HHsearch alignment for GI: 254780406 and conserved domain: COG1189

>COG1189 Predicted rRNA methylase [Translation, ribosomal structure and biogenesis].
Probab=98.45  E-value=4.8e-07  Score=64.21  Aligned_cols=55  Identities=27%  Similarity=0.383  Sum_probs=50.3

Q ss_pred             CCHHHHHHHHHCCCC-CHHHHHHHHHCCCEEECCEECCCCCEEECCCCEEEECCEE
Q ss_conf             734478899988687-7899999998698699999924068780799979999989
Q gi|254780406|r   12 TPQRVSKVIARAGIA-SRREVERMIAQQRVKVNGILLERAAVNVMSTDHIEVDGVP   66 (354)
Q Consensus        12 ~~~RL~K~la~~g~~-SRr~a~~lI~~G~V~Vng~~v~~~~~~v~~~d~v~vdg~~   66 (354)
T Consensus         1 ~k~RLD~~Lv~rgl~~sR~~A~~~I~~G~V~Vng~~v~KP~~~V~~~~~i~v~~~~   56 (245)
T COG1189           1 NKMRLDALLVERGLFESREKAKELILAGNVLVNGEKVTKPSQLVDIDDEIEVKGEE   56 (245)
T ss_pred             CCCHHHHHHHHCCCHHHHHHHHHHHHCCEEEECCEEECCCCEECCCCCEEEECCCC
T ss_conf             93238999997353320999999987685788999942765245898637875666