HHsearch alignment for GI: 254780406 and conserved domain: COG2302
>COG2302 Uncharacterized conserved protein, contains S4-like domain [Function unknown].
Probab=98.22 E-value=1.7e-06 Score=60.79 Aligned_cols=58 Identities=26% Similarity=0.370 Sum_probs=53.5
Q ss_pred CCCCCCCHHHHHHHHHCCCCCHHHHHHHHHCCCEEECCEECCCCCEEECCCCEEEECC
Q ss_conf 4666773447889998868778999999986986999999240687807999799999
Q gi|254780406|r 7 VQENFTPQRVSKVIARAGIASRREVERMIAQQRVKVNGILLERAAVNVMSTDHIEVDG 64 (354)
Q Consensus 7 ~~~~~~~~RL~K~la~~g~~SRr~a~~lI~~G~V~Vng~~v~~~~~~v~~~d~v~vdg 64 (354)
T Consensus 174 ~~~~vsSlRLD~vis~~~~~SR~~a~~lIe~g~VkVN~k~v~~~s~~v~~GDliSirG 231 (257)
T COG2302 174 LDVTVSSLRLDVVISEGFGLSRAKAQQLIEKGKVKVNWKVVDKASYEVQEGDLISIRG 231 (257)
T ss_pred EEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCEECCCCEEEEEC
T ss_conf 7654212407999998876559999998773732771299126663322498999840