HHsearch alignment for GI: 254780405 and conserved domain: PRK03612
>PRK03612 spermidine synthase; Provisional.
Probab=98.51 E-value=1.3e-07 Score=66.04 Aligned_cols=108 Identities=19% Similarity=0.252 Sum_probs=80.5
Q ss_pred CCCEEEECCCCCCCCHHHHHCC-CCCCHHHHHHHHHHHHHHHHH--HCCCCC----CCCHHHHHHHHHHHHHHCCCCCCC
Q ss_conf 8967861100122210011016-873301110001235667642--001332----210022344566542100344443
Q gi|254780405|r 48 DSTRMLNIFAGTGSVGFEALSR-GCHYVLFVDNNSESIRLIRRN--SELLGV----EKNCNIFFRDVLRLGKIGNISPFQ 120 (189)
Q Consensus 48 ~~~~vlDlfaGsG~lgiEalSr-GA~~v~~vE~~~~a~~~lk~N--~~~~~~----~~~~~ii~~D~~~~~~~~~~~~fD 120 (189)
T Consensus 293 ~p~~VLiiGGGdG~a~revLk~~~ve~v~lVelD~~vv~lar~~~~l~~~n~~a~~DpRv~v~~~Da~~~l~~~~-~~yD 371 (516)
T PRK03612 293 RARRVLILGGGDGLALREVLKYPDVEQVTLVDLDPAVTELARTSPALRALNGGALDDPRVTVVNDDAFNWLRKLP-ETFD 371 (516)
T ss_pred CCCEEEEECCCCCHHHHHHHCCCCCCEEEEEECCHHHHHHHHHCCCHHHHHCCCCCCCCEEEEEHHHHHHHHHCC-CCCC
T ss_conf 977389983776087999864899663789951889999998572144441232349964898537899998688-8788
Q ss_pred CCCCCHHH--HH---CCHH-HHHHHHHHCCCCCCCEEEEEECCC
Q ss_conf 10151343--10---0028-889888744888897499998177
Q gi|254780405|r 121 LVYLDPPY--GQ---GLAQ-QALAIIDKEGWLEPNALVIIEEYA 158 (189)
Q Consensus 121 iIf~DPPY--~~---~~~~-~~l~~l~~~~~L~~~gliiiE~~~ 158 (189)
T Consensus 372 vIi~D~pdP~~~~~~~LYs~eFY~~~~--~~L~~~G~~v~qs~S 413 (516)
T PRK03612 372 AIIVDLPDPSNPALGKLYSVEFYRLLK--RRLAPDGLLVVQSTS 413 (516)
T ss_pred EEEEECCCCCCCCCCCCCCHHHHHHHH--HHCCCCCEEEEECCC
T ss_conf 899818997995224675399999999--844999589993689