RPSBLAST alignment for GI: 254780405 and conserved domain: TIGR00095

>gnl|CDD|129203 TIGR00095, TIGR00095, RNA methyltransferase, RsmD family. This model represents a family of uncharacterized bacterial proteins. Members are present in nearly every complete bacterial genome, always in a single copy. PSI-BLAST analysis shows homology to several families of SAM-dependent methyltransferases, including ribosomal RNA adenine dimethylases. Length = 189

 Score = 92.1 bits (229), Expect = 9e-20
 Identities = 50/184 (27%), Positives = 84/184 (45%), Gaps = 6/184 (3%)

Query: 3   KIRIIGGKFQRRLLHTPQNRSIRPSDSRTKKALFDILTHVYPVFLDSTRMLNIFAGTGSV 62
           K  IIGG    RLL  P   S RP+    ++  F+IL       +    +L++FAG+G +
Sbjct: 8   KRIIIGGWRGGRLLKLPPGGSTRPTTRVVRELFFNIL----RPEIQGAHLLDVFAGSGLL 63

Query: 63  GFEALSRGCHYVLFVDNNSESIRLIRRNSELLGVEKNCNIFFRDVLRLGKI--GNISPFQ 120
           G EALSRG       +++ ++ + ++ N  LL   +   +     LR  K      +   
Sbjct: 64  GEEALSRGAKVAFLEEDDRKANQTLKENLALLKSGEQAEVVRNSALRALKFLAKKPTFDN 123

Query: 121 LVYLDPPYGQGLAQQALAIIDKEGWLEPNALVIIEEYAGTCISVGAAFHFLQERKYGDTK 180
           ++YLDPP+  G  Q  L + +    LE   L+++EE     +    A+  L+ +K G   
Sbjct: 124 VIYLDPPFFNGALQALLELCENNWILEDTVLIVVEEDREPELPPVEAWLSLKRQKKGGVS 183

Query: 181 IYFF 184
              +
Sbjct: 184 YLLY 187