HHsearch alignment for GI: 254780406 and conserved domain: COG1189
>COG1189 Predicted rRNA methylase [Translation, ribosomal structure and biogenesis].
Probab=98.45 E-value=4.8e-07 Score=64.21 Aligned_cols=55 Identities=27% Similarity=0.383 Sum_probs=50.3
Q ss_pred CCHHHHHHHHHCCCC-CHHHHHHHHHCCCEEECCEECCCCCEEECCCCEEEECCEE
Q ss_conf 734478899988687-7899999998698699999924068780799979999989
Q gi|254780406|r 12 TPQRVSKVIARAGIA-SRREVERMIAQQRVKVNGILLERAAVNVMSTDHIEVDGVP 66 (354)
Q Consensus 12 ~~~RL~K~la~~g~~-SRr~a~~lI~~G~V~Vng~~v~~~~~~v~~~d~v~vdg~~ 66 (354)
T Consensus 1 ~k~RLD~~Lv~rgl~~sR~~A~~~I~~G~V~Vng~~v~KP~~~V~~~~~i~v~~~~ 56 (245)
T COG1189 1 NKMRLDALLVERGLFESREKAKELILAGNVLVNGEKVTKPSQLVDIDDEIEVKGEE 56 (245)
T ss_pred CCCHHHHHHHHCCCHHHHHHHHHHHHCCEEEECCEEECCCCEECCCCCEEEECCCC
T ss_conf 93238999997353320999999987685788999942765245898637875666