HHsearch alignment for GI: 254780405 and conserved domain: pfam05219
>pfam05219 DREV DREV methyltransferase. This family contains DREV protein homologues from several eukaryotes. The function of this protein is unknown. However, these proteins appear to be related to other methyltransferases (Bateman A pers obs).
Probab=96.12 E-value=0.0066 Score=38.09 Aligned_cols=89 Identities=17% Similarity=0.202 Sum_probs=56.5
Q ss_pred CCCEEEECCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCC---
Q ss_conf 89678611001222100110168733011100012356676420013322100223445665421003444431015---
Q gi|254780405|r 48 DSTRMLNIFAGTGSVGFEALSRGCHYVLFVDNNSESIRLIRRNSELLGVEKNCNIFFRDVLRLGKIGNISPFQLVYL--- 124 (189)
Q Consensus 48 ~~~~vlDlfaGsG~lgiEalSrGA~~v~~vE~~~~a~~~lk~N~~~~~~~~~~~ii~~D~~~~~~~~~~~~fDiIf~--- 124 (189)
T Consensus 94 ~~~~LLDlGAGdG~VT~~-la~~F~~V~aTE~S~~Mr~rL~~r----g----f~vl~--~~~~~~--~~~~fDvIscLNv 160 (265)
T pfam05219 94 EPVTLLDLGAGDGEITLR-MAPTFEEVYATELSWTMRDRLKKK----N----YNVLT--EIEWQE--TDVNLDLILCLNL 160 (265)
T ss_pred CCCEEEEECCCCCHHHHH-HHHHHCEEEEEECCHHHHHHHHHC----C----CEEEE--EHHCCC--CCCCEEEEHHHHH
T ss_conf 766478835899789999-997523588872789999999975----9----86875--012035--6874455422244
Q ss_pred -CHHHHHCCHHHHHHHHHHCCCCCCCEEEEE
Q ss_conf -134310002888988874488889749999
Q gi|254780405|r 125 -DPPYGQGLAQQALAIIDKEGWLEPNALVII 154 (189)
Q Consensus 125 -DPPY~~~~~~~~l~~l~~~~~L~~~gliii 154 (189)
T Consensus 161 LD---Rc~~P~~LL~~i~~--~L~P~G~lil 186 (265)
T pfam05219 161 LD---RCFDPFKLLEDIHL--ALAPNGRVIV 186 (265)
T ss_pred HH---CCCCHHHHHHHHHH--HCCCCCEEEE
T ss_conf 53---13886999999997--2499967999