HHsearch alignment for GI: 254780405 and conserved domain: PRK10901
>PRK10901 16S rRNA methyltransferase B; Provisional.
Probab=98.74 E-value=6.2e-09 Score=73.87 Aligned_cols=106 Identities=17% Similarity=0.217 Sum_probs=73.3
Q ss_pred CCCCEEEECCCCCCCCHHH--HHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCC
Q ss_conf 5896786110012221001--10168733011100012356676420013322100223445665421003444431015
Q gi|254780405|r 47 LDSTRMLNIFAGTGSVGFE--ALSRGCHYVLFVDNNSESIRLIRRNSELLGVEKNCNIFFRDVLRLGKIGNISPFQLVYL 124 (189)
Q Consensus 47 ~~~~~vlDlfaGsG~lgiE--alSrGA~~v~~vE~~~~a~~~lk~N~~~~~~~~~~~ii~~D~~~~~~~~~~~~fDiIf~ 124 (189)
T Consensus 244 ~~g~~VLD~CAaPGGKt~~la~~~~~~-~v~A~D~~~~Rl~~l~~n~~Rlg~~--~~v~~~d~~~~~~~~~~~~fD~ILl 320 (428)
T PRK10901 244 QNGEHILDLCAAPGGKTTHILEVAPEA-QVLAVDIDEQRLSRVYDNLKRLGMK--ATVKQGDGRYPSQWCGEQQFDRILL 320 (428)
T ss_pred CCCCEEEEECCCCCHHHHHHHHHCCCC-CEEEEECCHHHHHHHHHHHHHCCCC--EEEEECCCCCHHHHCCCCCCCEEEE
T ss_conf 889879871688766899999964589-2899969888999999999975997--3999776557233134456787997
Q ss_pred CHHHH----------------HCCHHH---HH-HHHHH-CCCCCCCEEEEEE
Q ss_conf 13431----------------000288---89-88874-4888897499998
Q gi|254780405|r 125 DPPYG----------------QGLAQQ---AL-AIIDK-EGWLEPNALVIIE 155 (189)
Q Consensus 125 DPPY~----------------~~~~~~---~l-~~l~~-~~~L~~~gliiiE 155 (189)
T Consensus 321 DaPCSg~G~lrR~Pdikw~~~~~di~~l~~lQ~~iL~~a~~~lk~gG~LvYs 372 (428)
T PRK10901 321 DAPCSATGVIRRHPDIKWLRRDRDIAELAQLQSEILDAIWPHLKSGGTLVYA 372 (428)
T ss_pred CCCCCCCEEECCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEE
T ss_conf 5898887244468542112899999999999999999999866889889999