HHsearch alignment for GI: 254780405 and conserved domain: pfam02005
>pfam02005 TRM N2,N2-dimethylguanosine tRNA methyltransferase. This enzyme EC:2.1.1.32 used S-AdoMet to methylate tRNA. The TRM1 gene of Saccharomyces cerevisiae is necessary for the N2,N2-dimethylguanosine modification of both mitochondrial and cytoplasmic tRNAs. The enzyme is found in both eukaryotes and archaebacteria
Probab=98.92 E-value=1.4e-09 Score=77.79 Aligned_cols=147 Identities=20% Similarity=0.241 Sum_probs=94.7
Q ss_pred CCCCHHHHHHHHHHH---HHHCCCCCCCCCEEEECCCCCCCCHHHHH-C-CCCCCHHHHHHHHHHHHHHHHHHCCCCCCC
Q ss_conf 677858999999987---76333645589678611001222100110-1-687330111000123566764200133221
Q gi|254780405|r 24 IRPSDSRTKKALFDI---LTHVYPVFLDSTRMLNIFAGTGSVGFEAL-S-RGCHYVLFVDNNSESIRLIRRNSELLGVEK 98 (189)
Q Consensus 24 ~RPt~~~vrealFni---L~~~~~~~~~~~~vlDlfaGsG~lgiEal-S-rGA~~v~~vE~~~~a~~~lk~N~~~~~~~~ 98 (189)
T Consensus 22 YNP~~~~NRDlsvl~i~~~~~~~~~~~~~~~iLDalsasGiR~iRya~E~~~~~~V~~NDi~~~a~~~i~~N~~lN~~~~ 101 (375)
T pfam02005 22 YNPRMEFNRDLSVTVIRQLNLLHKKLGRGIIVLDALSASGIRAIRFALEVPGVEEVFANDISPKAVELIKENVKLNEVEN 101 (375)
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHCCCCC
T ss_conf 58501023219999999999864302588669754675419999999746998669995599899999999888659987
Q ss_pred CHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHH--CCHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCEEEEEEEC
Q ss_conf 00223445665421003444431015134310--0028889888744888897499998177888675788579998341
Q gi|254780405|r 99 NCNIFFRDVLRLGKIGNISPFQLVYLDPPYGQ--GLAQQALAIIDKEGWLEPNALVIIEEYAGTCISVGAAFHFLQERKY 176 (189)
Q Consensus 99 ~~~ii~~D~~~~~~~~~~~~fDiIf~DPPY~~--~~~~~~l~~l~~~~~L~~~gliiiE~~~~~~~~~~~~~~~~~~k~y 176 (189)
T Consensus 102 ~~~~~~~DAn~lm~~-~~~~fD~IDlDP-fGSp~pfldsAi~a------v~~~GlL~vTaT--D~a~L~G~~~~~~~r~Y 171 (375)
T pfam02005 102 IVVINGDDANMLMRE-NHRRFDVIDLDP-FGSPAPFLDSAVQS------VKRGGLLCVTAT--DTAVLCGAYPEACLRKY 171 (375)
T ss_pred EEEECHHHHHHHHHH-CCCCCCEEEECC-CCCCCHHHHHHHHH------HCCCCEEEEEEC--CCHHHCCCCCHHHHHHC
T ss_conf 378754759999985-588675686789-99921779999998------315988999944--63353178825789871
Q ss_pred CCEE
Q ss_conf 8569
Q gi|254780405|r 177 GDTK 180 (189)
Q Consensus 177 G~t~ 180 (189)
T Consensus 172 ga~~ 175 (375)
T pfam02005 172 GAVP 175 (375)
T ss_pred CCEE
T ss_conf 9973