HHsearch alignment for GI: 254780406 and conserved domain: COG2302

>COG2302 Uncharacterized conserved protein, contains S4-like domain [Function unknown].
Probab=98.22  E-value=1.7e-06  Score=60.79  Aligned_cols=58  Identities=26%  Similarity=0.370  Sum_probs=53.5

Q ss_pred             CCCCCCCHHHHHHHHHCCCCCHHHHHHHHHCCCEEECCEECCCCCEEECCCCEEEECC
Q ss_conf             4666773447889998868778999999986986999999240687807999799999
Q gi|254780406|r    7 VQENFTPQRVSKVIARAGIASRREVERMIAQQRVKVNGILLERAAVNVMSTDHIEVDG   64 (354)
Q Consensus         7 ~~~~~~~~RL~K~la~~g~~SRr~a~~lI~~G~V~Vng~~v~~~~~~v~~~d~v~vdg   64 (354)
T Consensus       174 ~~~~vsSlRLD~vis~~~~~SR~~a~~lIe~g~VkVN~k~v~~~s~~v~~GDliSirG  231 (257)
T COG2302         174 LDVTVSSLRLDVVISEGFGLSRAKAQQLIEKGKVKVNWKVVDKASYEVQEGDLISIRG  231 (257)
T ss_pred             EEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCEECCCCEEEEEC
T ss_conf             7654212407999998876559999998773732771299126663322498999840