HHsearch alignment for GI: 254780405 and conserved domain: pfam03602
>pfam03602 Cons_hypoth95 Conserved hypothetical protein 95.
Probab=100.00 E-value=0 Score=380.44 Aligned_cols=179 Identities=39% Similarity=0.786 Sum_probs=160.7
Q ss_pred EEEEEEEECCEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCHHHHHCCCCCCHHHHHHHHHH
Q ss_conf 19986410886744378888677858999999987763336455896786110012221001101687330111000123
Q gi|254780405|r 4 IRIIGGKFQRRLLHTPQNRSIRPSDSRTKKALFDILTHVYPVFLDSTRMLNIFAGTGSVGFEALSRGCHYVLFVDNNSES 83 (189)
Q Consensus 4 mrii~G~~kg~~l~~~~~~~~RPt~~~vrealFniL~~~~~~~~~~~~vlDlfaGsG~lgiEalSrGA~~v~~vE~~~~a 83 (189)
T Consensus 1 mRIisG~~kgr~l~~p~~~~~RPT~~rvrEalFniL~~~~--~i~~~~~LDLFaGSGslglEAlSRGA~~v~fvE~~~~a 78 (181)
T pfam03602 1 MRIIGGKYKGRKLKVPPGPGTRPTTDRVREALFNILAPYF--ELGGARVLDLFAGSGALGLEALSRGASSVVFVEKDKKA 78 (181)
T ss_pred CEEECCCCCCCEECCCCCCCCCCCCHHHHHHHHHHHCCCC--CCCCCEEEECCCCCCHHHHHHHHCCCCEEEEEECCHHH
T ss_conf 9894524789882579999957684889999997501345--54898799827872698999997699889999699999
Q ss_pred HHHHHHHHCCCCCCCCHHHHHHHHHHHHHH-CCCCCCCCCCCCHHHHHCCHHHHHHHHHHCCCCCCCEEEEEECCCCCCC
Q ss_conf 566764200133221002234456654210-0344443101513431000288898887448888974999981778886
Q gi|254780405|r 84 IRLIRRNSELLGVEKNCNIFFRDVLRLGKI-GNISPFQLVYLDPPYGQGLAQQALAIIDKEGWLEPNALVIIEEYAGTCI 162 (189)
Q Consensus 84 ~~~lk~N~~~~~~~~~~~ii~~D~~~~~~~-~~~~~fDiIf~DPPY~~~~~~~~l~~l~~~~~L~~~gliiiE~~~~~~~ 162 (189)
T Consensus 79 ~~~i~~N~~~l~~~~~-~~~~~~~~~~~~~~~~~~~fdiIF~DPPY~~~~~~~~l~~l~~~~~l~~~~iiiiE~~~~~~~ 157 (181)
T pfam03602 79 VATLKENLEALGLEGA-VLRMDAARALLRLAGKGPPFDLVFLDPPYAKGLIEEALELLAEKGWLNPNALIVVETESDEEL 157 (181)
T ss_pred HHHHHHHHHHHCCCCE-EEECCHHHHHHHHCCCCCCCCEEECCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCC
T ss_conf 9999999998589977-998108999987533578887663599754206999999999666657980999996687786
Q ss_pred -CCCCCCEEEEEEECCCEEEEEEE
Q ss_conf -75788579998341856999865
Q gi|254780405|r 163 -SVGAAFHFLQERKYGDTKIYFFS 185 (189)
Q Consensus 163 -~~~~~~~~~~~k~yG~t~i~f~~ 185 (189)
T Consensus 158 ~~~~~~~~~~k~k~YG~t~i~f~k 181 (181)
T pfam03602 158 PEQPANLELVREKKYGQTKLAFYK 181 (181)
T ss_pred CCCCCCEEEEEEEECCCEEEEEEC
T ss_conf 668987089999944989999969