HHsearch alignment for GI: 254780405 and conserved domain: PRK11783

>PRK11783 rlmL 23S rRNA m(2)G2445 methyltransferase; Provisional.
Probab=99.71  E-value=1.3e-17  Score=125.35  Aligned_cols=122  Identities=22%  Similarity=0.316  Sum_probs=100.1

Q ss_pred             CCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCC-CCHH
Q ss_conf             867785899999998776333645589678611001222100110168733011100012356676420013322-1002
Q gi|254780405|r   23 SIRPSDSRTKKALFDILTHVYPVFLDSTRMLNIFAGTGSVGFEALSRGCHYVLFVDNNSESIRLIRRNSELLGVE-KNCN  101 (189)
Q Consensus        23 ~~RPt~~~vrealFniL~~~~~~~~~~~~vlDlfaGsG~lgiEalSrGA~~v~~vE~~~~a~~~lk~N~~~~~~~-~~~~  101 (189)
T Consensus       539 DhR~~R~~i~~~------------a~gk~fLNLF~YTgt~sv~Aa~gGA~~t~sVD~S~tyl~Wa~~N~~lN~~~~~~h~  606 (716)
T PRK11783        539 DHRPTRRMIGQM------------AKGKRFLNLFAYTGTASVHAALGGAKSTTTVDMSNTYLEWAERNFALNGLSGRQHR  606 (716)
T ss_pred             CCHHHHHHHHHH------------HCCCCEEEEEECCCCEEHHHHHCCCCEEEEECCCHHHHHHHHHHHHHCCCCCCCCE
T ss_conf             437999999997------------07884643122256102133527961227862708799999999985499963473


Q ss_pred             HHHHHHHHHHHHCCCCCCCCCCCCHHH-HH-----------CCHHHHHHHHHHCCCCCCCEEEEEECCCC
Q ss_conf             234456654210034444310151343-10-----------00288898887448888974999981778
Q gi|254780405|r  102 IFFRDVLRLGKIGNISPFQLVYLDPPY-GQ-----------GLAQQALAIIDKEGWLEPNALVIIEEYAG  159 (189)
Q Consensus       102 ii~~D~~~~~~~~~~~~fDiIf~DPPY-~~-----------~~~~~~l~~l~~~~~L~~~gliiiE~~~~  159 (189)
T Consensus       607 ~v~aD~~~wl~~~-~~~fDli~~DPPtFSnSk~m~~~~dvqrDh~~li~~~--~~~L~~~G~l~FS~N~r  673 (716)
T PRK11783        607 FIQADCLAWLKEA-REQFDLIFIDPPTFSNSKRMEDSFDVQRDHVALIKLA--MRLLRPGGTLYFSNNKR  673 (716)
T ss_pred             EEECCHHHHHHHC-CCCCCEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHH--HHHCCCCCEEEEECCCC
T ss_conf             8964089999857-7766789988999987666788632203099999999--98608996899962887