HHsearch alignment for GI: 254780405 and conserved domain: PRK09489

Probab=99.25  E-value=2.7e-12  Score=93.76  Aligned_cols=108  Identities=18%  Similarity=0.253  Sum_probs=80.0

Q ss_pred             CCCCCEEEECCCCCCCCHHHHHCCCC-CCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCC
Q ss_conf             55896786110012221001101687-33011100012356676420013322100223445665421003444431015
Q gi|254780405|r   46 FLDSTRMLNIFAGTGSVGFEALSRGC-HYVLFVDNNSESIRLIRRNSELLGVEKNCNIFFRDVLRLGKIGNISPFQLVYL  124 (189)
Q Consensus        46 ~~~~~~vlDlfaGsG~lgiEalSrGA-~~v~~vE~~~~a~~~lk~N~~~~~~~~~~~ii~~D~~~~~~~~~~~~fDiIf~  124 (189)
T Consensus       195 ~~~-g~VLDlGCG~Gvi~~~la~~~p~~~v~l~Dv~a~Al~~ar~nl~~N~l~--~~v~~sd~~~~v~----~~fD~Ivs  267 (342)
T PRK09489        195 HTK-GKVLDVGCGAGVLSAVLAQHSPKIRLTLCDVSAPAVEASRATLAANGLE--GEVFASNVFSEIK----GRFDMIIS  267 (342)
T ss_pred             CCC-CCEEEECCCHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHCCC--CEEEECCCCCCCC----CCCCEEEE
T ss_conf             248-8478606781799999998699976999968899999999989980988--6899756445655----67898996


Q ss_pred             CHHHHHCCH--HHHHH-HHH-HCCCCCCCEEEEEECCCCC
Q ss_conf             134310002--88898-887-4488889749999817788
Q gi|254780405|r  125 DPPYGQGLA--QQALA-IID-KEGWLEPNALVIIEEYAGT  160 (189)
Q Consensus       125 DPPY~~~~~--~~~l~-~l~-~~~~L~~~gliiiE~~~~~  160 (189)
T Consensus       268 NPPFH~G~~~~~~i~~~fi~~A~~~L~~gG~L~iVANr~L  307 (342)
T PRK09489        268 NPPFHDGIQTSLDAAQTLIRGAVRHLNSGGELRIVANAFL  307 (342)
T ss_pred             CCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCC
T ss_conf             8852157526589999999999986124988999981898