111000123566764200133221002234456654210-0344443101513
Q gi|254780405|r 48 DSTRMLNIFAGTGSVGFEALSRGCHYVLFVDNNSESIRLIRRNSELLGVEKNCNIFFRDVLRLGKI-GNISPFQLVYLDP 126 (189)
Q Consensus 48 ~~~~vlDlfaGsG~lgiEalSrGA~~v~~vE~~~~a~~~lk~N~~~~~~~~~~~ii~~D~~~~~~~-~~~~~fDiIf~DP 126 (189)
T Consensus 39 ~~d~VlEIGpG~G~LT~~Ll~~~~-~v~aiEiD~~l~~~L~~~-------~~~~ii~~D~L~~~~~~~~~~~~~~vvgNL 110 (267)
T PRK00274 39 PGDRVLEIGPGLGALTEPLLERAA-KVTAIEIDRDLAPILRET-------DNLTIIEGDALKVDLEELAEGQPLKVVANL 110 (267)
T ss_pred CCCEEEEECCCCCHHHHHHHHHCC-CEEEEECCHHHHHHHHHC-------CCEEEEECHHHHCCHHHHCCCCCEEEEECC
T ss_conf 999079963888889999996268-058863688999998504-------786999650664786774567872799558
Q ss_pred HHH
Q ss_conf 431
Q gi|254780405|r 127 PYG 129 (189)
Q Consensus 127 PY~ 129 (189)
T Consensus 111 PY~ 113 (267)
T PRK00274 111 PYN 113 (267)
T ss_pred CCH
T ss_conf 830